Definition Prosthecochloris aestuarii DSM 271 chromosome, complete genome.
Accession NC_011059
Length 2,512,923

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The map label for this gene is yjjG [C]

Identifier: 194334823

GI number: 194334823

Start: 2222713

End: 2223399

Strand: Reverse

Name: yjjG [C]

Synonym: Paes_2026

Alternate gene names: 194334823

Gene position: 2223399-2222713 (Counterclockwise)

Preceding gene: 194334824

Following gene: 194334822

Centisome position: 88.48

GC content: 57.21

Gene sequence:

>687_bases
ATGACGATGACCCTCGCTTTTGATGTTTACGGGACACTGATCGATACGCACGGACTGGTGACAGAACTGCGGGAATTCGC
GGGAGACCGGGCCGGAGAGTTTTCGCGTGTCTGGAGGGAGAAACAGCTCGAATACTCCTTCAGACGAGGCCTCATGCACC
AGTATGAGACCTTCGCTGTCTGTACCCGCCAGGCGCTCGATTACACCAGTGCGTCTTGCAATGTGTTCCTCACCAGCCAA
CAAAAGTCCTTGCTGCTCGACAGGTATGCTGCATTGCCCGCGTTCAGTGACGCAGCATCGGCACTCGACGATCTCAGGGT
GGCAGGGTTCCGGTTGTTCGCCTTTTCCAACGGTACGGCAGATGCTGTTGAAACGCTCTTCCACAACGCCGGAATCAGGG
AGTATTTTCTCGATGTCCTGAGCGTGGACGACCTCTGTTCTTTCAAGCCCAACCCGGCGGTGTACAGCCATTTCCTGAGG
AAGTCCGGTGCAACGGCTGGCAGCGCCTGGCTGATTTCAAGTAATCCGTTTGACGTGATCGGGGCGATCTCGGCAGGCAT
GCGGGCTGCGTGGGTCAAGCGTTCACCCGATGCCCTGTTCGATCCGTGGGGGATAGAACCGACACTGACCGTTGCAGGTC
TCGAAGAGCTGTGTGGGTGTCTGCAAGCCTCTCTTTCCGGTGAGTGA

Upstream 100 bases:

>100_bases
GTATCCGGGTGATTTTGGCTGTCTCTGGCTTCGGGTTTTGACACTATTGCTGTACCTTAATGAGTACTATCAATAGCAAT
ATAACCCGGGACAACAGCCT

Downstream 100 bases:

>100_bases
ACCGGAGCGGGGCTCTTTGTGGCCGCATTGTCAGCACAGGCGGGAGGAATCGTCAACAGGAAAAAGTCTTTTCTGATATG
AACCCTGAAAAAGTCGACAG

Product: haloacid dehalogenase I

Products: NA

Alternate protein names: 2-haloalkanoic acid dehalogenase II; DEHCII; Halocarboxylic acid halidohydrolase II; L-2-haloacid dehalogenase II [H]

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MTMTLAFDVYGTLIDTHGLVTELREFAGDRAGEFSRVWREKQLEYSFRRGLMHQYETFAVCTRQALDYTSASCNVFLTSQ
QKSLLLDRYAALPAFSDAASALDDLRVAGFRLFAFSNGTADAVETLFHNAGIREYFLDVLSVDDLCSFKPNPAVYSHFLR
KSGATAGSAWLISSNPFDVIGAISAGMRAAWVKRSPDALFDPWGIEPTLTVAGLEELCGCLQASLSGE

Sequences:

>Translated_228_residues
MTMTLAFDVYGTLIDTHGLVTELREFAGDRAGEFSRVWREKQLEYSFRRGLMHQYETFAVCTRQALDYTSASCNVFLTSQ
QKSLLLDRYAALPAFSDAASALDDLRVAGFRLFAFSNGTADAVETLFHNAGIREYFLDVLSVDDLCSFKPNPAVYSHFLR
KSGATAGSAWLISSNPFDVIGAISAGMRAAWVKRSPDALFDPWGIEPTLTVAGLEELCGCLQASLSGE
>Mature_227_residues
TMTLAFDVYGTLIDTHGLVTELREFAGDRAGEFSRVWREKQLEYSFRRGLMHQYETFAVCTRQALDYTSASCNVFLTSQQ
KSLLLDRYAALPAFSDAASALDDLRVAGFRLFAFSNGTADAVETLFHNAGIREYFLDVLSVDDLCSFKPNPAVYSHFLRK
SGATAGSAWLISSNPFDVIGAISAGMRAAWVKRSPDALFDPWGIEPTLTVAGLEELCGCLQASLSGE

Specific function: Catalyzes the hydrolytic dehalogenation of small (S)-2- haloalkanoic acids to yield the corresponding (R)-2- hydroxyalkanoic acids. Acts on acids of short chain lengths, C(2) to C(4), with inversion of configuration at C-2 [H]

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. S-2- haloalkanoic acid dehalogenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006388
- InterPro:   IPR006328
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =3.8.1.2 [H]

Molecular weight: Translated: 25054; Mature: 24923

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMTLAFDVYGTLIDTHGLVTELREFAGDRAGEFSRVWREKQLEYSFRRGLMHQYETFAV
CEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CTRQALDYTSASCNVFLTSQQKSLLLDRYAALPAFSDAASALDDLRVAGFRLFAFSNGTA
HHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEECCCCH
DAVETLFHNAGIREYFLDVLSVDDLCSFKPNPAVYSHFLRKSGATAGSAWLISSNPFDVI
HHHHHHHHCCCHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHH
GAISAGMRAAWVKRSPDALFDPWGIEPTLTVAGLEELCGCLQASLSGE
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TMTLAFDVYGTLIDTHGLVTELREFAGDRAGEFSRVWREKQLEYSFRRGLMHQYETFAV
EEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CTRQALDYTSASCNVFLTSQQKSLLLDRYAALPAFSDAASALDDLRVAGFRLFAFSNGTA
HHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEECCCCH
DAVETLFHNAGIREYFLDVLSVDDLCSFKPNPAVYSHFLRKSGATAGSAWLISSNPFDVI
HHHHHHHHCCCHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHHH
GAISAGMRAAWVKRSPDALFDPWGIEPTLTVAGLEELCGCLQASLSGE
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1995594 [H]