| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is creD [H]
Identifier: 194735853
GI number: 194735853
Start: 4698046
End: 4699395
Strand: Direct
Name: creD [H]
Synonym: SeSA_A4841
Alternate gene names: 194735853
Gene position: 4698046-4699395 (Clockwise)
Preceding gene: 194735190
Following gene: 194736168
Centisome position: 99.77
GC content: 53.33
Gene sequence:
>1350_bases ATGTTGAAATCCCCCCTGTTGTGGAAAATGATTACGTTAGGCGGCGCCATGATCCTGCTGTTAATTCCCCTGATGATGGT ACGGCACACCATCGTGGAACGTGCTGATTATCGAAGCCATGTAGAAGCCGCTATTCGTCAGAGTACCAGCGGCCCGCAAA AGGTTGTCGGCCCGCTGGTGGCGGTTCCGGTGACAGAGCTCTATACCGTGCTGGAAGAGGAGAAAGAGGTCCAGTATAAG CGCAGCTATCTCTATTTTTGGCTGCCAGAGTCGCTATTGGTTGAAGGCAATCAAAACGTTGAAGCGCGAAAAATAGGTAT TTATCAGGGGCAGGTGTGGCATACCGATATGGCGATAAAGGCAGAGTTTGATGTGGCCCGTCTGCATGAGCTGAACAGAC CGAACATTACCCTTGGAAAGCCCTTTATCGTCGTAGGCGTCGGCGATGCGCGCGGTATCAGCGCAGTAAAAGCGCCGCAG GTGAATGGTGAAACGCTCACTGTAGAACCGGGGACCGGCTTACCGGAAAGTAGAGAGGGCATTCATATCCCGCTGCCGGA CAGTCAGTGGGCGACGCGCAACCTGACGTTGGCGATGTCGCTAAATTTAAGCGGAACCGGCAGCTTTTCACTGGTTCCCG TCGGGCGTAGCAGTGAAATGACCCTGACCAGCAACTGGCCGCACCCAAATTTTGTGGGGGATTTTCTTCCCGGTAAACGC GAAATCAGCGGTTCAGGATTTCAGGCCCAGTGGCAAACCAGCCGGTTTGCCACGAATCTCGGCGAACGGTTTGCTGATGT GCAAAAGGTGGATTGGGACAACTTACCGGCGTTTAGCGTCGCTGTATCGACGCCAGCCGATCAGTATCAACTGACGGACA GAGCGACGAAATATGCCATTTTGTTGATTGCGCTAACGTTTATGGCTTTCTTTGTCTTCGAAACCCTGACGGGACAGCGG TTACACCCGATGCAGTATCTGCTGGTGGGGTTATCGCTGGTGATGTTCTACCTGCTGTTGCTGGCACTGTCGGAACATAT CGGTTTCACGCCAGCCTGGATCGCCGCAAGCCTGGTGGGCGCGTTGATGAATAGCGTTTATTTGCAGGCGGTGCTGAAAG GATGGCGCAATAGCGTGCTGTTTACGTTAGCGTTATTGGCGCTGGATGGCGTGATGTGGGGATTGCTGCGTTCGGAAGAT AGCTCGTTGCTTCTGGGTACCGGCGTTCTGCTACTGGCGCTTGGCGGCGTGATGTTCCTGACGCGCCATCTGGACTGGTA TTCGCTCTCTTGTCAGCAACGTAAGTCATTACCGCCAGTAAAAGATGACGAATTACGTTTGTGGAAATAA
Upstream 100 bases:
>100_bases CGGCGTGCTGGCCTCGTTGACACTTCACCGTCACTTCACATAACTTCAAATTCTCCCCACATCGCGTTCTTACACTGCTG GCATTGCAAAGGAGAACGCT
Downstream 100 bases:
>100_bases ATCTAACGGGCGCGCGCGTTAACGTTTTCCCGCGCAGCGCCAGAAACTGTGATGCCGTTAGTTATAGGTCAGGTTTAATG TTGCCGTGGCATTCGCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MLKSPLLWKMITLGGAMILLLIPLMMVRHTIVERADYRSHVEAAIRQSTSGPQKVVGPLVAVPVTELYTVLEEEKEVQYK RSYLYFWLPESLLVEGNQNVEARKIGIYQGQVWHTDMAIKAEFDVARLHELNRPNITLGKPFIVVGVGDARGISAVKAPQ VNGETLTVEPGTGLPESREGIHIPLPDSQWATRNLTLAMSLNLSGTGSFSLVPVGRSSEMTLTSNWPHPNFVGDFLPGKR EISGSGFQAQWQTSRFATNLGERFADVQKVDWDNLPAFSVAVSTPADQYQLTDRATKYAILLIALTFMAFFVFETLTGQR LHPMQYLLVGLSLVMFYLLLLALSEHIGFTPAWIAASLVGALMNSVYLQAVLKGWRNSVLFTLALLALDGVMWGLLRSED SSLLLGTGVLLLALGGVMFLTRHLDWYSLSCQQRKSLPPVKDDELRLWK
Sequences:
>Translated_449_residues MLKSPLLWKMITLGGAMILLLIPLMMVRHTIVERADYRSHVEAAIRQSTSGPQKVVGPLVAVPVTELYTVLEEEKEVQYK RSYLYFWLPESLLVEGNQNVEARKIGIYQGQVWHTDMAIKAEFDVARLHELNRPNITLGKPFIVVGVGDARGISAVKAPQ VNGETLTVEPGTGLPESREGIHIPLPDSQWATRNLTLAMSLNLSGTGSFSLVPVGRSSEMTLTSNWPHPNFVGDFLPGKR EISGSGFQAQWQTSRFATNLGERFADVQKVDWDNLPAFSVAVSTPADQYQLTDRATKYAILLIALTFMAFFVFETLTGQR LHPMQYLLVGLSLVMFYLLLLALSEHIGFTPAWIAASLVGALMNSVYLQAVLKGWRNSVLFTLALLALDGVMWGLLRSED SSLLLGTGVLLLALGGVMFLTRHLDWYSLSCQQRKSLPPVKDDELRLWK >Mature_449_residues MLKSPLLWKMITLGGAMILLLIPLMMVRHTIVERADYRSHVEAAIRQSTSGPQKVVGPLVAVPVTELYTVLEEEKEVQYK RSYLYFWLPESLLVEGNQNVEARKIGIYQGQVWHTDMAIKAEFDVARLHELNRPNITLGKPFIVVGVGDARGISAVKAPQ VNGETLTVEPGTGLPESREGIHIPLPDSQWATRNLTLAMSLNLSGTGSFSLVPVGRSSEMTLTSNWPHPNFVGDFLPGKR EISGSGFQAQWQTSRFATNLGERFADVQKVDWDNLPAFSVAVSTPADQYQLTDRATKYAILLIALTFMAFFVFETLTGQR LHPMQYLLVGLSLVMFYLLLLALSEHIGFTPAWIAASLVGALMNSVYLQAVLKGWRNSVLFTLALLALDGVMWGLLRSED SSLLLGTGVLLLALGGVMFLTRHLDWYSLSCQQRKSLPPVKDDELRLWK
Specific function: Unknown
COG id: COG4452
COG function: function code V; Inner membrane protein involved in colicin E2 resistance
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790862, Length=450, Percent_Identity=74, Blast_Score=663, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010364 [H]
Pfam domain/function: PF06123 CreD [H]
EC number: NA
Molecular weight: Translated: 49898; Mature: 49898
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKSPLLWKMITLGGAMILLLIPLMMVRHTIVERADYRSHVEAAIRQSTSGPQKVVGPLV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AVPVTELYTVLEEEKEVQYKRSYLYFWLPESLLVEGNQNVEARKIGIYQGQVWHTDMAIK HHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHEECCCCCCCEEEEEEEECCEEECCEEEE AEFDVARLHELNRPNITLGKPFIVVGVGDARGISAVKAPQVNGETLTVEPGTGLPESREG ECCCHHHHHHCCCCCEEECCCEEEEECCCCCCCCCEECCCCCCCEEEECCCCCCCCCCCC IHIPLPDSQWATRNLTLAMSLNLSGTGSFSLVPVGRSSEMTLTSNWPHPNFVGDFLPGKR EEECCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCC EISGSGFQAQWQTSRFATNLGERFADVQKVDWDNLPAFSVAVSTPADQYQLTDRATKYAI CCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH LLIALTFMAFFVFETLTGQRLHPMQYLLVGLSLVMFYLLLLALSEHIGFTPAWIAASLVG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ALMNSVYLQAVLKGWRNSVLFTLALLALDGVMWGLLRSEDSSLLLGTGVLLLALGGVMFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHH TRHLDWYSLSCQQRKSLPPVKDDELRLWK HHCCCCEECCHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MLKSPLLWKMITLGGAMILLLIPLMMVRHTIVERADYRSHVEAAIRQSTSGPQKVVGPLV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AVPVTELYTVLEEEKEVQYKRSYLYFWLPESLLVEGNQNVEARKIGIYQGQVWHTDMAIK HHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHEECCCCCCCEEEEEEEECCEEECCEEEE AEFDVARLHELNRPNITLGKPFIVVGVGDARGISAVKAPQVNGETLTVEPGTGLPESREG ECCCHHHHHHCCCCCEEECCCEEEEECCCCCCCCCEECCCCCCCEEEECCCCCCCCCCCC IHIPLPDSQWATRNLTLAMSLNLSGTGSFSLVPVGRSSEMTLTSNWPHPNFVGDFLPGKR EEECCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCC EISGSGFQAQWQTSRFATNLGERFADVQKVDWDNLPAFSVAVSTPADQYQLTDRATKYAI CCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH LLIALTFMAFFVFETLTGQRLHPMQYLLVGLSLVMFYLLLLALSEHIGFTPAWIAASLVG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ALMNSVYLQAVLKGWRNSVLFTLALLALDGVMWGLLRSEDSSLLLGTGVLLLALGGVMFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHH TRHLDWYSLSCQQRKSLPPVKDDELRLWK HHCCCCEECCHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2835585; 3531171; 7610040; 9278503; 2984198 [H]