| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is ycjU [H]
Identifier: 193214238
GI number: 193214238
Start: 616031
End: 616711
Strand: Direct
Name: ycjU [H]
Synonym: Ctha_0519
Alternate gene names: 193214238
Gene position: 616031-616711 (Clockwise)
Preceding gene: 193214237
Following gene: 193214239
Centisome position: 18.7
GC content: 50.51
Gene sequence:
>681_bases ATGCAAGATCGGGTTGCGTTCATTTTCGATATGGACGGCGTGATTATCGACAACATGCAATACCATGTTGATACTTGGCT CGCACTGTTTCGCGACAAAGGCCACGAACTTTCGTTGGACGATTTTCTCGAGAAAACCGCTGGAAAAAAAGCCGAAGAAG TCGTGCGGATGTTTCTTGGCGAAAGCGTAACGGACGCGGATGTGCAAAAATATGCCGAGCAAAAGGACTTTTTGTATCGC TATTTATATCGACCGAAATTAGCGCCGCTTGCCGGATTCATGGCATTTGTGGAAGCCGCCAAATCGGCTGAGATTTTGAT GGGCGTTGGCACAGGCGGCAGCCCGGAAAATATCGAGTTCGTGCTGGGCGGCCTTAACTTGAAGCCATATTTCAAAACGA TCGTTGGCGCAGCTAATGTGAGTAAAGGAAAGCCCGACCCGGAAATTTATTTGAAAGCGGCAGATCAACTTGGCATCGCG CCGGAAAACTGCATCGTCTTTGAAGATGCGTTGCCGGGCCTCGAGGCTGCGCGCCGCGCTGGCATGAAATCGGTAGCGAT TACGACCTCGCACACGGAAGCGGAGTTCGCTGCGGCTGAAAGTGTTTTTTGCATCGCAGGTGATTTTACCAATTTGAAGC CTTTGGCGCTCATTGAAGAATCACGCCAAGCGGTGCTTTAG
Upstream 100 bases:
>100_bases TTATTTTCTCTTTCAAAAAAATGCCACCGGTCGTTTGCAAATTCAGCAAACGTTTGCGCTTTCGTTTGGCTACGCTTTTT CAAACATATAAAATCAAATT
Downstream 100 bases:
>100_bases CGATAATTTTAATCCGTGTCGTGCTTGGAGCGGGTAATTTTTCCGATGCAGGAACGGATAAACGACCAAGATGAGAAACC GTAACTTGTCATGCTTCATT
Product: beta-phosphoglucomutase family hydrolase
Products: NA
Alternate protein names: Beta-PGM [H]
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MQDRVAFIFDMDGVIIDNMQYHVDTWLALFRDKGHELSLDDFLEKTAGKKAEEVVRMFLGESVTDADVQKYAEQKDFLYR YLYRPKLAPLAGFMAFVEAAKSAEILMGVGTGGSPENIEFVLGGLNLKPYFKTIVGAANVSKGKPDPEIYLKAADQLGIA PENCIVFEDALPGLEAARRAGMKSVAITTSHTEAEFAAAESVFCIAGDFTNLKPLALIEESRQAVL
Sequences:
>Translated_226_residues MQDRVAFIFDMDGVIIDNMQYHVDTWLALFRDKGHELSLDDFLEKTAGKKAEEVVRMFLGESVTDADVQKYAEQKDFLYR YLYRPKLAPLAGFMAFVEAAKSAEILMGVGTGGSPENIEFVLGGLNLKPYFKTIVGAANVSKGKPDPEIYLKAADQLGIA PENCIVFEDALPGLEAARRAGMKSVAITTSHTEAEFAAAESVFCIAGDFTNLKPLALIEESRQAVL >Mature_226_residues MQDRVAFIFDMDGVIIDNMQYHVDTWLALFRDKGHELSLDDFLEKTAGKKAEEVVRMFLGESVTDADVQKYAEQKDFLYR YLYRPKLAPLAGFMAFVEAAKSAEILMGVGTGGSPENIEFVLGGLNLKPYFKTIVGAANVSKGKPDPEIYLKAADQLGIA PENCIVFEDALPGLEAARRAGMKSVAITTSHTEAEFAAAESVFCIAGDFTNLKPLALIEESRQAVL
Specific function: Reversible transformation of glucose 6-phosphate and beta-glucose 1-phosphate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1787576, Length=197, Percent_Identity=31.4720812182741, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1789046, Length=190, Percent_Identity=31.5789473684211, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1788021, Length=190, Percent_Identity=24.7368421052632, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1790151, Length=187, Percent_Identity=25.668449197861, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010976 - InterPro: IPR010972 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =5.4.2.6 [H]
Molecular weight: Translated: 24781; Mature: 24781
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDRVAFIFDMDGVIIDNMQYHVDTWLALFRDKGHELSLDDFLEKTAGKKAEEVVRMFLG CCCCEEEEEECCCEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHC ESVTDADVQKYAEQKDFLYRYLYRPKLAPLAGFMAFVEAAKSAEILMGVGTGGSPENIEF CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEE VLGGLNLKPYFKTIVGAANVSKGKPDPEIYLKAADQLGIAPENCIVFEDALPGLEAARRA EEECCCCCHHHHHHHHCCCCCCCCCCHHEEEEEHHHCCCCCCCEEEECCCCCCHHHHHHC GMKSVAITTSHTEAEFAAAESVFCIAGDFTNLKPLALIEESRQAVL CCCEEEEEECCCHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MQDRVAFIFDMDGVIIDNMQYHVDTWLALFRDKGHELSLDDFLEKTAGKKAEEVVRMFLG CCCCEEEEEECCCEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHC ESVTDADVQKYAEQKDFLYRYLYRPKLAPLAGFMAFVEAAKSAEILMGVGTGGSPENIEF CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEE VLGGLNLKPYFKTIVGAANVSKGKPDPEIYLKAADQLGIAPENCIVFEDALPGLEAARRA EEECCCCCHHHHHHHHCCCCCCCCCCHHEEEEEHHHCCCCCCCEEEECCCCCCHHHHHHC GMKSVAITTSHTEAEFAAAESVFCIAGDFTNLKPLALIEESRQAVL CCCEEEEEECCCHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]