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The map label for this gene is ydiK [C]

Identifier: 194334809

GI number: 194334809

Start: 2208851

End: 2209942

Strand: Reverse

Name: ydiK [C]

Synonym: Paes_2012

Alternate gene names: 194334809

Gene position: 2209942-2208851 (Counterclockwise)

Preceding gene: 194334810

Following gene: 194334808

Centisome position: 87.94

GC content: 48.26

Gene sequence:

>1092_bases
ATGAAGAGGGCTGAACTTAATAATCTTGTTCTGCTGGTCTTTGTTCTGCTTATTTCGGCAATCTTTTTTTCCATGATCTA
TGATTTTCTCATGGTTATTCTGATTGCTGCAATCTTTTCAAGTCTTGCGTTGCCTGTCAACAGGTTTTTTGAGCGTCTGT
TCAAGGGGAAAAAGAGCTTGAGTTCGGCTTTAGCCCTTGTCTCTATTTCCCTGATCGGCATTTTTCCGCTCTTTGCCCTG
ATGGGAATCGTTGCAGCCCAGGCAGTCCGCATCAGTCGATCCGCAGGTCCATGGATCGAAAAACGTCTGGAGGAGCCGAC
GGCCTTTCATGATTTGTTTCTTACGCTGCCGTTTTATGAAACGATCAACGCCTACAGCGATCTCATTCTTCAGAGACTGG
GTGAAATGGTCAGTAAAACGGGAACCTTTCTTTTCGAAAACATCTCGTCGTTCACACTGTCGACCGTGCATACGCTCTTT
CTTTTTTTTGTTTTCCTCTATACCATGTTTTTTTTCCTTCGTGACGGCCGCGATATGCTGCAGCAGGCGCTCTACTACAT
GCCGCTGAACCAAAGCGATCAGTCGCGCATGCTCGACAAGTTTACCTCTGTGACCCGAGCCACTATTCGCGGTACGTTCG
TTATCGGGATTATCCAGGGAACGCTGGCAGGCCTGGCTTTTCAGGTTGCCGGTATTGAAAGCGCCGTTTTCTGGGGTGCG
ATCATGACTGTCCTGTCGGTCATACCCGTTGTCGGTTCCGGTCTTGTCTGGGTTCCTGCTGTTCTATATCTCTATGCGAC
AGGGGAGAATGTTGCTGCCACCGGCCTTTTGATTTTCTGCGGCATTCTTGTCAGCAGCATCGATAATATACTTCGTCCGG
TTCTTGTTGGTCGTGATACCCGGATGCACGAATTGCTGATTTTTTTCGGGACTATCGGCGGTATCGGTTTGTTTGGCATA
GCAGGTTTTATCGTCGGTCCGATCATCGCCGCGTTGTTTATTACCGTCTGGGAGATTTATGGCGAAACTTTCAAGGAGTA
TCTCAACGACGCCAAACAGGCGGGAGATTCTGCTGATGAAGAGTCGTTATAG

Upstream 100 bases:

>100_bases
TCTCCGGGCTGAAACTGCCGCAGTATTTGCTGTTGCCATGGCTCGCGCCGATATGCTTTTGAATAACGATGAATAATTAT
CAAGAAGAAAGGAGATCCTG

Downstream 100 bases:

>100_bases
CCTTTTTTTTTGGGGAGAAGCACGCTGGAAATCAGATGATACTGCTGTAATTTCATTTCTGTTCTGTAACTTGCGAGTCA
AGCCGCCCTCTCCCTCCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MKRAELNNLVLLVFVLLISAIFFSMIYDFLMVILIAAIFSSLALPVNRFFERLFKGKKSLSSALALVSISLIGIFPLFAL
MGIVAAQAVRISRSAGPWIEKRLEEPTAFHDLFLTLPFYETINAYSDLILQRLGEMVSKTGTFLFENISSFTLSTVHTLF
LFFVFLYTMFFFLRDGRDMLQQALYYMPLNQSDQSRMLDKFTSVTRATIRGTFVIGIIQGTLAGLAFQVAGIESAVFWGA
IMTVLSVIPVVGSGLVWVPAVLYLYATGENVAATGLLIFCGILVSSIDNILRPVLVGRDTRMHELLIFFGTIGGIGLFGI
AGFIVGPIIAALFITVWEIYGETFKEYLNDAKQAGDSADEESL

Sequences:

>Translated_363_residues
MKRAELNNLVLLVFVLLISAIFFSMIYDFLMVILIAAIFSSLALPVNRFFERLFKGKKSLSSALALVSISLIGIFPLFAL
MGIVAAQAVRISRSAGPWIEKRLEEPTAFHDLFLTLPFYETINAYSDLILQRLGEMVSKTGTFLFENISSFTLSTVHTLF
LFFVFLYTMFFFLRDGRDMLQQALYYMPLNQSDQSRMLDKFTSVTRATIRGTFVIGIIQGTLAGLAFQVAGIESAVFWGA
IMTVLSVIPVVGSGLVWVPAVLYLYATGENVAATGLLIFCGILVSSIDNILRPVLVGRDTRMHELLIFFGTIGGIGLFGI
AGFIVGPIIAALFITVWEIYGETFKEYLNDAKQAGDSADEESL
>Mature_363_residues
MKRAELNNLVLLVFVLLISAIFFSMIYDFLMVILIAAIFSSLALPVNRFFERLFKGKKSLSSALALVSISLIGIFPLFAL
MGIVAAQAVRISRSAGPWIEKRLEEPTAFHDLFLTLPFYETINAYSDLILQRLGEMVSKTGTFLFENISSFTLSTVHTLF
LFFVFLYTMFFFLRDGRDMLQQALYYMPLNQSDQSRMLDKFTSVTRATIRGTFVIGIIQGTLAGLAFQVAGIESAVFWGA
IMTVLSVIPVVGSGLVWVPAVLYLYATGENVAATGLLIFCGILVSSIDNILRPVLVGRDTRMHELLIFFGTIGGIGLFGI
AGFIVGPIIAALFITVWEIYGETFKEYLNDAKQAGDSADEESL

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=148, Percent_Identity=31.0810810810811, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40147; Mature: 40147

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCC
>Mature Secondary Structure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CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]