| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214240
Identifier: 193214240
GI number: 193214240
Start: 618699
End: 620111
Strand: Direct
Name: 193214240
Synonym: Ctha_0521
Alternate gene names: NA
Gene position: 618699-620111 (Clockwise)
Preceding gene: 193214239
Following gene: 193214241
Centisome position: 18.79
GC content: 46.99
Gene sequence:
>1413_bases ATGCAAAACCCAATCGATGCTCATTTCTTATTTCGCTCCGACGGCGGCTTTATTCGAATGCCGGTTTGGGGACACATTCC ACTGATTCAACCACTTAAAAAAATTATTTCACACCCTGCATTTTTGCGATTGAAAGGCATTCGCCAGCTTTCTTTTGCGC ATCATGTTTTTCCCGGCGCCACACATACGCGCTTTGAGCACTCCATCGGCGTCTATCATTTGATGAAATTGATTTTGCAA CGAGTGGTCACCAATCCCTTAACCGCTTCGCATCAGACAGAGACTTTTTGTTTCGACGAAAACACCTGCCGATTGCTTTT GGCCGCAAGCCTTTTGCACGACATTGGCCACTATCCGCACGCCCACGCGTTAGAAAGTGCGGCGCTGAAGCTCAACGGCG CATTGGTTTTTGAGCATCACGAAAAATTGACAGAAGCTCGTCTCTACGAATCGCATCAAGGGTTTGGTTCGCTGGCTGGG ATTCTTAAGGAAGAGTGGAAAGTTGAGCCGGAGCAAGTCATCGCTTTGATTTCGGGCAAAACGGCTTCGCCATTTTCGAA ACTCATTAGCGGCACGCTCGATCCTGATAAAATGGATTACCTCATGCGCGACGCGCACCATTGCAATATCCCGTATGGAA ATATCGACATCGAGCGCTTGATCGAGTCGTTTGTGCCCGACGCCGAGCGCCGCAGATTTGCAATTACCGAAAAAGGCATT GCGCCGCTCGAAAGTCTCATGTTTGCCAAATACATGATGATGCGCAATGTATATTGGCATCACACCGTGCGTACGCTTTC GGCCATGCTTCGGCGTGCGGTGCAAGACATTTTGGGCGGCAAGCATCTTTCTGTGCAAGAATGCCAGCATATTTTTTATC ATAATGCCGATGAGCGCGTGCTCTACGATTTGCGCGAGCGAGTGGCCATTGCAAAGTGCAAATCTGCGGAATTGCTTGAT CGGCTCGTCGAGCGTCAGTCGTACAAGCGAGCCATGACAATTGGCTTGCAAGAAGCGGGTGCAATTGCCAACATGCCAAA TTTGCTCAGCCGCATCTACGCCATTAGTGAGGATGCTGAACTTTGCAAGCAAAAGGAAATTGAAATTTGTGAAATGATGA ACCATAAGTTCCAGCTAAAGCTGCATGGACATGAGATTCTCATCGATGCGCCATCGAACAAGCACATTTTCGATTATCAA GATTTCCGCGAACTGCATATTTTCCGCGGAGATACAAGTGGCAATAAAGGAGTTTTTCTACCTTTCGATAAATCAGGCGA ATCTGTTTTCGAATCGCGATTTATTTTAGAATTTGAAAAATACACAAAGAAGCTTCGGATTGTCTCGCGGCCTGAAATTG CTACGCATTTGCGTAATTTAAAGCGAGAAGTGCTTGAGATTTTGTATAGCTGA
Upstream 100 bases:
>100_bases AACTTATTTTGTTGTTTCGCTCCTGTTCGTTGCGTTTCCTTTTCCAATTAGAAGAAAATCTCAGCGGGCATATTTTTAAT TGCGGCAAAAAACTTTTTTC
Downstream 100 bases:
>100_bases TTTCGGGTATTAATTTCCCTATCATTAAACACTAAAAGAGTAGTTGATCTATGGAAAAGGAAAAAGAGGGTATCGGATTC GTAAAAGGCCTTGCAATTGG
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MQNPIDAHFLFRSDGGFIRMPVWGHIPLIQPLKKIISHPAFLRLKGIRQLSFAHHVFPGATHTRFEHSIGVYHLMKLILQ RVVTNPLTASHQTETFCFDENTCRLLLAASLLHDIGHYPHAHALESAALKLNGALVFEHHEKLTEARLYESHQGFGSLAG ILKEEWKVEPEQVIALISGKTASPFSKLISGTLDPDKMDYLMRDAHHCNIPYGNIDIERLIESFVPDAERRRFAITEKGI APLESLMFAKYMMMRNVYWHHTVRTLSAMLRRAVQDILGGKHLSVQECQHIFYHNADERVLYDLRERVAIAKCKSAELLD RLVERQSYKRAMTIGLQEAGAIANMPNLLSRIYAISEDAELCKQKEIEICEMMNHKFQLKLHGHEILIDAPSNKHIFDYQ DFRELHIFRGDTSGNKGVFLPFDKSGESVFESRFILEFEKYTKKLRIVSRPEIATHLRNLKREVLEILYS
Sequences:
>Translated_470_residues MQNPIDAHFLFRSDGGFIRMPVWGHIPLIQPLKKIISHPAFLRLKGIRQLSFAHHVFPGATHTRFEHSIGVYHLMKLILQ RVVTNPLTASHQTETFCFDENTCRLLLAASLLHDIGHYPHAHALESAALKLNGALVFEHHEKLTEARLYESHQGFGSLAG ILKEEWKVEPEQVIALISGKTASPFSKLISGTLDPDKMDYLMRDAHHCNIPYGNIDIERLIESFVPDAERRRFAITEKGI APLESLMFAKYMMMRNVYWHHTVRTLSAMLRRAVQDILGGKHLSVQECQHIFYHNADERVLYDLRERVAIAKCKSAELLD RLVERQSYKRAMTIGLQEAGAIANMPNLLSRIYAISEDAELCKQKEIEICEMMNHKFQLKLHGHEILIDAPSNKHIFDYQ DFRELHIFRGDTSGNKGVFLPFDKSGESVFESRFILEFEKYTKKLRIVSRPEIATHLRNLKREVLEILYS >Mature_470_residues MQNPIDAHFLFRSDGGFIRMPVWGHIPLIQPLKKIISHPAFLRLKGIRQLSFAHHVFPGATHTRFEHSIGVYHLMKLILQ RVVTNPLTASHQTETFCFDENTCRLLLAASLLHDIGHYPHAHALESAALKLNGALVFEHHEKLTEARLYESHQGFGSLAG ILKEEWKVEPEQVIALISGKTASPFSKLISGTLDPDKMDYLMRDAHHCNIPYGNIDIERLIESFVPDAERRRFAITEKGI APLESLMFAKYMMMRNVYWHHTVRTLSAMLRRAVQDILGGKHLSVQECQHIFYHNADERVLYDLRERVAIAKCKSAELLD RLVERQSYKRAMTIGLQEAGAIANMPNLLSRIYAISEDAELCKQKEIEICEMMNHKFQLKLHGHEILIDAPSNKHIFDYQ DFRELHIFRGDTSGNKGVFLPFDKSGESVFESRFILEFEKYTKKLRIVSRPEIATHLRNLKREVLEILYS
Specific function: Unknown
COG id: COG1078
COG function: function code R; HD superfamily phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
Organism=Homo sapiens, GI38016914, Length=283, Percent_Identity=26.5017667844523, Blast_Score=93, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17537827, Length=305, Percent_Identity=24.2622950819672, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17537829, Length=305, Percent_Identity=24.2622950819672, Blast_Score=82, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003607 - InterPro: IPR006675 - InterPro: IPR011991 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54148; Mature: 54148
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNPIDAHFLFRSDGGFIRMPVWGHIPLIQPLKKIISHPAFLRLKGIRQLSFAHHVFPGA CCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHCCCHHEEHHHHHHHHHHHHHCCCC THTRFEHSIGVYHLMKLILQRVVTNPLTASHQTETFCFDENTCRLLLAASLLHDIGHYPH CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCC AHALESAALKLNGALVFEHHEKLTEARLYESHQGFGSLAGILKEEWKVEPEQVIALISGK HHHHHHHHHEECCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCC TASPFSKLISGTLDPDKMDYLMRDAHHCNIPYGNIDIERLIESFVPDAERRRFAITEKGI CCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHCEEEECCCCC APLESLMFAKYMMMRNVYWHHTVRTLSAMLRRAVQDILGGKHLSVQECQHIFYHNADERV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHH LYDLRERVAIAKCKSAELLDRLVERQSYKRAMTIGLQEAGAIANMPNLLSRIYAISEDAE HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHH LCKQKEIEICEMMNHKFQLKLHGHEILIDAPSNKHIFDYQDFRELHIFRGDTSGNKGVFL HHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCCCCHHHHHHEEEEECCCCCCCCEEE PFDKSGESVFESRFILEFEKYTKKLRIVSRPEIATHLRNLKREVLEILYS ECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQNPIDAHFLFRSDGGFIRMPVWGHIPLIQPLKKIISHPAFLRLKGIRQLSFAHHVFPGA CCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHCCCHHEEHHHHHHHHHHHHHCCCC THTRFEHSIGVYHLMKLILQRVVTNPLTASHQTETFCFDENTCRLLLAASLLHDIGHYPH CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCC AHALESAALKLNGALVFEHHEKLTEARLYESHQGFGSLAGILKEEWKVEPEQVIALISGK HHHHHHHHHEECCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCC TASPFSKLISGTLDPDKMDYLMRDAHHCNIPYGNIDIERLIESFVPDAERRRFAITEKGI CCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHCEEEECCCCC APLESLMFAKYMMMRNVYWHHTVRTLSAMLRRAVQDILGGKHLSVQECQHIFYHNADERV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHH LYDLRERVAIAKCKSAELLDRLVERQSYKRAMTIGLQEAGAIANMPNLLSRIYAISEDAE HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHH LCKQKEIEICEMMNHKFQLKLHGHEILIDAPSNKHIFDYQDFRELHIFRGDTSGNKGVFL HHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCCCCHHHHHHEEEEECCCCCCCCEEE PFDKSGESVFESRFILEFEKYTKKLRIVSRPEIATHLRNLKREVLEILYS ECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]