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The map label for this gene is 195952450

Identifier: 195952450

GI number: 195952450

Start: 64714

End: 65238

Strand: Direct

Name: 195952450

Synonym: HY04AAS1_0070

Alternate gene names: NA

Gene position: 64714-65238 (Clockwise)

Preceding gene: 195952449

Following gene: 195952451

Centisome position: 4.15

GC content: 31.81

Gene sequence:

>525_bases
ATGAAGCTGTATAGTCTTTTATTGGATAAGACTTATAAGCCTTTGACACTCCTTGATTATAGAAAATCTTTCTTGTTAGA
ATATACACAAAGGGCTACGGTGCTTGAATACCATCCAGAAGCTGTAATAAGATCTACTTACAGAACTTACAAAGTACCCA
TTGTACTCAAAACCAACGCTTTATCAAAAACTTTTTATAAGAATATACCCACTAGGTACAACGTCTATGTAAGAGATAAC
TTCACTTGTGGTTATTGCGGTAAGGTGTGTGATGATAGCGAGATTACGGTAGACCATATAATACCTGTATCAAAGGGTGG
TAAATGGACTTGGGATAATCTTGTTACTGCTTGTGAATCTTGCAATGCAAGTAAATCTGACAATATTATAATGCCAATTT
ATATTAAACCCCATAAACCTCAATATTTTACATTGCTTTTAAAAGAACATTTGAAAAAAATTGATGAAACTACGTTAAAT
ATTATAAAGCCTTATTGCTATCAATATTTAAAAGAGATTTCTTGA

Upstream 100 bases:

>100_bases
CCACAGATAGGAGGATATTCGCAAAGGGCTCTTTGGAGGCTGCCAAATGGGTTTATAGAAAACCTGCGGGCTTTTATTCA
ATGTTTGATGTGCTTGGCTT

Downstream 100 bases:

>100_bases
GCTTTAGTTTTATGCTATAATATTAGCTTAAAACATTTGTAAAGGAGTTATGATATGGCGGCATGTTTTGTTTGCAATAA
AAAGGCTGTTTATGGGAAAA

Product: HNH endonuclease

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; HNH Endonuclease Domain-Containing Protein; Restriction Endonuclease; HNH Endonuclease Domain Protein; HNH Nuclease; Hnh Endonuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKLYSLLLDKTYKPLTLLDYRKSFLLEYTQRATVLEYHPEAVIRSTYRTYKVPIVLKTNALSKTFYKNIPTRYNVYVRDN
FTCGYCGKVCDDSEITVDHIIPVSKGGKWTWDNLVTACESCNASKSDNIIMPIYIKPHKPQYFTLLLKEHLKKIDETTLN
IIKPYCYQYLKEIS

Sequences:

>Translated_174_residues
MKLYSLLLDKTYKPLTLLDYRKSFLLEYTQRATVLEYHPEAVIRSTYRTYKVPIVLKTNALSKTFYKNIPTRYNVYVRDN
FTCGYCGKVCDDSEITVDHIIPVSKGGKWTWDNLVTACESCNASKSDNIIMPIYIKPHKPQYFTLLLKEHLKKIDETTLN
IIKPYCYQYLKEIS
>Mature_174_residues
MKLYSLLLDKTYKPLTLLDYRKSFLLEYTQRATVLEYHPEAVIRSTYRTYKVPIVLKTNALSKTFYKNIPTRYNVYVRDN
FTCGYCGKVCDDSEITVDHIIPVSKGGKWTWDNLVTACESCNASKSDNIIMPIYIKPHKPQYFTLLLKEHLKKIDETTLN
IIKPYCYQYLKEIS

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20430; Mature: 20430

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLYSLLLDKTYKPLTLLDYRKSFLLEYTQRATVLEYHPEAVIRSTYRTYKVPIVLKTNA
CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHEEEEEEEEECCC
LSKTFYKNIPTRYNVYVRDNFTCGYCGKVCDDSEITVDHIIPVSKGGKWTWDNLVTACES
HHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEHHHEEECCCCCCEEHHHHHHHHHH
CNASKSDNIIMPIYIKPHKPQYFTLLLKEHLKKIDETTLNIIKPYCYQYLKEIS
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLYSLLLDKTYKPLTLLDYRKSFLLEYTQRATVLEYHPEAVIRSTYRTYKVPIVLKTNA
CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHEEEEEEEEECCC
LSKTFYKNIPTRYNVYVRDNFTCGYCGKVCDDSEITVDHIIPVSKGGKWTWDNLVTACES
HHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEHHHEEECCCCCCEEHHHHHHHHHH
CNASKSDNIIMPIYIKPHKPQYFTLLLKEHLKKIDETTLNIIKPYCYQYLKEIS
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA