Definition Chloroherpeton thalassium ATCC 35110 chromosome, complete genome.
Accession NC_011026
Length 3,293,456

Click here to switch to the map view.

The map label for this gene is 193214234

Identifier: 193214234

GI number: 193214234

Start: 612094

End: 612657

Strand: Direct

Name: 193214234

Synonym: Ctha_0515

Alternate gene names: NA

Gene position: 612094-612657 (Clockwise)

Preceding gene: 193214233

Following gene: 193214235

Centisome position: 18.59

GC content: 44.5

Gene sequence:

>564_bases
ATGATTTTTTCAGACGAACTTTCGCTTTCAATCTTTAAAATCTTCACCATGATTTCTAAAACACGGCTCTTTCTGCTTTT
CTTTTTCTTTCTCATGGCAACGCTTAGCGGATGCTATTCTTTTTCGGAAGGATCATTGCCAAGCCACATCAAAACAATCG
CCATTCCCGTTTTCGGCGATGAATCCAGCAGTGGCATCGGGCAGCTTCGCGAACAGCTCACCACCAAAATGGTCGATCAT
GTGCAATCTCAAAGCTCTTTGGTTATTGAGCAAGATAGACGCCTGGCAAATTCGGTAATGGAAGCGGTTATCAAATCGTA
TTCCGATGAGCCAAGCCAAGTCAGCAGCACCACAGAACGCGCCACACAAAACCGCATCAGCATTACCATTAGTGTTACTT
ACAAAGATTTGGTTACCAAAAAGACGCTTTTTACCCAATCTTTCACTGGCATTTCCGACTACGCAATCGGCGATTTTACC
GCACAACAAGAATCTATTGAGGAAGCCATCGATCAAGTTTCGGATGACATTTTAAATCGACTGCTGGCTGGCGCAGGCTG
GTAG

Upstream 100 bases:

>100_bases
ATGTTCATTCGCGCGCGGGCGCAACGCAGAAAATCGCCGGTGCTTTGCTGCCTGCGCAAAAAAACGCGCCGCCTCATCGT
GGAAACACGCTCAACGCAAC

Downstream 100 bases:

>100_bases
ATCGCGCAATCTTAAATTTTGTCAGGAAAAAGAATATCAACATTTGTAAGGCAGTCATGAACGTTTCGGATTTTGATTAC
ACGCTACCCGATGAACAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MIFSDELSLSIFKIFTMISKTRLFLLFFFFLMATLSGCYSFSEGSLPSHIKTIAIPVFGDESSSGIGQLREQLTTKMVDH
VQSQSSLVIEQDRRLANSVMEAVIKSYSDEPSQVSSTTERATQNRISITISVTYKDLVTKKTLFTQSFTGISDYAIGDFT
AQQESIEEAIDQVSDDILNRLLAGAGW

Sequences:

>Translated_187_residues
MIFSDELSLSIFKIFTMISKTRLFLLFFFFLMATLSGCYSFSEGSLPSHIKTIAIPVFGDESSSGIGQLREQLTTKMVDH
VQSQSSLVIEQDRRLANSVMEAVIKSYSDEPSQVSSTTERATQNRISITISVTYKDLVTKKTLFTQSFTGISDYAIGDFT
AQQESIEEAIDQVSDDILNRLLAGAGW
>Mature_187_residues
MIFSDELSLSIFKIFTMISKTRLFLLFFFFLMATLSGCYSFSEGSLPSHIKTIAIPVFGDESSSGIGQLREQLTTKMVDH
VQSQSSLVIEQDRRLANSVMEAVIKSYSDEPSQVSSTTERATQNRISITISVTYKDLVTKKTLFTQSFTGISDYAIGDFT
AQQESIEEAIDQVSDDILNRLLAGAGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20797; Mature: 20797

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFSDELSLSIFKIFTMISKTRLFLLFFFFLMATLSGCYSFSEGSLPSHIKTIAIPVFGD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEEEEEECC
ESSSGIGQLREQLTTKMVDHVQSQSSLVIEQDRRLANSVMEAVIKSYSDEPSQVSSTTER
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
ATQNRISITISVTYKDLVTKKTLFTQSFTGISDYAIGDFTAQQESIEEAIDQVSDDILNR
HHHCEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LLAGAGW
HHHCCCC
>Mature Secondary Structure
MIFSDELSLSIFKIFTMISKTRLFLLFFFFLMATLSGCYSFSEGSLPSHIKTIAIPVFGD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEEEEEECC
ESSSGIGQLREQLTTKMVDHVQSQSSLVIEQDRRLANSVMEAVIKSYSDEPSQVSSTTER
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
ATQNRISITISVTYKDLVTKKTLFTQSFTGISDYAIGDFTAQQESIEEAIDQVSDDILNR
HHHCEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LLAGAGW
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA