Definition Chloroherpeton thalassium ATCC 35110 chromosome, complete genome.
Accession NC_011026
Length 3,293,456

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The map label for this gene is 193214439

Identifier: 193214439

GI number: 193214439

Start: 847363

End: 848133

Strand: Direct

Name: 193214439

Synonym: Ctha_0722

Alternate gene names: NA

Gene position: 847363-848133 (Clockwise)

Preceding gene: 193214438

Following gene: 193214447

Centisome position: 25.73

GC content: 50.45

Gene sequence:

>771_bases
ATGAGCGCGAAAAATCAGGTTTTTGAGAAATTGTTGGCGGCCAAAGCGCGAAAAGGCGCAGGGTTTTTGCTTTTAATCGA
CCCCGATAAATATGATGCGTCGGGGTTGGAGCAGGTCGTTAAAAACGCAACAGCTTTTGGCGCGGATGGCTTTTTGATTG
GCGGCAGCCTACTTTTCTCAAACCGATTTGATGCGTATGTTCAGCAAATCAAATCTGCGACAGATTTACCCGTCATTCTT
TTTCCCGGCCATTCGGTTCAAATTTCGCCCTCAGCAGACGCCATTTTATTTCTTTCGCTTTTGAGCGGACGAAATCCTGA
ATTTCTCATCGGCCATCATGTAACGGCTGCGCCGAGCATCAAGGCATTCGGACTTGAATCCATGCCGACGGCCTACTTGC
TCGTGGAATCTGGCCGAAAAACTGCCGTTGAATTTATGAGCAACACCGAACCAATTCCACGCCACAAACCTGAGCTTGCT
GCGGTTCATGCGCTCGCAGCCGAATATTTAGGCATGAAAATGATTTATCTCGAAGCTGGCAGCGGCGCGGACGAATCCGT
GCCGGAGGAAATGGTTGAGCTGGTTTGTCAAACGGTCAGTTTGCCCGTGATTGTCGGCGGCGGTATCCGTTCAGCGCAAG
CGGTGCGAAGCAAAGTAGATGCGGGCGCAAGCTTCGTGGTCGTTGGCAACGCATTTGAAACACGAAACGACGCGAATTAT
CTGAAAACCATGATTGACGCCGCGCACCCCAATTTGCCCAAAGCGATTTGA

Upstream 100 bases:

>100_bases
TTTTTGCGGATGACGAAAAAGCGACGGCGTGCTACGAGGCAATGAGAAAACGCTACCCAACCTCGCTGACGCCAAAGTCC
TTCAAAATGAAGTGACCCGA

Downstream 100 bases:

>100_bases
GCCAGTCTTCAAAATGCTATAAAATCGATTCTAATTTTTCCGAAACGGTTTTCGAAAAGCTGACTGGCACGAACACCTCT
TCCGAGTACAAATAATTTTC

Product: geranylgeranylglyceryl phosphate synthase-like protein

Products: NA

Alternate protein names: GGGP synthase; GGGPS; (S)-3-O-geranylgeranylglyceryl phosphate synthase; Phosphoglycerol geranylgeranyltransferase [H]

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MSAKNQVFEKLLAAKARKGAGFLLLIDPDKYDASGLEQVVKNATAFGADGFLIGGSLLFSNRFDAYVQQIKSATDLPVIL
FPGHSVQISPSADAILFLSLLSGRNPEFLIGHHVTAAPSIKAFGLESMPTAYLLVESGRKTAVEFMSNTEPIPRHKPELA
AVHALAAEYLGMKMIYLEAGSGADESVPEEMVELVCQTVSLPVIVGGGIRSAQAVRSKVDAGASFVVVGNAFETRNDANY
LKTMIDAAHPNLPKAI

Sequences:

>Translated_256_residues
MSAKNQVFEKLLAAKARKGAGFLLLIDPDKYDASGLEQVVKNATAFGADGFLIGGSLLFSNRFDAYVQQIKSATDLPVIL
FPGHSVQISPSADAILFLSLLSGRNPEFLIGHHVTAAPSIKAFGLESMPTAYLLVESGRKTAVEFMSNTEPIPRHKPELA
AVHALAAEYLGMKMIYLEAGSGADESVPEEMVELVCQTVSLPVIVGGGIRSAQAVRSKVDAGASFVVVGNAFETRNDANY
LKTMIDAAHPNLPKAI
>Mature_255_residues
SAKNQVFEKLLAAKARKGAGFLLLIDPDKYDASGLEQVVKNATAFGADGFLIGGSLLFSNRFDAYVQQIKSATDLPVILF
PGHSVQISPSADAILFLSLLSGRNPEFLIGHHVTAAPSIKAFGLESMPTAYLLVESGRKTAVEFMSNTEPIPRHKPELAA
VHALAAEYLGMKMIYLEAGSGADESVPEEMVELVCQTVSLPVIVGGGIRSAQAVRSKVDAGASFVVVGNAFETRNDANYL
KTMIDAAHPNLPKAI

Specific function: Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membr

COG id: COG1646

COG function: function code R; Predicted phosphate-binding enzymes, TIM-barrel fold

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GGGP synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008205
- InterPro:   IPR010946 [H]

Pfam domain/function: PF01884 PcrB [H]

EC number: =2.5.1.41 [H]

Molecular weight: Translated: 27216; Mature: 27084

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAKNQVFEKLLAAKARKGAGFLLLIDPDKYDASGLEQVVKNATAFGADGFLIGGSLLFS
CCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEECCCCEEC
NRFDAYVQQIKSATDLPVILFPGHSVQISPSADAILFLSLLSGRNPEFLIGHHVTAAPSI
CHHHHHHHHHHCCCCCCEEEECCCEEEECCCCCHHHHHHHHCCCCCCEEEECCEECCCCC
KAFGLESMPTAYLLVESGRKTAVEFMSNTEPIPRHKPELAAVHALAAEYLGMKMIYLEAG
CCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEECC
SGADESVPEEMVELVCQTVSLPVIVGGGIRSAQAVRSKVDAGASFVVVGNAFETRNDANY
CCCCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH
LKTMIDAAHPNLPKAI
HHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SAKNQVFEKLLAAKARKGAGFLLLIDPDKYDASGLEQVVKNATAFGADGFLIGGSLLFS
CHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEECCCCEEC
NRFDAYVQQIKSATDLPVILFPGHSVQISPSADAILFLSLLSGRNPEFLIGHHVTAAPSI
CHHHHHHHHHHCCCCCCEEEECCCEEEECCCCCHHHHHHHHCCCCCCEEEECCEECCCCC
KAFGLESMPTAYLLVESGRKTAVEFMSNTEPIPRHKPELAAVHALAAEYLGMKMIYLEAG
CCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEECC
SGADESVPEEMVELVCQTVSLPVIVGGGIRSAQAVRSKVDAGASFVVVGNAFETRNDANY
CCCCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH
LKTMIDAAHPNLPKAI
HHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA