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The map label for this gene is fliF [H]

Identifier: 195952552

GI number: 195952552

Start: 154537

End: 156039

Strand: Direct

Name: fliF [H]

Synonym: HY04AAS1_0172

Alternate gene names: 195952552

Gene position: 154537-156039 (Clockwise)

Preceding gene: 195952551

Following gene: 195952553

Centisome position: 9.91

GC content: 37.52

Gene sequence:

>1503_bases
ATGGACTACAAAGAAATATTAAATAATTTAAAAGAGCGTTTCCAAGCTTTAAACAAAACTCAGCAAATTATAGTTTTGTC
TATACCTGTAGTTTTAGCGCTTTTAACTGGATTAATATTTTTTTTGACATCAAGAGTACATTATGCGGTCTTGTATGGAG
ATTTAAACAACAGAGACATGGCTGCCATAGCGGAGCAGCTTGAAAAAGACAACGTAAAATATAAAATAACTCAAGACGGT
AGGACAATTTTAGTCCCAAAGCAAGAAGCCAGACAGCTTAGATTAAAACTTGCTGCTATGGGGCTTCCGACAAAAGGCTA
TCCAGGTTTTAAGCTTTTAAACAAAATGCCTCTTGGAATGACAGATTTCATGCAACATGTAGAATATCAAAGAGCCCTAG
AAGAAGAGCTGTCAAATACGATATTAGGTTTTAGAAATATAGAAAAAGCAAAGGTAAATTTAGCTATACCAAAACCAAGC
ATATTTATAACCCAAAGCCAAAAACCCTCAGCTTCGGTATTTATAGAATTAAAACCGGGGGCTTCAATCACAAGACGTCA
GGTGATAGCTATAAGGAATTTGGTGGCCGCTAGTGTGCCCGATTTAACTCCCAACAGGGTGACTGTGGTTGATAGCAACG
GCGTGGACCTAACGGAAGAACTAAACAACCCCTCTTCCTATCTTACAAATGAACAGTTAAGGGTAAAAACAGATTTAGAA
AACTCCATAACAAAACATCTTGAACAAGTGTTGGGTCAGGCTCTTGGTTACAACAACGTTAGGGTTGCTGTGGATGTAGA
ACCAGATTTTTCTCAAGTGGAAACAAAATCAAAAAATTACAATCCGAACACTACAGCAATAGTTAGTCAACAGAAAAAAC
AAGAAACCACCACAGGTACCAGCGTATCCGGAGTACCAGGTACAGCTTCAAACATACCACCAATGAGTGGACTTAGACCA
AACGCCAATTTTCAATCTACGAAAAAAGAAGTTACTACAAACTACGATGTTAGTGTAGAAAAAACTCATGTTGTAGATAA
GACCATACGTATAAAGAGAATGAGTGTAGGCGTCATAGTAAACGCTGATCTTAAAAACGTGAATCTAAACAGTATAAGAC
AATTGGTAATTGCGGCGGCTGGGGTAGATCCAAAAAGAGGTGATACCGTATCTGTCATAGCGGTACCTTTTTATAGACCA
GTTGTACCGAAACCCCCTATATATGTTGTTTATGCAAAGTACGGTATAGCTGGTATCTTACTTCTTTTGTTGCTTGGAAT
ATTGCTTTTTGTATTCTTAAAAACCAGAAAAAAACCAGAAGTTCGAGAATTACCAGCTGTAAGTGCAGCTATGGAAGCTT
TAGAATCGCTTGAAACTGAAGAGCTAAGAGAAAAAGCCAAGGAGCTTATTACCGTTGATAAGATGATAAAGGTAACTAAG
GAAAATCCAGATAAGGTGGCAAAGATTATTAAGCATTGGCTTAGTAGCACCAAAAAGACTTAG

Upstream 100 bases:

>100_bases
TTTGATAAAGCTGGTGTGGTATTAAACTTGTTGGTGCAGGTGAGAAACAAGCTTTTAGATGCTTATCAGACTCTTATAAA
TACTCAAGTTTAAATAATCT

Downstream 100 bases:

>100_bases
AGGTGAACAACTATGGCTGAACAAGTATTAGGTCAGGAAGAGGTAGACCTTCTTTTAAAGTCTTTAGGCAAAGAAGAAGA
GGTAGAGGAAAAATCTTTAG

Product: flagellar M-ring protein FliF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MDYKEILNNLKERFQALNKTQQIIVLSIPVVLALLTGLIFFLTSRVHYAVLYGDLNNRDMAAIAEQLEKDNVKYKITQDG
RTILVPKQEARQLRLKLAAMGLPTKGYPGFKLLNKMPLGMTDFMQHVEYQRALEEELSNTILGFRNIEKAKVNLAIPKPS
IFITQSQKPSASVFIELKPGASITRRQVIAIRNLVAASVPDLTPNRVTVVDSNGVDLTEELNNPSSYLTNEQLRVKTDLE
NSITKHLEQVLGQALGYNNVRVAVDVEPDFSQVETKSKNYNPNTTAIVSQQKKQETTTGTSVSGVPGTASNIPPMSGLRP
NANFQSTKKEVTTNYDVSVEKTHVVDKTIRIKRMSVGVIVNADLKNVNLNSIRQLVIAAAGVDPKRGDTVSVIAVPFYRP
VVPKPPIYVVYAKYGIAGILLLLLLGILLFVFLKTRKKPEVRELPAVSAAMEALESLETEELREKAKELITVDKMIKVTK
ENPDKVAKIIKHWLSSTKKT

Sequences:

>Translated_500_residues
MDYKEILNNLKERFQALNKTQQIIVLSIPVVLALLTGLIFFLTSRVHYAVLYGDLNNRDMAAIAEQLEKDNVKYKITQDG
RTILVPKQEARQLRLKLAAMGLPTKGYPGFKLLNKMPLGMTDFMQHVEYQRALEEELSNTILGFRNIEKAKVNLAIPKPS
IFITQSQKPSASVFIELKPGASITRRQVIAIRNLVAASVPDLTPNRVTVVDSNGVDLTEELNNPSSYLTNEQLRVKTDLE
NSITKHLEQVLGQALGYNNVRVAVDVEPDFSQVETKSKNYNPNTTAIVSQQKKQETTTGTSVSGVPGTASNIPPMSGLRP
NANFQSTKKEVTTNYDVSVEKTHVVDKTIRIKRMSVGVIVNADLKNVNLNSIRQLVIAAAGVDPKRGDTVSVIAVPFYRP
VVPKPPIYVVYAKYGIAGILLLLLLGILLFVFLKTRKKPEVRELPAVSAAMEALESLETEELREKAKELITVDKMIKVTK
ENPDKVAKIIKHWLSSTKKT
>Mature_500_residues
MDYKEILNNLKERFQALNKTQQIIVLSIPVVLALLTGLIFFLTSRVHYAVLYGDLNNRDMAAIAEQLEKDNVKYKITQDG
RTILVPKQEARQLRLKLAAMGLPTKGYPGFKLLNKMPLGMTDFMQHVEYQRALEEELSNTILGFRNIEKAKVNLAIPKPS
IFITQSQKPSASVFIELKPGASITRRQVIAIRNLVAASVPDLTPNRVTVVDSNGVDLTEELNNPSSYLTNEQLRVKTDLE
NSITKHLEQVLGQALGYNNVRVAVDVEPDFSQVETKSKNYNPNTTAIVSQQKKQETTTGTSVSGVPGTASNIPPMSGLRP
NANFQSTKKEVTTNYDVSVEKTHVVDKTIRIKRMSVGVIVNADLKNVNLNSIRQLVIAAAGVDPKRGDTVSVIAVPFYRP
VVPKPPIYVVYAKYGIAGILLLLLLGILLFVFLKTRKKPEVRELPAVSAAMEALESLETEELREKAKELITVDKMIKVTK
ENPDKVAKIIKHWLSSTKKT

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=407, Percent_Identity=32.4324324324324, Blast_Score=209, Evalue=3e-55,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 55593; Mature: 55593

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYKEILNNLKERFQALNKTQQIIVLSIPVVLALLTGLIFFLTSRVHYAVLYGDLNNRDM
CCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHH
AAIAEQLEKDNVKYKITQDGRTILVPKQEARQLRLKLAAMGLPTKGYPGFKLLNKMPLGM
HHHHHHHHHCCCEEEEECCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCH
TDFMQHVEYQRALEEELSNTILGFRNIEKAKVNLAIPKPSIFITQSQKPSASVFIELKPG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEECCC
ASITRRQVIAIRNLVAASVPDLTPNRVTVVDSNGVDLTEELNNPSSYLTNEQLRVKTDLE
CCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHCCCCHHHHCCCCEEEEECHH
NSITKHLEQVLGQALGYNNVRVAVDVEPDFSQVETKSKNYNPNTTAIVSQQKKQETTTGT
HHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCCCCCCEEEECCHHHHHCCCCC
SVSGVPGTASNIPPMSGLRPNANFQSTKKEVTTNYDVSVEKTHVVDKTIRIKRMSVGVIV
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEHHHHHHHHEEEEEEEEEEEE
NADLKNVNLNSIRQLVIAAAGVDPKRGDTVSVIAVPFYRPVVPKPPIYVVYAKYGIAGIL
ECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEHHHHHHHH
LLLLLGILLFVFLKTRKKPEVRELPAVSAAMEALESLETEELREKAKELITVDKMIKVTK
HHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
ENPDKVAKIIKHWLSSTKKT
CCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDYKEILNNLKERFQALNKTQQIIVLSIPVVLALLTGLIFFLTSRVHYAVLYGDLNNRDM
CCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHH
AAIAEQLEKDNVKYKITQDGRTILVPKQEARQLRLKLAAMGLPTKGYPGFKLLNKMPLGM
HHHHHHHHHCCCEEEEECCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCH
TDFMQHVEYQRALEEELSNTILGFRNIEKAKVNLAIPKPSIFITQSQKPSASVFIELKPG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEECCC
ASITRRQVIAIRNLVAASVPDLTPNRVTVVDSNGVDLTEELNNPSSYLTNEQLRVKTDLE
CCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHCCCCHHHHCCCCEEEEECHH
NSITKHLEQVLGQALGYNNVRVAVDVEPDFSQVETKSKNYNPNTTAIVSQQKKQETTTGT
HHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCCCCCCEEEECCHHHHHCCCCC
SVSGVPGTASNIPPMSGLRPNANFQSTKKEVTTNYDVSVEKTHVVDKTIRIKRMSVGVIV
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEHHHHHHHHEEEEEEEEEEEE
NADLKNVNLNSIRQLVIAAAGVDPKRGDTVSVIAVPFYRPVVPKPPIYVVYAKYGIAGIL
ECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEHHHHHHHH
LLLLLGILLFVFLKTRKKPEVRELPAVSAAMEALESLETEELREKAKELITVDKMIKVTK
HHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
ENPDKVAKIIKHWLSSTKKT
CCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]