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The map label for this gene is blc [H]

Identifier: 194334472

GI number: 194334472

Start: 1815389

End: 1815913

Strand: Reverse

Name: blc [H]

Synonym: Paes_1667

Alternate gene names: 194334472

Gene position: 1815913-1815389 (Counterclockwise)

Preceding gene: 194334473

Following gene: 194334453

Centisome position: 72.26

GC content: 51.05

Gene sequence:

>525_bases
ATGTTAAAACGGTTTTTGTTTTTACTTCCTGTTCTGCTGATGGGCTGTATCAAGGTCCCTGAGGGTGTGCGCGTTGTCGA
TGGCTTTGAGCTTGAGCGTTATCTCGGATCATGGTACGAGATTGCCCGTATCGAGAACTCTTTCGAGAAGGGTTTCACGA
GTGTTGTTGCTACCTATTCCCGTGATGATGATGGATCTGTCAAGGTTCTCAACAAGGGATATGACATGGAGGACGGGGAG
TGGAAGGAGACCAGAGGAAAAGCTAAGTTTGTTGGCGATCCGTCTCAAGGCGAACTCAAGGTGTCGTTTTTCGGCCCTTT
TTATTCGAGCTACAACATTGTCGATCTTGATCGGGAGAACTATTCCTGGGCGATAGTCTGCGGCTATAAAAAGTCGCTGT
TCTGGATTCTTGGACGGGAGCCCGAGATGGATAGTGCGCTCTACGAGCAGCTGGTGCAGCGGGCGGCCGACCTGGGATTT
GATACGACGGCTCTTGTGCGTCAGGAGCCGCTGCTTTCCGAGTGA

Upstream 100 bases:

>100_bases
CATGTGGAGCACCGGGTGCTGGTGAACGGGCGTAAAACGATTGTTTTTGAATGACCGCTCTTTTTTTCTGTTAACCTCTT
TTTACAAAGGAGATAGTTTG

Downstream 100 bases:

>100_bases
TCCTGTCGGTCCGGTTCCCTCTGGAGGGGGATGGTCAGAGAATATCAGGTATGACCGTTTCGTGCTGCAGTTTCCACATT
GATGAGTAGATTCCTTTTTG

Product: Lipocalin family protein

Products: NA

Alternate protein names: Protein vlp [H]

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MLKRFLFLLPVLLMGCIKVPEGVRVVDGFELERYLGSWYEIARIENSFEKGFTSVVATYSRDDDGSVKVLNKGYDMEDGE
WKETRGKAKFVGDPSQGELKVSFFGPFYSSYNIVDLDRENYSWAIVCGYKKSLFWILGREPEMDSALYEQLVQRAADLGF
DTTALVRQEPLLSE

Sequences:

>Translated_174_residues
MLKRFLFLLPVLLMGCIKVPEGVRVVDGFELERYLGSWYEIARIENSFEKGFTSVVATYSRDDDGSVKVLNKGYDMEDGE
WKETRGKAKFVGDPSQGELKVSFFGPFYSSYNIVDLDRENYSWAIVCGYKKSLFWILGREPEMDSALYEQLVQRAADLGF
DTTALVRQEPLLSE
>Mature_174_residues
MLKRFLFLLPVLLMGCIKVPEGVRVVDGFELERYLGSWYEIARIENSFEKGFTSVVATYSRDDDGSVKVLNKGYDMEDGE
WKETRGKAKFVGDPSQGELKVSFFGPFYSSYNIVDLDRENYSWAIVCGYKKSLFWILGREPEMDSALYEQLVQRAADLGF
DTTALVRQEPLLSE

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Homo sapiens, GI4502163, Length=134, Percent_Identity=35.0746268656716, Blast_Score=72, Evalue=2e-13,
Organism=Escherichia coli, GI1790592, Length=162, Percent_Identity=45.679012345679, Blast_Score=154, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 19930; Mature: 19930

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRFLFLLPVLLMGCIKVPEGVRVVDGFELERYLGSWYEIARIENSFEKGFTSVVATYS
CHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RDDDGSVKVLNKGYDMEDGEWKETRGKAKFVGDPSQGELKVSFFGPFYSSYNIVDLDREN
CCCCCCEEEEECCCCCCCCCCHHCCCCEEECCCCCCCCEEEEEECCCCCCCCEEEECCCC
YSWAIVCGYKKSLFWILGREPEMDSALYEQLVQRAADLGFDTTALVRQEPLLSE
CCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MLKRFLFLLPVLLMGCIKVPEGVRVVDGFELERYLGSWYEIARIENSFEKGFTSVVATYS
CHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RDDDGSVKVLNKGYDMEDGEWKETRGKAKFVGDPSQGELKVSFFGPFYSSYNIVDLDREN
CCCCCCEEEEECCCCCCCCCCHHCCCCEEECCCCCCCCEEEEEECCCCCCCCEEEECCCC
YSWAIVCGYKKSLFWILGREPEMDSALYEQLVQRAADLGFDTTALVRQEPLLSE
CCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8514410; 10952301 [H]