| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is 194334808
Identifier: 194334808
GI number: 194334808
Start: 2208170
End: 2208727
Strand: Reverse
Name: 194334808
Synonym: Paes_2011
Alternate gene names: NA
Gene position: 2208727-2208170 (Counterclockwise)
Preceding gene: 194334809
Following gene: 194334807
Centisome position: 87.89
GC content: 51.61
Gene sequence:
>558_bases ATGCCGGGTAAGAAAATTATATCGCGACTCGGTCGCTCGATGAGTCTTCGCAGTTTTCAGGCAGGTCTGCTGATTTATGA TGGTACCCTGATCTTCTGTGATCGTTTTCTGCATACAAGGCCTTCTGTCTGCAGCCACATGACCCGTCATGCCTTCAGTG CTGTGTGCTCTCTTTCCGAGAGCGTTTTGATGTCAGGCAGTGACCGCCGCAGCAGACAACAGCTTGTTCACGTGGCTTCT GAACGGTTTCAGTCCCTCCAGAACCATTACGAGGCGTTTCTTGAAGAGAAGCAGTTTCCTCAATGGGGGGGCGATGAACA CGAGGCTCTCGTCGTCTGTAAACGCTTTTACGGCGTTGCCGACCGGATTGACCGGTCTGATTTTTTTGCATTTTCGGAGC TGTCGGCAGCTACATTTGCCAATACCGAGATCTGCCTTATTCGAAAAGCGGTATGGCTGCTTACGCAGCAATCCTCTGTA GATCCCTCTCCCGAGAGACAGAGCATACAGGGCGCTCAAAGAAAACCCGCTACTCGTTTCGATGCCATGCTGTGCTGA
Upstream 100 bases:
>100_bases GCTGGAAATCAGATGATACTGCTGTAATTTCATTTCTGTTCTGTAACTTGCGAGTCAAGCCGCCCTCTCCCTCCGTTTTG TAACCGAAGCGCAAAAAGCT
Downstream 100 bases:
>100_bases ATACGGGTGTTATTTTGTTACCTTGGAAGTGATGAAGAGGTTTGTTGATATTGTTTGATAAGGAGAAGAGATGATGAAGA GTCCGCTCCTGACGGGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MPGKKIISRLGRSMSLRSFQAGLLIYDGTLIFCDRFLHTRPSVCSHMTRHAFSAVCSLSESVLMSGSDRRSRQQLVHVAS ERFQSLQNHYEAFLEEKQFPQWGGDEHEALVVCKRFYGVADRIDRSDFFAFSELSAATFANTEICLIRKAVWLLTQQSSV DPSPERQSIQGAQRKPATRFDAMLC
Sequences:
>Translated_185_residues MPGKKIISRLGRSMSLRSFQAGLLIYDGTLIFCDRFLHTRPSVCSHMTRHAFSAVCSLSESVLMSGSDRRSRQQLVHVAS ERFQSLQNHYEAFLEEKQFPQWGGDEHEALVVCKRFYGVADRIDRSDFFAFSELSAATFANTEICLIRKAVWLLTQQSSV DPSPERQSIQGAQRKPATRFDAMLC >Mature_184_residues PGKKIISRLGRSMSLRSFQAGLLIYDGTLIFCDRFLHTRPSVCSHMTRHAFSAVCSLSESVLMSGSDRRSRQQLVHVASE RFQSLQNHYEAFLEEKQFPQWGGDEHEALVVCKRFYGVADRIDRSDFFAFSELSAATFANTEICLIRKAVWLLTQQSSVD PSPERQSIQGAQRKPATRFDAMLC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21014; Mature: 20883
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGKKIISRLGRSMSLRSFQAGLLIYDGTLIFCDRFLHTRPSVCSHMTRHAFSAVCSLSE CCHHHHHHHHCCCHHHHHHHCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH SVLMSGSDRRSRQQLVHVASERFQSLQNHYEAFLEEKQFPQWGGDEHEALVVCKRFYGVA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH DRIDRSDFFAFSELSAATFANTEICLIRKAVWLLTQQSSVDPSPERQSIQGAQRKPATRF HHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHCCCCHHH DAMLC HHHCC >Mature Secondary Structure PGKKIISRLGRSMSLRSFQAGLLIYDGTLIFCDRFLHTRPSVCSHMTRHAFSAVCSLSE CHHHHHHHHCCCHHHHHHHCCEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH SVLMSGSDRRSRQQLVHVASERFQSLQNHYEAFLEEKQFPQWGGDEHEALVVCKRFYGVA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH DRIDRSDFFAFSELSAATFANTEICLIRKAVWLLTQQSSVDPSPERQSIQGAQRKPATRF HHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHCCCCHHH DAMLC HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA