| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214173
Identifier: 193214173
GI number: 193214173
Start: 533365
End: 534333
Strand: Direct
Name: 193214173
Synonym: Ctha_0454
Alternate gene names: NA
Gene position: 533365-534333 (Clockwise)
Preceding gene: 193214172
Following gene: 193214174
Centisome position: 16.19
GC content: 46.85
Gene sequence:
>969_bases ATGTCAGAGTCAAAGAAAAAAAACGTTGAAACGCTTGGAAGTCGCGCACGAAAAGCCGTTAGGAAACATTATAAAAAAAT CCTGCGGCACGAGCAGCCTGTGCGTGAGGATAAAGATCCAGAAGAACTTCATCAAATGCGCGTTGCGATGCGGCGTTTGC GCTCGGTGGCAAGCGGGTTTTCTCCAATTTTGAGCTTGCCAAAAGCGGCCTCGCAAAAGCAAATCGGAAAATTTTCCCGC ACGCTCGGCGCGCTGCGCGATCTCGACATTTTGCTTGAAAGCTTAGAAAAGCGCTATGCACCTGAACTTCTGAAAAGGGA AAAGCCCCATTTTCAGAAAATGGTATTCGAGCTTTATGCCCGGCGCAGCATGATTTTAGCAACGGTTCGCGACATGCTCG CCAGCGAAAGTTATGCGGCTTTTAAATCCGCAATGGACGATTGGCTGAAAGTGCCTGAGATGAACCGAACTTCACAAATG CCGATTCAGAGCGCGTTGCCGGATTTGCTTTTCCCAATGGTCAATCAACTTTTTTTGCATGAAGGCTGGATGCCTGGCGT TAGGCTACATCGCGGCGAGCTTATTCCACCTGACAATTTCTCGTTAAGAAAGCTCAATTTTTTGCTCAAAACAGAAGGCT CACTTTTGCACGACTTGCGAAAACAAATCAAGCGCGTGCGTTATCAATTGGCTTTTTTCACCGACCTTTATGGCGAAACT TACACCGCTTATGTTAACGACACGAAACACATGCAAGACATGCTCGGCCTGATTCAAGACAGTTTGGTGCTCGAAGCCAC CTTACAAGAATTTCACGGCGAACTGTATAAAAAAAGAATCCCAACGGTGGTGAAAATGCTCATGGCTGAGCGGCTTGCCG CTTGGCAAGAATGGGAAAAAATCAGAACCATTTACTTGCTTGAGGAAACCCGCGATAACTTCCGCAGGGAACTCTTGAAC TTGAAATAA
Upstream 100 bases:
>100_bases ACCGTTTCTTTTTTTTCGCTGAAAACACGAAAACGAAAAAATGGCGTTTAGTAGAACCTCTCTTTTTTGCGATTAACCTG AACGATGAAAGAGCACTTAC
Downstream 100 bases:
>100_bases ATTCGGGATTTAACACGCACTTGAAAAATGAATAGCGCTCGCCGTCACTTTTGCAGCATTCAAAAAGCTGGCTTGGAGTT TTTTTCCGATTCTTTTTTAA
Product: CHAD domain-containing protein
Products: NA
Alternate protein names: CHAD Domain Containing Protein; CHAD Domain Superfamily
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSESKKKNVETLGSRARKAVRKHYKKILRHEQPVREDKDPEELHQMRVAMRRLRSVASGFSPILSLPKAASQKQIGKFSR TLGALRDLDILLESLEKRYAPELLKREKPHFQKMVFELYARRSMILATVRDMLASESYAAFKSAMDDWLKVPEMNRTSQM PIQSALPDLLFPMVNQLFLHEGWMPGVRLHRGELIPPDNFSLRKLNFLLKTEGSLLHDLRKQIKRVRYQLAFFTDLYGET YTAYVNDTKHMQDMLGLIQDSLVLEATLQEFHGELYKKRIPTVVKMLMAERLAAWQEWEKIRTIYLLEETRDNFRRELLN LK
Sequences:
>Translated_322_residues MSESKKKNVETLGSRARKAVRKHYKKILRHEQPVREDKDPEELHQMRVAMRRLRSVASGFSPILSLPKAASQKQIGKFSR TLGALRDLDILLESLEKRYAPELLKREKPHFQKMVFELYARRSMILATVRDMLASESYAAFKSAMDDWLKVPEMNRTSQM PIQSALPDLLFPMVNQLFLHEGWMPGVRLHRGELIPPDNFSLRKLNFLLKTEGSLLHDLRKQIKRVRYQLAFFTDLYGET YTAYVNDTKHMQDMLGLIQDSLVLEATLQEFHGELYKKRIPTVVKMLMAERLAAWQEWEKIRTIYLLEETRDNFRRELLN LK >Mature_321_residues SESKKKNVETLGSRARKAVRKHYKKILRHEQPVREDKDPEELHQMRVAMRRLRSVASGFSPILSLPKAASQKQIGKFSRT LGALRDLDILLESLEKRYAPELLKREKPHFQKMVFELYARRSMILATVRDMLASESYAAFKSAMDDWLKVPEMNRTSQMP IQSALPDLLFPMVNQLFLHEGWMPGVRLHRGELIPPDNFSLRKLNFLLKTEGSLLHDLRKQIKRVRYQLAFFTDLYGETY TAYVNDTKHMQDMLGLIQDSLVLEATLQEFHGELYKKRIPTVVKMLMAERLAAWQEWEKIRTIYLLEETRDNFRRELLNL K
Specific function: Unknown
COG id: COG5607
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37903; Mature: 37772
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESKKKNVETLGSRARKAVRKHYKKILRHEQPVREDKDPEELHQMRVAMRRLRSVASGF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCH SPILSLPKAASQKQIGKFSRTLGALRDLDILLESLEKRYAPELLKREKPHFQKMVFELYA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RRSMILATVRDMLASESYAAFKSAMDDWLKVPEMNRTSQMPIQSALPDLLFPMVNQLFLH HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH EGWMPGVRLHRGELIPPDNFSLRKLNFLLKTEGSLLHDLRKQIKRVRYQLAFFTDLYGET CCCCCCCEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH YTAYVNDTKHMQDMLGLIQDSLVLEATLQEFHGELYKKRIPTVVKMLMAERLAAWQEWEK HEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRTIYLLEETRDNFRRELLNLK HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SESKKKNVETLGSRARKAVRKHYKKILRHEQPVREDKDPEELHQMRVAMRRLRSVASGF CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCH SPILSLPKAASQKQIGKFSRTLGALRDLDILLESLEKRYAPELLKREKPHFQKMVFELYA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RRSMILATVRDMLASESYAAFKSAMDDWLKVPEMNRTSQMPIQSALPDLLFPMVNQLFLH HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH EGWMPGVRLHRGELIPPDNFSLRKLNFLLKTEGSLLHDLRKQIKRVRYQLAFFTDLYGET CCCCCCCEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH YTAYVNDTKHMQDMLGLIQDSLVLEATLQEFHGELYKKRIPTVVKMLMAERLAAWQEWEK HEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRTIYLLEETRDNFRRELLNLK HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA