| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214018
Identifier: 193214018
GI number: 193214018
Start: 339704
End: 341128
Strand: Direct
Name: 193214018
Synonym: Ctha_0299
Alternate gene names: NA
Gene position: 339704-341128 (Clockwise)
Preceding gene: 193214014
Following gene: 193214019
Centisome position: 10.31
GC content: 47.65
Gene sequence:
>1425_bases ATGGTAGGGAAATATTTACGTAGAATCGGGTTTTATTTACTCACTGCCATTCTGTTTTTTTCGCAATCCTCACAGGCGCA GGCAAATGATGAGGAAACCAGAGGCACCGATAGCTACTCGCTCTATCAGGAAAATCCGGTGATGAACGCGTTTACGGGCG GAATGGGCATTACAGTTTTCGACGATGAGGTGTATTATAATCTTTACCTCGCCCCGGAACTTGTGCTTGGAAAAGTCGGC ATTGGGTTCGATGTAAATCTTCGAATCGGGACAGATGGAAAACTTCGAAAAGAAGACTGGGATGACGACGTTTCAAGTTA CTTGCGACTCATTCGATATGTGCGCTACGGCAATAAATTCGATAGCCTTTATGTTCGTGTTGGGCAGCTCGAAGCAACTC GGCTTGGGCATGGCTCGCTGATGTATATGTATCGCAACAATGGCAGCTACGACACGCGAAAAATTGGCTTGGAGTTCGAT ATGGACTTTGCCAAATGGGGATTTGAAAGCATGGTAAGCGACTTGACAAGTTTTGATCTCGTTGGCGTGCGAGGCTACAT GCGCCCCCTGCTTGAGAGCAACCTTCCGATTATCGATCAACTGGAAGTTGGCGCTTCACTTGTCAGCGATTTTCGCGACA ACACCAATCTGGTTGCAACCACACAAAGCCTGAGATCCGCTTATTCGGAAAATGGCCAAATTGCATTTAACCCATCGCTG GCAAATCGTGAATCGTCGTTGATGGCGTGGAGCGTGGATTTAGGTCTGCCACTAATTCGCTTGCCAATCCTTGAAATCGA AGGCTATATGGATTATGCAAAAATCGTGGATTATGGCTCTGGCGGTCTGATCGGCTTGAGCGCCTCGCTAAAAAATATTA CCAGCATCGCCACGTTTTCGGCGCGACTTGAGCATCGCGTAGCCGGCGACCAGTTCCAATTTTCTTACTTCGATGCGCTT TATGAACAAGATCGTTTTGAGACCATTCAAAACTTCGGCGACTCCAGCGTTGTTCGCACACGAGCCAATGAATTGGCCAA TTACACCTCGCCCGGGCCTGGCGTTTATGGCGATCTCGGCGCAACCATTTTGAGCTCCATTCGACTTTGGGGAAGCTATC AGCGCTTATACAACACCAAGCAAAGCGGACAGCTTCATCTCAGTGCGGGCTTGAAGGAACTCATTCCGCAAGTGCTTTTG AAAGCCGATTATTACAAACGCGACGTTGGCTCGGAAACGGAAGTTTTTACGTTAGATGATCGCAGTCTGGCATTAGTAGA GTTTGGCTACTATCCACAGCCTTATATGCTGCTTTCGATCATTTACCAGTGGACATATTTGCCCGTGCGCAATGGGGATG AAGTCATTGGCTACGAACCTATTCGACGCATTGAGCCTCGCGTCTCATTAAATTTTCAGTTTTAA
Upstream 100 bases:
>100_bases GTTTTCAGTCTCTCTGATATTTGAATTAACTTTATAGATTGAAACAATAATAACTTAATCTGTCTCCCGCCGGATTAAAA AACAAAAATCATACGAAAAA
Downstream 100 bases:
>100_bases CTTTCCTATGGCGTAAGGTTGGTGTCTTTGGAAAAGAAAGTGAATATATTATATACTAAAGCTGAACGTCACAAAAGGTA ATAATGTTGGGCATTTATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MVGKYLRRIGFYLLTAILFFSQSSQAQANDEETRGTDSYSLYQENPVMNAFTGGMGITVFDDEVYYNLYLAPELVLGKVG IGFDVNLRIGTDGKLRKEDWDDDVSSYLRLIRYVRYGNKFDSLYVRVGQLEATRLGHGSLMYMYRNNGSYDTRKIGLEFD MDFAKWGFESMVSDLTSFDLVGVRGYMRPLLESNLPIIDQLEVGASLVSDFRDNTNLVATTQSLRSAYSENGQIAFNPSL ANRESSLMAWSVDLGLPLIRLPILEIEGYMDYAKIVDYGSGGLIGLSASLKNITSIATFSARLEHRVAGDQFQFSYFDAL YEQDRFETIQNFGDSSVVRTRANELANYTSPGPGVYGDLGATILSSIRLWGSYQRLYNTKQSGQLHLSAGLKELIPQVLL KADYYKRDVGSETEVFTLDDRSLALVEFGYYPQPYMLLSIIYQWTYLPVRNGDEVIGYEPIRRIEPRVSLNFQF
Sequences:
>Translated_474_residues MVGKYLRRIGFYLLTAILFFSQSSQAQANDEETRGTDSYSLYQENPVMNAFTGGMGITVFDDEVYYNLYLAPELVLGKVG IGFDVNLRIGTDGKLRKEDWDDDVSSYLRLIRYVRYGNKFDSLYVRVGQLEATRLGHGSLMYMYRNNGSYDTRKIGLEFD MDFAKWGFESMVSDLTSFDLVGVRGYMRPLLESNLPIIDQLEVGASLVSDFRDNTNLVATTQSLRSAYSENGQIAFNPSL ANRESSLMAWSVDLGLPLIRLPILEIEGYMDYAKIVDYGSGGLIGLSASLKNITSIATFSARLEHRVAGDQFQFSYFDAL YEQDRFETIQNFGDSSVVRTRANELANYTSPGPGVYGDLGATILSSIRLWGSYQRLYNTKQSGQLHLSAGLKELIPQVLL KADYYKRDVGSETEVFTLDDRSLALVEFGYYPQPYMLLSIIYQWTYLPVRNGDEVIGYEPIRRIEPRVSLNFQF >Mature_474_residues MVGKYLRRIGFYLLTAILFFSQSSQAQANDEETRGTDSYSLYQENPVMNAFTGGMGITVFDDEVYYNLYLAPELVLGKVG IGFDVNLRIGTDGKLRKEDWDDDVSSYLRLIRYVRYGNKFDSLYVRVGQLEATRLGHGSLMYMYRNNGSYDTRKIGLEFD MDFAKWGFESMVSDLTSFDLVGVRGYMRPLLESNLPIIDQLEVGASLVSDFRDNTNLVATTQSLRSAYSENGQIAFNPSL ANRESSLMAWSVDLGLPLIRLPILEIEGYMDYAKIVDYGSGGLIGLSASLKNITSIATFSARLEHRVAGDQFQFSYFDAL YEQDRFETIQNFGDSSVVRTRANELANYTSPGPGVYGDLGATILSSIRLWGSYQRLYNTKQSGQLHLSAGLKELIPQVLL KADYYKRDVGSETEVFTLDDRSLALVEFGYYPQPYMLLSIIYQWTYLPVRNGDEVIGYEPIRRIEPRVSLNFQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53686; Mature: 53686
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGKYLRRIGFYLLTAILFFSQSSQAQANDEETRGTDSYSLYQENPVMNAFTGGMGITVF CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCEEEEEE DDEVYYNLYLAPELVLGKVGIGFDVNLRIGTDGKLRKEDWDDDVSSYLRLIRYVRYGNKF ECCEEEEEEECCCCEEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC DSLYVRVGQLEATRLGHGSLMYMYRNNGSYDTRKIGLEFDMDFAKWGFESMVSDLTSFDL CEEEEEECCEEEEECCCCEEEEEEECCCCCCCEEEEEEECCHHHHCCHHHHHHHHHHHHH VGVRGYMRPLLESNLPIIDQLEVGASLVSDFRDNTNLVATTQSLRSAYSENGQIAFNPSL HHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCEEECCCC ANRESSLMAWSVDLGLPLIRLPILEIEGYMDYAKIVDYGSGGLIGLSASLKNITSIATFS CCCCCCEEEEEECCCCCCHHEEEEEECCCHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHH ARLEHRVAGDQFQFSYFDALYEQDRFETIQNFGDSSVVRTRANELANYTSPGPGVYGDLG HHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHH ATILSSIRLWGSYQRLYNTKQSGQLHLSAGLKELIPQVLLKADYYKRDVGSETEVFTLDD HHHHHHHHHHHHHHHHHCCCCCCEEEEHHCHHHHHHHHHHHHHHHHHCCCCCCEEEEECC RSLALVEFGYYPQPYMLLSIIYQWTYLPVRNGDEVIGYEPIRRIEPRVSLNFQF CCEEEEEECCCCCHHHHHHHHHHHHEEEECCCCCEECCCCHHHCCCCEEEEECC >Mature Secondary Structure MVGKYLRRIGFYLLTAILFFSQSSQAQANDEETRGTDSYSLYQENPVMNAFTGGMGITVF CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCEEEEEE DDEVYYNLYLAPELVLGKVGIGFDVNLRIGTDGKLRKEDWDDDVSSYLRLIRYVRYGNKF ECCEEEEEEECCCCEEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC DSLYVRVGQLEATRLGHGSLMYMYRNNGSYDTRKIGLEFDMDFAKWGFESMVSDLTSFDL CEEEEEECCEEEEECCCCEEEEEEECCCCCCCEEEEEEECCHHHHCCHHHHHHHHHHHHH VGVRGYMRPLLESNLPIIDQLEVGASLVSDFRDNTNLVATTQSLRSAYSENGQIAFNPSL HHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCEEECCCC ANRESSLMAWSVDLGLPLIRLPILEIEGYMDYAKIVDYGSGGLIGLSASLKNITSIATFS CCCCCCEEEEEECCCCCCHHEEEEEECCCHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHH ARLEHRVAGDQFQFSYFDALYEQDRFETIQNFGDSSVVRTRANELANYTSPGPGVYGDLG HHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHH ATILSSIRLWGSYQRLYNTKQSGQLHLSAGLKELIPQVLLKADYYKRDVGSETEVFTLDD HHHHHHHHHHHHHHHHHCCCCCCEEEEHHCHHHHHHHHHHHHHHHHHCCCCCCEEEEECC RSLALVEFGYYPQPYMLLSIIYQWTYLPVRNGDEVIGYEPIRRIEPRVSLNFQF CCEEEEEECCCCCHHHHHHHHHHHHEEEECCCCCEECCCCHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA