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The map label for this gene is yefC [C]

Identifier: 194334453

GI number: 194334453

Start: 1793413

End: 1793931

Strand: Reverse

Name: yefC [C]

Synonym: Paes_1648

Alternate gene names: 194334453

Gene position: 1793931-1793413 (Counterclockwise)

Preceding gene: 194334472

Following gene: 194334450

Centisome position: 71.39

GC content: 53.56

Gene sequence:

>519_bases
ATGTGGAGTGCTATGAGTCAGATCAAGCTGAGGGTCAGTGCCTTATGTATTCGCGAAGGGCATGTGTTGTTTATTGAGCA
TAAGAGCTTTGCTCCGGATGATCCCGCACTCCCTCCGACCTACTGGATTCTTCCGGGCGGTGTCGTCGAAAAGGGCGAAA
CGCTTCATGATGCTCTTCGGCGTGAGATGATGGAGGAGACCGGGCTGCGATGCCGGATTGGGGGAATGGTGTTTGTCAAG
GAGCTGCTCTATCCGAACCCCGGATGTGAGGGGTCTGGTTCACGGCATCATTCGGTTTCAATCGGTTTTCGGTGCGAGGT
GACAGGCGGGAATCTTATGACCGGTAGCGATCCGGAGCTTTCCGAGGAGGAGCAGATGATTATCGAGTCGAAGTGGTTGC
CGCTTGATCGACTCCACGAGTACCAACTCTATCCTCCGTTTCTGAAGGATCTGATAGCGGACGACCTTTCCGATGACTCA
GGAGAGGTCGTCCCGCAATTCTACGATTCTCTGTTATAG

Upstream 100 bases:

>100_bases
TGTTTGCTGCTTTCTGTGAAAGGCGACCAACTGGTGAACGGGGCTTGTTATTGTGAGCCGGAGCCGCGTCGTGAGCGATG
GCCCGGCAATAATTATTGAA

Downstream 100 bases:

>100_bases
GTCTACGATGACGCCAAGGGTACTGTAGCTTTCATCGTTGTAGAAATACATGCCGTGACGGCTCATGCCGTTGAAGTAGT
TGTATGCTATTCTGACATTT

Product: NUDIX hydrolase

Products: GDP; mannose [C]

Alternate protein names: NUDIX/MutT Family Protein; NUDIX Hydrolase Family Protein; MutT-Like Protein; NTP Pyrophosphohydrolase Including Oxidative Damage Repair; Nudix Hydrolase; Nudix/MutT Family Protein; Mutt/Nudix Family Protein

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MWSAMSQIKLRVSALCIREGHVLFIEHKSFAPDDPALPPTYWILPGGVVEKGETLHDALRREMMEETGLRCRIGGMVFVK
ELLYPNPGCEGSGSRHHSVSIGFRCEVTGGNLMTGSDPELSEEEQMIIESKWLPLDRLHEYQLYPPFLKDLIADDLSDDS
GEVVPQFYDSLL

Sequences:

>Translated_172_residues
MWSAMSQIKLRVSALCIREGHVLFIEHKSFAPDDPALPPTYWILPGGVVEKGETLHDALRREMMEETGLRCRIGGMVFVK
ELLYPNPGCEGSGSRHHSVSIGFRCEVTGGNLMTGSDPELSEEEQMIIESKWLPLDRLHEYQLYPPFLKDLIADDLSDDS
GEVVPQFYDSLL
>Mature_172_residues
MWSAMSQIKLRVSALCIREGHVLFIEHKSFAPDDPALPPTYWILPGGVVEKGETLHDALRREMMEETGLRCRIGGMVFVK
ELLYPNPGCEGSGSRHHSVSIGFRCEVTGGNLMTGSDPELSEEEQMIIESKWLPLDRLHEYQLYPPFLKDLIADDLSDDS
GEVVPQFYDSLL

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19364; Mature: 19364

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSAMSQIKLRVSALCIREGHVLFIEHKSFAPDDPALPPTYWILPGGVVEKGETLHDALR
CCCCHHHHHHHHHHEEEECCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHH
REMMEETGLRCRIGGMVFVKELLYPNPGCEGSGSRHHSVSIGFRCEVTGGNLMTGSDPEL
HHHHHHCCCEEEECHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCEEECCCCCCC
SEEEQMIIESKWLPLDRLHEYQLYPPFLKDLIADDLSDDSGEVVPQFYDSLL
CCHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MWSAMSQIKLRVSALCIREGHVLFIEHKSFAPDDPALPPTYWILPGGVVEKGETLHDALR
CCCCHHHHHHHHHHEEEECCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHH
REMMEETGLRCRIGGMVFVKELLYPNPGCEGSGSRHHSVSIGFRCEVTGGNLMTGSDPEL
HHHHHHCCCEEEECHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCEEECCCCCCC
SEEEQMIIESKWLPLDRLHEYQLYPPFLKDLIADDLSDDSGEVVPQFYDSLL
CCHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GDP-mannose; H2O [C]

Specific reaction: GDP-mannose + H2O = GDP + mannose [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA