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The map label for this gene is 194737470

Identifier: 194737470

GI number: 194737470

Start: 310621

End: 311115

Strand: Reverse

Name: 194737470

Synonym: SeSA_A0299

Alternate gene names: NA

Gene position: 311115-310621 (Counterclockwise)

Preceding gene: 194738070

Following gene: 194736842

Centisome position: 6.61

GC content: 55.76

Gene sequence:

>495_bases
ATGAGCACGTCTCGTTTTACACCCGCTAACCACCTGCTGCCCACCCTATTTGATCGGCTGTGTGACAATGCTCCGTATCA
GAAAATTGACCGGGGTATCAGCGTCACGCCGGTACAACTGAAGGAGATCATTCGTCGGGATCTCTCCTTTTTGCTCAATA
CCATTAGCCACGAAGGTGACATCGACGCCCGGCGCTATCCGCAGGCGGCGGCGTCAGTGCTCAACTATGGCCTGCCGCCG
CTGGCGGGCAGCTTTATGTATGAGCATAAGTGGGACGATATCAGCGAGGCGATCCGGCGCGCCATTATCCGTTTCGAACC
CCGGCTGAACGCCGCCACACTCAGGGTCACGCCCTTGCTCGATAAAACCCGGCAGGGTAGCTATAACACGCTACAGTTTG
AAATTCGCGGACAAATTCTGACGCAGCCGTATCCCACGGAGTTTCTGGTACGCAGCGCGCTGGATATGGAGCTGAGCCGC
ATTACGTTCTTTTAA

Upstream 100 bases:

>100_bases
TGCGGGCGCTGGGGCAGAAAGTGTGGCTGACCAGCCACGGCGATATCAGCCTGCTGGACATGGCCCATTGTACCTTTCAT
GCTCAGGAAAACGATGGCGC

Downstream 100 bases:

>100_bases
TACAGGGCATTATTCATGGATCCACGGCTACTGGAGTATTACAACCGCGAACTGAGCTACCTGCGGGAGACTGGTGCTGA
GTTCGCCACCCTCCATCCCA

Product: type VI secretion system lysozyme-related protein

Products: NA

Alternate protein names: GPW/Gp25 Family Protein; Cytoplasmic Protein; Replication/Virulence Associated Protein; T6SS Lysozyme-Related D; Cytoplasmic Protein SciD; Type VI Secretion System Lysozyme-Related Family Protein; Type VI Secretion System Lysozyme-Like Protein; Type VI Secretion System Core Protein; Type VI Secretion System Protein ImpF; Type VI Secretion System Lysozyme-Related Family

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MSTSRFTPANHLLPTLFDRLCDNAPYQKIDRGISVTPVQLKEIIRRDLSFLLNTISHEGDIDARRYPQAAASVLNYGLPP
LAGSFMYEHKWDDISEAIRRAIIRFEPRLNAATLRVTPLLDKTRQGSYNTLQFEIRGQILTQPYPTEFLVRSALDMELSR
ITFF

Sequences:

>Translated_164_residues
MSTSRFTPANHLLPTLFDRLCDNAPYQKIDRGISVTPVQLKEIIRRDLSFLLNTISHEGDIDARRYPQAAASVLNYGLPP
LAGSFMYEHKWDDISEAIRRAIIRFEPRLNAATLRVTPLLDKTRQGSYNTLQFEIRGQILTQPYPTEFLVRSALDMELSR
ITFF
>Mature_163_residues
STSRFTPANHLLPTLFDRLCDNAPYQKIDRGISVTPVQLKEIIRRDLSFLLNTISHEGDIDARRYPQAAASVLNYGLPPL
AGSFMYEHKWDDISEAIRRAIIRFEPRLNAATLRVTPLLDKTRQGSYNTLQFEIRGQILTQPYPTEFLVRSALDMELSRI
TFF

Specific function: Unknown

COG id: COG3518

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18858; Mature: 18727

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSRFTPANHLLPTLFDRLCDNAPYQKIDRGISVTPVQLKEIIRRDLSFLLNTISHEGD
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
IDARRYPQAAASVLNYGLPPLAGSFMYEHKWDDISEAIRRAIIRFEPRLNAATLRVTPLL
CCHHHCHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEHHH
DKTRQGSYNTLQFEIRGQILTQPYPTEFLVRSALDMELSRITFF
HHHCCCCCCEEEEEEECEEECCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STSRFTPANHLLPTLFDRLCDNAPYQKIDRGISVTPVQLKEIIRRDLSFLLNTISHEGD
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
IDARRYPQAAASVLNYGLPPLAGSFMYEHKWDDISEAIRRAIIRFEPRLNAATLRVTPLL
CCHHHCHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEHHH
DKTRQGSYNTLQFEIRGQILTQPYPTEFLVRSALDMELSRITFF
HHHCCCCCCEEEEEEECEEECCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA