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The map label for this gene is myfB [H]

Identifier: 194736071

GI number: 194736071

Start: 206546

End: 207229

Strand: Reverse

Name: myfB [H]

Synonym: SeSA_A0195

Alternate gene names: 194736071

Gene position: 207229-206546 (Counterclockwise)

Preceding gene: 194738133

Following gene: 194736076

Centisome position: 4.4

GC content: 53.65

Gene sequence:

>684_bases
ATGAATTCATTGGCTAAAGCAGGGTTGCTTTGTTGCCTGTTGTGCGGTTCGCTGGCGCATGCCGCAGGGATAAACATCGG
CGCAACGCGGGTTATTTTTCACGGCGATGCCAAAGATGCATCCATATCGATAAGCAATAGCGACAACGTTCCCTATTTAA
TTCAGTCCTGGGCGCAATCGATCAGCGAAACCGGGGCGATCGGCGATGCGCCGTTTATGGTCACCCCGCCGCTTTTTCGC
CTTAATGGCGGGCAAAAGAACGTACTGCGAATTATCCGTACCGGCGGCAATTTGCCGGAAGATCGCGAGTCGCTGTACTG
GCTGGATATTAAATCGATTCCCAGCAGCAATCCGGACAATAAGCACAATACGCTCATGCTGGCCGTTAAAGCGGAATTTA
AGCTGATTTACCGGCCAAAAGCGTTAACCCAAAAGCCAGAAGAGGTTGCCGATCGGTTAACGTGGTCGCGTCAGGGTCGC
ACGCTCACCGTGAAGAACCCCACGCCCTATTATATGAACTTCGCCACCCTTTCCGTTGGCAGTCAAAAAATAAAAGCCCC
GCGCTATGTGGCGCCTTTCGGCAACGCGCAGTACACGCTGCCTGCCGCCGCCAGCGGCCCGATCGCCTGGTCTATCATCA
ACGATTTTGGCGGTACTGGCCCCGAACATAAACAAACGCCTTGA

Upstream 100 bases:

>100_bases
TTGGGTCGGGAAATGTCGATGCAAGCGCAACATTCTATCTGCAATATAACTGATCCTGGCGGCCAGCGTCGGCTGGCCCA
TTTGTTTATTGAGGTCATCA

Downstream 100 bases:

>100_bases
GAAGAGTGACAGGGATGAGAGTGCCGATGCGCAAAGGGCAACACAGGGGATTTTATTTATCGCGCTGCGCTGTGTGTATC
GCGCTGGGCAGCACGTTCGC

Product: chaperone protein FimC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MNSLAKAGLLCCLLCGSLAHAAGINIGATRVIFHGDAKDASISISNSDNVPYLIQSWAQSISETGAIGDAPFMVTPPLFR
LNGGQKNVLRIIRTGGNLPEDRESLYWLDIKSIPSSNPDNKHNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWSRQGR
TLTVKNPTPYYMNFATLSVGSQKIKAPRYVAPFGNAQYTLPAAASGPIAWSIINDFGGTGPEHKQTP

Sequences:

>Translated_227_residues
MNSLAKAGLLCCLLCGSLAHAAGINIGATRVIFHGDAKDASISISNSDNVPYLIQSWAQSISETGAIGDAPFMVTPPLFR
LNGGQKNVLRIIRTGGNLPEDRESLYWLDIKSIPSSNPDNKHNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWSRQGR
TLTVKNPTPYYMNFATLSVGSQKIKAPRYVAPFGNAQYTLPAAASGPIAWSIINDFGGTGPEHKQTP
>Mature_227_residues
MNSLAKAGLLCCLLCGSLAHAAGINIGATRVIFHGDAKDASISISNSDNVPYLIQSWAQSISETGAIGDAPFMVTPPLFR
LNGGQKNVLRIIRTGGNLPEDRESLYWLDIKSIPSSNPDNKHNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWSRQGR
TLTVKNPTPYYMNFATLSVGSQKIKAPRYVAPFGNAQYTLPAAASGPIAWSIINDFGGTGPEHKQTP

Specific function: Required for the biogenesis of the myfA fimbria [H]

COG id: COG3121

COG function: function code NU; P pilus assembly protein, chaperone PapD

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI1790771, Length=223, Percent_Identity=38.5650224215247, Blast_Score=160, Evalue=8e-41,
Organism=Escherichia coli, GI1786743, Length=217, Percent_Identity=40.0921658986175, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI1789532, Length=214, Percent_Identity=37.8504672897196, Blast_Score=154, Evalue=4e-39,
Organism=Escherichia coli, GI1787171, Length=224, Percent_Identity=34.375, Blast_Score=137, Evalue=5e-34,
Organism=Escherichia coli, GI1786333, Length=229, Percent_Identity=31.4410480349345, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1786936, Length=221, Percent_Identity=33.0316742081448, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI87081806, Length=227, Percent_Identity=32.15859030837, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1788677, Length=211, Percent_Identity=30.8056872037915, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1788428, Length=218, Percent_Identity=26.605504587156, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI87082203, Length=230, Percent_Identity=28.695652173913, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR001829
- InterPro:   IPR016148
- InterPro:   IPR018046
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 24596; Mature: 24596

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLAKAGLLCCLLCGSLAHAAGINIGATRVIFHGDAKDASISISNSDNVPYLIQSWAQS
CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEECCCCCCCHHHHHHHHH
ISETGAIGDAPFMVTPPLFRLNGGQKNVLRIIRTGGNLPEDRESLYWLDIKSIPSSNPDN
HHHCCCCCCCCEEECCCEEEECCCHHHHHHHEECCCCCCCCCCCEEEEEEECCCCCCCCC
KHNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWSRQGRTLTVKNPTPYYMNFATLSVG
CCCEEEEEEEEEEEEEECCHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEEECC
SQKIKAPRYVAPFGNAQYTLPAAASGPIAWSIINDFGGTGPEHKQTP
CHHHCCCEEECCCCCCEEEECCCCCCCEEEEEEHHCCCCCCCCCCCC
>Mature Secondary Structure
MNSLAKAGLLCCLLCGSLAHAAGINIGATRVIFHGDAKDASISISNSDNVPYLIQSWAQS
CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEECCCCCCCHHHHHHHHH
ISETGAIGDAPFMVTPPLFRLNGGQKNVLRIIRTGGNLPEDRESLYWLDIKSIPSSNPDN
HHHCCCCCCCCEEECCCEEEECCCHHHHHHHEECCCCCCCCCCCEEEEEEECCCCCCCCC
KHNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWSRQGRTLTVKNPTPYYMNFATLSVG
CCCEEEEEEEEEEEEEECCHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEEECC
SQKIKAPRYVAPFGNAQYTLPAAASGPIAWSIINDFGGTGPEHKQTP
CHHHCCCEEECCCCCCEEEECCCCCCCEEEEEEHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8105362 [H]