| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is argS [H]
Identifier: 193214239
GI number: 193214239
Start: 616846
End: 618504
Strand: Direct
Name: argS [H]
Synonym: Ctha_0520
Alternate gene names: 193214239
Gene position: 616846-618504 (Clockwise)
Preceding gene: 193214238
Following gene: 193214240
Centisome position: 18.73
GC content: 51.84
Gene sequence:
>1659_bases ATGAGAGACATTTTAGTAGAAGCGCTTAGAATGGCGCTTTCGGAACTCAGTGTGGAAAACGCCGAAGCGCGCGAAATTCA AATCGAGAAGCCTGCGGACGAAAAGTTCGGCGACGCCTCGACCAATGTGGCCATGACGCTTGCGCGTGAATTGCGGAAAA ATCCGCGTCAAATTGCCGCCGACATCATCTCGAACCTTTCGCTCGGCGAATCGGTGGATAAAATTGATGTGGCCGGCGCG GGCTTTATCAATTTTTATTTTTCAAAAAAATATATCACGGGCGCGGTCAAAGAGATTTTGACAGAGGGCGAAGATTTCGG GCGTTCCGAAGTCGGCAAAGGCAAAACGGCGATTGTCGAATATGTGAGCGCTAATCCGACGGGGCCGCTGACGGTCGGGC GCGGGCGCGGCGGCGTGCTGGGCGACTGCATTGCCAACATGCTGGAAGCGCAAGGTTACGATGTGACGCGCGAATATTAT TTCAACAACGCCGGTCGGCAAATGCGCATCTTGGCCGGTTCGGTTCGCTTCCGCTATCTCGAGCTTTGCGGCGAGCAAGT GGATTTTCCCGAAGATCATTATCAAGGCGGCTATATCGGCGATATTGCGCAAAAAATTTATGACGAAAAAGGCACAAGCC TTGCGGGCGAGGAAGACCTTTCGTTTTTCAAAGAATTTGCCGAAGCGGAAATTTTTGAGAGCATCAAAAACACGCTCGGA CGCTTGGGCATTAAGCACGATTCGTTTTTCAACGAAAATACGCTTTACGAAAAAGGGGAAAACGGCAAAAGTCGCAACGA CGAGGTCGTGGAACGCCTTGCGGAAAAAGGCTACATCAAGCACGAGGACGGCGCAACTTGGTTTTTAACGACGAAATTCG GCCTTGAAAAAGACAAAGTGCTGGTGAAATCTACGGGCGAACCGAGCTATCGCCTGCCCGATATTGCCTATCACATCACG AAGTTCGAGCGCGATTTTTCCTTGATGGTCAATGTCTTTGGCGCCGACCACATCGATGAATATCCCGATGTGCTGCGAGC GTTGGAGGTGTTGGGATATGAGAAAGAGCGCGTGCAGGTCGCCATCAATCAGTTTGTGACGACGACCGTAAACGGCGAGG TCGTGAAAATGTCGACGCGCAAAGGCAACGCGGATTTGTTGGACGATTTAATTGACGATGTCGGCGCGGACGCCACGCGG TTTTTCTTCATCATTCGCAACAAAGAATCGCATCTGAATTTTGATGTCGATTTGGCCAAAAAGCAGTCGACGGACAACCC GGTCTTTTACTTGCAATACGCCCACGCCAGAATTTGCAGCCTGATTCGCGTTGCCGGCGAAGAAACGGACTTCGAGCCGA GCGCGTCGGAATATGATTTGCTTGACGCGCTTACTGCAAATGAGGAACTTCAGCTTGCGAAGATTTTGCTTGAGTACGGC ACGGCGCTTGAAGTTTGCGTGAACGCGCTTGAGCCGCAAAAGCTCATCGGCTACATGAACCGCGTGGCCGAAGCCTTCCA CAAGTTTTATCAGGAATGCCGCATCGTGAGCGAGGAAGAATCGGTGCGCAAGTCGCGCTTGTATTTGTGCCTTGCCACAC GCCAAGTGCTGCAAAACGGCTTCAAGGTGCTGGGCATTTCCGCGCCGGAGAAGATGTGA
Upstream 100 bases:
>100_bases TAATTTTTCCGATGCAGGAACGGATAAACGACCAAGATGAGAAACCGTAACTTGTCATGCTTCATTTTGTTCAGCATGAC AAATTTTAGAAAATCATAGC
Downstream 100 bases:
>100_bases GTTTTTGAAAAATCCTTTGGATATGCTGTGAAATTTTGAAAAAATAACCCTCAGAATGTGGCCTTCAGCAACAGAATCCT TCTGCTGAAGGCTTAACTTA
Product: arginyl-tRNA synthetase
Products: NA
Alternate protein names: Arginine--tRNA ligase; ArgRS [H]
Number of amino acids: Translated: 552; Mature: 552
Protein sequence:
>552_residues MRDILVEALRMALSELSVENAEAREIQIEKPADEKFGDASTNVAMTLARELRKNPRQIAADIISNLSLGESVDKIDVAGA GFINFYFSKKYITGAVKEILTEGEDFGRSEVGKGKTAIVEYVSANPTGPLTVGRGRGGVLGDCIANMLEAQGYDVTREYY FNNAGRQMRILAGSVRFRYLELCGEQVDFPEDHYQGGYIGDIAQKIYDEKGTSLAGEEDLSFFKEFAEAEIFESIKNTLG RLGIKHDSFFNENTLYEKGENGKSRNDEVVERLAEKGYIKHEDGATWFLTTKFGLEKDKVLVKSTGEPSYRLPDIAYHIT KFERDFSLMVNVFGADHIDEYPDVLRALEVLGYEKERVQVAINQFVTTTVNGEVVKMSTRKGNADLLDDLIDDVGADATR FFFIIRNKESHLNFDVDLAKKQSTDNPVFYLQYAHARICSLIRVAGEETDFEPSASEYDLLDALTANEELQLAKILLEYG TALEVCVNALEPQKLIGYMNRVAEAFHKFYQECRIVSEEESVRKSRLYLCLATRQVLQNGFKVLGISAPEKM
Sequences:
>Translated_552_residues MRDILVEALRMALSELSVENAEAREIQIEKPADEKFGDASTNVAMTLARELRKNPRQIAADIISNLSLGESVDKIDVAGA GFINFYFSKKYITGAVKEILTEGEDFGRSEVGKGKTAIVEYVSANPTGPLTVGRGRGGVLGDCIANMLEAQGYDVTREYY FNNAGRQMRILAGSVRFRYLELCGEQVDFPEDHYQGGYIGDIAQKIYDEKGTSLAGEEDLSFFKEFAEAEIFESIKNTLG RLGIKHDSFFNENTLYEKGENGKSRNDEVVERLAEKGYIKHEDGATWFLTTKFGLEKDKVLVKSTGEPSYRLPDIAYHIT KFERDFSLMVNVFGADHIDEYPDVLRALEVLGYEKERVQVAINQFVTTTVNGEVVKMSTRKGNADLLDDLIDDVGADATR FFFIIRNKESHLNFDVDLAKKQSTDNPVFYLQYAHARICSLIRVAGEETDFEPSASEYDLLDALTANEELQLAKILLEYG TALEVCVNALEPQKLIGYMNRVAEAFHKFYQECRIVSEEESVRKSRLYLCLATRQVLQNGFKVLGISAPEKM >Mature_552_residues MRDILVEALRMALSELSVENAEAREIQIEKPADEKFGDASTNVAMTLARELRKNPRQIAADIISNLSLGESVDKIDVAGA GFINFYFSKKYITGAVKEILTEGEDFGRSEVGKGKTAIVEYVSANPTGPLTVGRGRGGVLGDCIANMLEAQGYDVTREYY FNNAGRQMRILAGSVRFRYLELCGEQVDFPEDHYQGGYIGDIAQKIYDEKGTSLAGEEDLSFFKEFAEAEIFESIKNTLG RLGIKHDSFFNENTLYEKGENGKSRNDEVVERLAEKGYIKHEDGATWFLTTKFGLEKDKVLVKSTGEPSYRLPDIAYHIT KFERDFSLMVNVFGADHIDEYPDVLRALEVLGYEKERVQVAINQFVTTTVNGEVVKMSTRKGNADLLDDLIDDVGADATR FFFIIRNKESHLNFDVDLAKKQSTDNPVFYLQYAHARICSLIRVAGEETDFEPSASEYDLLDALTANEELQLAKILLEYG TALEVCVNALEPQKLIGYMNRVAEAFHKFYQECRIVSEEESVRKSRLYLCLATRQVLQNGFKVLGISAPEKM
Specific function: Unknown
COG id: COG0018
COG function: function code J; Arginyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI15149476, Length=576, Percent_Identity=24.8263888888889, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI197100773, Length=578, Percent_Identity=24.2214532871972, Blast_Score=102, Evalue=7e-22, Organism=Escherichia coli, GI1788184, Length=590, Percent_Identity=25.7627118644068, Blast_Score=127, Evalue=1e-30, Organism=Caenorhabditis elegans, GI71985061, Length=583, Percent_Identity=24.6998284734134, Blast_Score=111, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71985068, Length=547, Percent_Identity=23.7659963436929, Blast_Score=91, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6320548, Length=549, Percent_Identity=25.1366120218579, Blast_Score=139, Evalue=8e-34, Organism=Saccharomyces cerevisiae, GI6321883, Length=548, Percent_Identity=24.6350364963504, Blast_Score=114, Evalue=6e-26, Organism=Drosophila melanogaster, GI18859963, Length=579, Percent_Identity=25.5613126079447, Blast_Score=125, Evalue=6e-29, Organism=Drosophila melanogaster, GI28571570, Length=490, Percent_Identity=23.6734693877551, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: 789 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001278 - InterPro: IPR015945 - InterPro: IPR005148 - InterPro: IPR008909 - InterPro: IPR014729 - InterPro: IPR009080 [H]
