Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is yhgH [C]

Identifier: 195952468

GI number: 195952468

Start: 81425

End: 82123

Strand: Direct

Name: yhgH [C]

Synonym: HY04AAS1_0088

Alternate gene names: 195952468

Gene position: 81425-82123 (Clockwise)

Preceding gene: 195952467

Following gene: 195952469

Centisome position: 5.22

GC content: 30.76

Gene sequence:

>699_bases
ATGTACTTATCAAAATACCTACGGATAAAGAGCCAAATAGCTAAGATTTTTGACAAACTTTACATACCAGACAACGTTTG
TCTTAGTTGTAACAACTATTTTAAGCCGACGCTTCAGGGTTATGTTTGCGATGATTGTATAGCATCTATAAAACCTATGC
TTTTTGAAAAAGAAACTCTTCCTTACATAGATTCCTATAGGATTTTTAGTAGCTACGATAAAGCTTTAAAAGAAATGATA
ATCGCCTTAAAATTTAAGAAAGCCTCTTTGTTTGCAAAAATAATAGGTGATATTGTGAAAGATGATTTTTTTGCTTTTGT
AAAATCTATAAACCCTGATATTGTTACCTATGTGCCAGTTTCTTTCTTTAGATTTTGGCAAAGGGGCTATGACCAGAACG
ATATCTTATTAAAAGCTTTAAACGCTCAATACATATCTATTTTGAAACGTAGAAGACATGCTAAACCTCTATCTCTTAGC
ATGGATAAAAATCAAAGAGAACACATTGTTTCTAAGGCTTTTAAGATAAGAAAAGAATTTGTATTTAATTTAGAAGGTAA
AAAAGTTTTAGTCTTTGATGATATATTAACTACAGGAGCTACTGCTACTCAAATAGCGAGAACCCTTAAGATGCACGCTG
TAAAAGAAGTTTATTTTTATTTTATAGCGTCCCATAAAAGAGCTATTGATATGGTATAA

Upstream 100 bases:

>100_bases
ATAATGGCAAACATGGGGAAAATTCCAAAAGAAGGCGATGAGTTTGAATACAAAGGTTTTAAGTTTATAGTGGATAAAAT
GGATGGTAAAAAGATAGAGC

Downstream 100 bases:

>100_bases
TAATTTTAATCAAAAGCTGGAGGTATATAACTATGAACGATGAAGTGCTTTTAAAAGTGGAGGAGAAGATAAACCCACCA
TCTCGCATATTGGAGGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Amidophosphoribosyltransferase-Like Protein; Competence Protein F; COMF Operon; Phosphoribosyl Transferase Domain Protein; Competence Protein ComFC; ComF Protein

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MYLSKYLRIKSQIAKIFDKLYIPDNVCLSCNNYFKPTLQGYVCDDCIASIKPMLFEKETLPYIDSYRIFSSYDKALKEMI
IALKFKKASLFAKIIGDIVKDDFFAFVKSINPDIVTYVPVSFFRFWQRGYDQNDILLKALNAQYISILKRRRHAKPLSLS
MDKNQREHIVSKAFKIRKEFVFNLEGKKVLVFDDILTTGATATQIARTLKMHAVKEVYFYFIASHKRAIDMV

Sequences:

>Translated_232_residues
MYLSKYLRIKSQIAKIFDKLYIPDNVCLSCNNYFKPTLQGYVCDDCIASIKPMLFEKETLPYIDSYRIFSSYDKALKEMI
IALKFKKASLFAKIIGDIVKDDFFAFVKSINPDIVTYVPVSFFRFWQRGYDQNDILLKALNAQYISILKRRRHAKPLSLS
MDKNQREHIVSKAFKIRKEFVFNLEGKKVLVFDDILTTGATATQIARTLKMHAVKEVYFYFIASHKRAIDMV
>Mature_232_residues
MYLSKYLRIKSQIAKIFDKLYIPDNVCLSCNNYFKPTLQGYVCDDCIASIKPMLFEKETLPYIDSYRIFSSYDKALKEMI
IALKFKKASLFAKIIGDIVKDDFFAFVKSINPDIVTYVPVSFFRFWQRGYDQNDILLKALNAQYISILKRRRHAKPLSLS
MDKNQREHIVSKAFKIRKEFVFNLEGKKVLVFDDILTTGATATQIARTLKMHAVKEVYFYFIASHKRAIDMV

Specific function: Unknown

COG id: COG1040

COG function: function code R; Predicted amidophosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27112; Mature: 27112

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS00103 PUR_PYR_PR_TRANSFER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLSKYLRIKSQIAKIFDKLYIPDNVCLSCNNYFKPTLQGYVCDDCIASIKPMLFEKETL
CCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCC
PYIDSYRIFSSYDKALKEMIIALKFKKASLFAKIIGDIVKDDFFAFVKSINPDIVTYVPV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH
SFFRFWQRGYDQNDILLKALNAQYISILKRRRHAKPLSLSMDKNQREHIVSKAFKIRKEF
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHH
VFNLEGKKVLVFDDILTTGATATQIARTLKMHAVKEVYFYFIASHKRAIDMV
HEECCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure
MYLSKYLRIKSQIAKIFDKLYIPDNVCLSCNNYFKPTLQGYVCDDCIASIKPMLFEKETL
CCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCC
PYIDSYRIFSSYDKALKEMIIALKFKKASLFAKIIGDIVKDDFFAFVKSINPDIVTYVPV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH
SFFRFWQRGYDQNDILLKALNAQYISILKRRRHAKPLSLSMDKNQREHIVSKAFKIRKEF
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHH
VFNLEGKKVLVFDDILTTGATATQIARTLKMHAVKEVYFYFIASHKRAIDMV
HEECCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA