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The map label for this gene is yqeN [H]

Identifier: 193214172

GI number: 193214172

Start: 532185

End: 533243

Strand: Direct

Name: yqeN [H]

Synonym: Ctha_0453

Alternate gene names: 193214172

Gene position: 532185-533243 (Clockwise)

Preceding gene: 193214168

Following gene: 193214173

Centisome position: 16.16

GC content: 46.55

Gene sequence:

>1059_bases
TTGGCCAAAAAAGCTGTTTTTAACGACATCGAAGCCGCGCTGAAACAAAAGCGTTTTCAGCCGATTTATTTTTTCTTCGG
GCGCGAGGATTTTTTGATCGAAGAACTCGTCCGCATTATTAAAGCTGAAGCGTTTCATAGCGCGGAGGATTCGAACTTGA
ACTTCACGCTGCTTTATGGTGAAGAGCAAACGCTTGGCGATGTGGTTTCTGTTGCGTCGGAATATCCCATGTTTTCGGAA
CGGCGGCTTGTTGTTGTCAAATCGTTCGACAAGCTCAAAAAAGATCGCAGCCGCGAGAAGCAAAAAGCGCAAACCGCACT
TTTTACTGAATACCTCAAAAATCCGCTGCCGTCAACCATTTTGGTTCTAACCACAGGCAAACTCGACAAAGCCACGCTTT
CAAAAGAACCGTTTCCATTGCTACAGTCATTTTCTTATGAGTTTGACCAAATTCAAGACGCTGGCCGTTTTGCCGAAGAA
CGCGCGAAACGCTACGGATGGACGCTTAGCCCGCAAGCCATTAAAATTTTGGTGACTTTTGCCGGAAACTCTGCTCGCGA
ACTGGACGCTGAAATTCAAAAGCTCTCGCTTTTTGCGGATGGCAAATCTGGTGAAAAAATCCTGACCGACGCCGAAGTGC
TTCAAACCGTCGGACTTTCCCGCGAATACAACGTGTTTGAATTGGACAAAGCGATTGTTGCAGGCGATCTTCGCATGGCC
AGCGGCATTGCCCTGATGATTCTCGAACACGAAGGCGAAAAAACCGGCCTTTTCGCCATTTTGAACTACCTCATCATGTT
TTTCACGCGGCTTTGGAAATTGAAAATGCCCGCCGTGCAGCGCATGACTCACGCCGACATCGCCAAAGAACTTGGCATGT
ATGGCTCGCAAGCGTATTTCCTAAAAGACTATCTTTCTTACACCGGACGCTTTTCCGTTTTGCAAATCGAAAATGCGCTG
ATTGCGCTCCACGAAGCGGATTTAGCGCTAAAAGGCATTTTGCCCATTCAGGATGAAAAACTCTTGATTCTTTCACTTAT
GCGAAAAATTTTAACCTAA

Upstream 100 bases:

>100_bases
GCAACTATTTGTCGCCCATTTTGCAGCGCGCTATTTTTATCACGGATTCTTTATTTTAGCTGGAAACCATTTAGCTAACC
TTGATAAACCGATCGGACTT

Downstream 100 bases:

>100_bases
CCGTTTTTGGCAAGAAATAGAACCGTTTCTTTTTTTTCGCTGAAAACACGAAAACGAAAAAATGGCGTTTAGTAGAACCT
CTCTTTTTTGCGATTAACCT

Product: DNA polymerase III subunit delta

Products: diphosphate; DNAn+1

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MAKKAVFNDIEAALKQKRFQPIYFFFGREDFLIEELVRIIKAEAFHSAEDSNLNFTLLYGEEQTLGDVVSVASEYPMFSE
RRLVVVKSFDKLKKDRSREKQKAQTALFTEYLKNPLPSTILVLTTGKLDKATLSKEPFPLLQSFSYEFDQIQDAGRFAEE
RAKRYGWTLSPQAIKILVTFAGNSARELDAEIQKLSLFADGKSGEKILTDAEVLQTVGLSREYNVFELDKAIVAGDLRMA
SGIALMILEHEGEKTGLFAILNYLIMFFTRLWKLKMPAVQRMTHADIAKELGMYGSQAYFLKDYLSYTGRFSVLQIENAL
IALHEADLALKGILPIQDEKLLILSLMRKILT

Sequences:

>Translated_352_residues
MAKKAVFNDIEAALKQKRFQPIYFFFGREDFLIEELVRIIKAEAFHSAEDSNLNFTLLYGEEQTLGDVVSVASEYPMFSE
RRLVVVKSFDKLKKDRSREKQKAQTALFTEYLKNPLPSTILVLTTGKLDKATLSKEPFPLLQSFSYEFDQIQDAGRFAEE
RAKRYGWTLSPQAIKILVTFAGNSARELDAEIQKLSLFADGKSGEKILTDAEVLQTVGLSREYNVFELDKAIVAGDLRMA
SGIALMILEHEGEKTGLFAILNYLIMFFTRLWKLKMPAVQRMTHADIAKELGMYGSQAYFLKDYLSYTGRFSVLQIENAL
IALHEADLALKGILPIQDEKLLILSLMRKILT
>Mature_351_residues
AKKAVFNDIEAALKQKRFQPIYFFFGREDFLIEELVRIIKAEAFHSAEDSNLNFTLLYGEEQTLGDVVSVASEYPMFSER
RLVVVKSFDKLKKDRSREKQKAQTALFTEYLKNPLPSTILVLTTGKLDKATLSKEPFPLLQSFSYEFDQIQDAGRFAEER
AKRYGWTLSPQAIKILVTFAGNSARELDAEIQKLSLFADGKSGEKILTDAEVLQTVGLSREYNVFELDKAIVAGDLRMAS
GIALMILEHEGEKTGLFAILNYLIMFFTRLWKLKMPAVQRMTHADIAKELGMYGSQAYFLKDYLSYTGRFSVLQIENALI
ALHEADLALKGILPIQDEKLLILSLMRKILT

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008921
- InterPro:   IPR010372
- InterPro:   IPR005790 [H]

Pfam domain/function: PF06144 DNA_pol3_delta [H]

EC number: 2.7.7.7

Molecular weight: Translated: 40014; Mature: 39883

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKAVFNDIEAALKQKRFQPIYFFFGREDFLIEELVRIIKAEAFHSAEDSNLNFTLLYG
CCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
EEQTLGDVVSVASEYPMFSERRLVVVKSFDKLKKDRSREKQKAQTALFTEYLKNPLPSTI
CCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
LVLTTGKLDKATLSKEPFPLLQSFSYEFDQIQDAGRFAEERAKRYGWTLSPQAIKILVTF
EEEECCCCCHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEE
AGNSARELDAEIQKLSLFADGKSGEKILTDAEVLQTVGLSREYNVFELDKAIVAGDLRMA
CCCCHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHH
SGIALMILEHEGEKTGLFAILNYLIMFFTRLWKLKMPAVQRMTHADIAKELGMYGSQAYF
CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHH
LKDYLSYTGRFSVLQIENALIALHEADLALKGILPIQDEKLLILSLMRKILT
HHHHHHHCCCEEEEEECCCEEEEEHHCCCEECCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
AKKAVFNDIEAALKQKRFQPIYFFFGREDFLIEELVRIIKAEAFHSAEDSNLNFTLLYG
CCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
EEQTLGDVVSVASEYPMFSERRLVVVKSFDKLKKDRSREKQKAQTALFTEYLKNPLPSTI
CCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
LVLTTGKLDKATLSKEPFPLLQSFSYEFDQIQDAGRFAEERAKRYGWTLSPQAIKILVTF
EEEECCCCCHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEE
AGNSARELDAEIQKLSLFADGKSGEKILTDAEVLQTVGLSREYNVFELDKAIVAGDLRMA
CCCCHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHH
SGIALMILEHEGEKTGLFAILNYLIMFFTRLWKLKMPAVQRMTHADIAKELGMYGSQAYF
CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHH
LKDYLSYTGRFSVLQIENALIALHEADLALKGILPIQDEKLLILSLMRKILT
HHHHHHHCCCEEEEEECCCEEEEEHHCCCEECCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]