Pfam domain/function: PF03485 Arg_tRNA_synt_N; PF05746 DALR_1; PF00750 tRNA-synt_1d [H]
EC number: =6.1.1.19 [H]
Molecular weight: Translated: 62011; Mature: 62011
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDILVEALRMALSELSVENAEAREIQIEKPADEKFGDASTNVAMTLARELRKNPRQIAA CHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHH DIISNLSLGESVDKIDVAGAGFINFYFSKKYITGAVKEILTEGEDFGRSEVGKGKTAIVE HHHHCCCCCCCCCCEECCCCCCEEHHHHHHHHHHHHHHHHHCCHHCCCHHCCCCCCCEEE YVSANPTGPLTVGRGRGGVLGDCIANMLEAQGYDVTREYYFNNAGRQMRILAGSVRFRYL EECCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEHHHHHHHH ELCGEQVDFPEDHYQGGYIGDIAQKIYDEKGTSLAGEEDLSFFKEFAEAEIFESIKNTLG HHCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RLGIKHDSFFNENTLYEKGENGKSRNDEVVERLAEKGYIKHEDGATWFLTTKFGLEKDKV HCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCEEEEEEECCCCCCCE LVKSTGEPSYRLPDIAYHITKFERDFSLMVNVFGADHIDEYPDVLRALEVLGYEKERVQV EEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHH AINQFVTTTVNGEVVKMSTRKGNADLLDDLIDDVGADATRFFFIIRNKESHLNFDVDLAK HHHHHHHEECCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEECC KQSTDNPVFYLQYAHARICSLIRVAGEETDFEPSASEYDLLDALTANEELQLAKILLEYG CCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHC TALEVCVNALEPQKLIGYMNRVAEAFHKFYQECRIVSEEESVRKSRLYLCLATRQVLQNG CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC FKVLGISAPEKM CEEEEECCCCCC >Mature Secondary Structure MRDILVEALRMALSELSVENAEAREIQIEKPADEKFGDASTNVAMTLARELRKNPRQIAA CHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHH DIISNLSLGESVDKIDVAGAGFINFYFSKKYITGAVKEILTEGEDFGRSEVGKGKTAIVE HHHHCCCCCCCCCCEECCCCCCEEHHHHHHHHHHHHHHHHHCCHHCCCHHCCCCCCCEEE YVSANPTGPLTVGRGRGGVLGDCIANMLEAQGYDVTREYYFNNAGRQMRILAGSVRFRYL EECCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEHHHHHHHH ELCGEQVDFPEDHYQGGYIGDIAQKIYDEKGTSLAGEEDLSFFKEFAEAEIFESIKNTLG HHCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RLGIKHDSFFNENTLYEKGENGKSRNDEVVERLAEKGYIKHEDGATWFLTTKFGLEKDKV HCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCEEEEEEECCCCCCCE LVKSTGEPSYRLPDIAYHITKFERDFSLMVNVFGADHIDEYPDVLRALEVLGYEKERVQV EEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHH AINQFVTTTVNGEVVKMSTRKGNADLLDDLIDDVGADATRFFFIIRNKESHLNFDVDLAK HHHHHHHEECCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEECC KQSTDNPVFYLQYAHARICSLIRVAGEETDFEPSASEYDLLDALTANEELQLAKILLEYG CCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHC TALEVCVNALEPQKLIGYMNRVAEAFHKFYQECRIVSEEESVRKSRLYLCLATRQVLQNG CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC FKVLGISAPEKM CEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA