| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214013
Identifier: 193214013
GI number: 193214013
Start: 333680
End: 335902
Strand: Direct
Name: 193214013
Synonym: Ctha_0294
Alternate gene names: NA
Gene position: 333680-335902 (Clockwise)
Preceding gene: 193214012
Following gene: 193214014
Centisome position: 10.13
GC content: 46.38
Gene sequence:
>2223_bases ATGATGCGAGGGATTTATCTTGCCGCCGTTTTTGCGCTGGTGATACTTTTTTGCGGCGGCTGCGCACGCGACGACGATAG CCTTTTTGGAAAAGCTTATCACAATTTTTCTGCGTACTTCAACGCGTACTACAACGCCAGCATTGAATTTGAAAAAGGCA TTTCAGCCATGCGCGAGGCGCAAACTTTTAGCGCCAGCGATAACCTTCATATTTTTTCAAAAACTGAAAACAACACCGCA GGCAAAGCTAATTTTGAAAAAGTCATCACCAAAACCTCCGAAATTCTTAAGTCCCATCCGGTAAGCGATTTGGCCGATAA CGCCTTGTTGCTCATGGGAAAAGCTTATTTCTACACGAATGAATTGCAACCTGCCGAGCGAAAATTCAAAGAAATCCTGA CCAATTATCCCGACAGCGATATTTTTGACGAAGCTTCTTTTTGGTATGGCCGAACGCTGACGCGCCAATTTCACACAGAG GAAGCCGCCGAGATTCTGCGTTCGATTATGAAATCCAGCAAAACATCCGATGTCGTAATGGCAAAATGCTATTTTTCGCT CGCCGAATTAGCCATCAATGAGGGAAACTTGGAAGAAGCTGCCATGCTAATTGAATCCGGCCTGGCTTTGGAAGATAGTG AGGATTTAAAAACACTTGCGGCCTATACGCTCGCCAGAATCTACGATCAGCTTCATCGTTTCAAGAAAGCTGCGGAAACC TACACCTTTCTTTTGAACTTGAGCCCGAGCTACGAGATGCACTACATCGCGCAATTGAATACCGGCATTGCATTGCGCGA ACAATCGCGCGCGCGCCTTGCCATCAAAATTTTTCAAGATTTACTTGCCGACGATAACAATCTCGAAAACTTCGGAGAAA TTCGTTTTGAACTGGCTACCGCTTATGCTCAAAATGATGAGTTAGGCAAAGCGTTTGATTTATATCAAGAAATTATTTAT CGCCACCCGGGCACAGAAGCTGCCGCAAAAAGCTTCTACCAACTGGGCAAATTGCGAATGGAAATTTCCCAGGATTTGAC GATGGCAAAAACCCTATTTGATAGCGCAAAAGCCGCTTACCCAAAAGGCGACATCGCCAAAAAAGCGCAAGAGCAATCCA CCACACTCAAAAATTTGCTCGATCTCTACGACGAAACCATTCAATTAGACAGCACGATTCAATTGGGCATTCTTGCCACA GCCGATGTGCTGGCAGAAGATACGGCGCTGCCCAACGACTCGCTTGAAAGCGAGCCTGCGCCCAAAAAAGAAGAACCTCC CAGAAAACGCACCCGGCAGGATTATCGCAAAAGCGCTTTCTTAGCACGCGGCGCGCACGATGCGTTCAACGAAACAACCA CGCAAAAAAGCAGCACAAGCACCAAACCCAAATTTCAGCCAGCGGCCAACGAGGCGGCACTCAAACAATATCAAATTCAA GCAATTGAAAATCGCATCGCGTTAGGCAGATTTTATCACCTCACCATGCAAACCCCCGACTCGGCACTGAGTTGGTACAC TCAAGCGTTGCGCAAAATCCAAGCCGATAGCAGCGATAAACTGGCAACCCTTCGAGAAGTCGTGCTGTTCTCGCTGTCCG ACATTTACCGAAATTTAGGCGACACCACGCAGATGGATTCCGTTTATAAAGTGCTGCTCGCCGATTTTCCCGAAAGTGCC TACATCAATCGTGTGCGCGAGCATTTCAACCTGCCCAAACTCAGGCGCGGCGAAAATGCTCCCGAACAAATCCTTTATAC CAACGCGATTCAAACGCTTGAAAATAGCCAAGCCGATACGTCGTTAGCGATGCTGAAAACCTTGCTATCGCGCTACCCAA ACTCTGCACTCATTCCTAAAGTGCTGCTTGGCATCGGTTTTATTTATGAAAATAATTTGAGCGAACCGGATTCGGCGATT CTTGCCTATCAAAAATTGGCTGCTGACTATCCAAAATCAGAGGAAGCCAAACATGTTAAAAATAAATTGGATGCCGTGCA AAGTCGCGCCAAGCTAATCCCAACGACGCCTGATGATAAAATTGAATTGCCGGAAAAACCGCCTACGCCCGCACCCGAAA TGAATCGGCTTGAGCGGTTTCCTATCAAAAAAGATTCAACAAAGGCAAATGGAGTGCAACCAGAATTACAAAAAATGATT AAATTCGCCGGCAATCGAGCCGATTCTGTGCAACACAATCCCGAAAAGCAAAATTTAGAATGA
Upstream 100 bases:
>100_bases TGAACCGGCCATCTTTCGCCAATAGGCAAATCGTGGGCTTTGCCTTTAGCCTCGCAATGTCCATATTTCGGTTTTCTCAC CTGTTACCGCTGTTTGGCTG
Downstream 100 bases:
>100_bases CACACATGACTGAAGCCACGACCAAAGCTGATGATATTTTTGACCTCTCACTAACCGTTCAAGAAACCACCCAACTCAAT GCAACAACTGCCGTTCTTGC
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: TPR Repeat-Containing Protein; TPR Domain Protein; Tetratricopeptide Repeat Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein
Number of amino acids: Translated: 740; Mature: 740
Protein sequence:
>740_residues MMRGIYLAAVFALVILFCGGCARDDDSLFGKAYHNFSAYFNAYYNASIEFEKGISAMREAQTFSASDNLHIFSKTENNTA GKANFEKVITKTSEILKSHPVSDLADNALLLMGKAYFYTNELQPAERKFKEILTNYPDSDIFDEASFWYGRTLTRQFHTE EAAEILRSIMKSSKTSDVVMAKCYFSLAELAINEGNLEEAAMLIESGLALEDSEDLKTLAAYTLARIYDQLHRFKKAAET YTFLLNLSPSYEMHYIAQLNTGIALREQSRARLAIKIFQDLLADDNNLENFGEIRFELATAYAQNDELGKAFDLYQEIIY RHPGTEAAAKSFYQLGKLRMEISQDLTMAKTLFDSAKAAYPKGDIAKKAQEQSTTLKNLLDLYDETIQLDSTIQLGILAT ADVLAEDTALPNDSLESEPAPKKEEPPRKRTRQDYRKSAFLARGAHDAFNETTTQKSSTSTKPKFQPAANEAALKQYQIQ AIENRIALGRFYHLTMQTPDSALSWYTQALRKIQADSSDKLATLREVVLFSLSDIYRNLGDTTQMDSVYKVLLADFPESA YINRVREHFNLPKLRRGENAPEQILYTNAIQTLENSQADTSLAMLKTLLSRYPNSALIPKVLLGIGFIYENNLSEPDSAI LAYQKLAADYPKSEEAKHVKNKLDAVQSRAKLIPTTPDDKIELPEKPPTPAPEMNRLERFPIKKDSTKANGVQPELQKMI KFAGNRADSVQHNPEKQNLE
Sequences:
>Translated_740_residues MMRGIYLAAVFALVILFCGGCARDDDSLFGKAYHNFSAYFNAYYNASIEFEKGISAMREAQTFSASDNLHIFSKTENNTA GKANFEKVITKTSEILKSHPVSDLADNALLLMGKAYFYTNELQPAERKFKEILTNYPDSDIFDEASFWYGRTLTRQFHTE EAAEILRSIMKSSKTSDVVMAKCYFSLAELAINEGNLEEAAMLIESGLALEDSEDLKTLAAYTLARIYDQLHRFKKAAET YTFLLNLSPSYEMHYIAQLNTGIALREQSRARLAIKIFQDLLADDNNLENFGEIRFELATAYAQNDELGKAFDLYQEIIY RHPGTEAAAKSFYQLGKLRMEISQDLTMAKTLFDSAKAAYPKGDIAKKAQEQSTTLKNLLDLYDETIQLDSTIQLGILAT ADVLAEDTALPNDSLESEPAPKKEEPPRKRTRQDYRKSAFLARGAHDAFNETTTQKSSTSTKPKFQPAANEAALKQYQIQ AIENRIALGRFYHLTMQTPDSALSWYTQALRKIQADSSDKLATLREVVLFSLSDIYRNLGDTTQMDSVYKVLLADFPESA YINRVREHFNLPKLRRGENAPEQILYTNAIQTLENSQADTSLAMLKTLLSRYPNSALIPKVLLGIGFIYENNLSEPDSAI LAYQKLAADYPKSEEAKHVKNKLDAVQSRAKLIPTTPDDKIELPEKPPTPAPEMNRLERFPIKKDSTKANGVQPELQKMI KFAGNRADSVQHNPEKQNLE >Mature_740_residues MMRGIYLAAVFALVILFCGGCARDDDSLFGKAYHNFSAYFNAYYNASIEFEKGISAMREAQTFSASDNLHIFSKTENNTA GKANFEKVITKTSEILKSHPVSDLADNALLLMGKAYFYTNELQPAERKFKEILTNYPDSDIFDEASFWYGRTLTRQFHTE EAAEILRSIMKSSKTSDVVMAKCYFSLAELAINEGNLEEAAMLIESGLALEDSEDLKTLAAYTLARIYDQLHRFKKAAET YTFLLNLSPSYEMHYIAQLNTGIALREQSRARLAIKIFQDLLADDNNLENFGEIRFELATAYAQNDELGKAFDLYQEIIY RHPGTEAAAKSFYQLGKLRMEISQDLTMAKTLFDSAKAAYPKGDIAKKAQEQSTTLKNLLDLYDETIQLDSTIQLGILAT ADVLAEDTALPNDSLESEPAPKKEEPPRKRTRQDYRKSAFLARGAHDAFNETTTQKSSTSTKPKFQPAANEAALKQYQIQ AIENRIALGRFYHLTMQTPDSALSWYTQALRKIQADSSDKLATLREVVLFSLSDIYRNLGDTTQMDSVYKVLLADFPESA YINRVREHFNLPKLRRGENAPEQILYTNAIQTLENSQADTSLAMLKTLLSRYPNSALIPKVLLGIGFIYENNLSEPDSAI LAYQKLAADYPKSEEAKHVKNKLDAVQSRAKLIPTTPDDKIELPEKPPTPAPEMNRLERFPIKKDSTKANGVQPELQKMI KFAGNRADSVQHNPEKQNLE
Specific function: Unknown
COG id: COG1729
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83375; Mature: 83375
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRGIYLAAVFALVILFCGGCARDDDSLFGKAYHNFSAYFNAYYNASIEFEKGISAMREA CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHH QTFSASDNLHIFSKTENNTAGKANFEKVITKTSEILKSHPVSDLADNALLLMGKAYFYTN HHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECHHHHEEC ELQPAERKFKEILTNYPDSDIFDEASFWYGRTLTRQFHTEEAAEILRSIMKSSKTSDVVM CCCHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH AKCYFSLAELAINEGNLEEAAMLIESGLALEDSEDLKTLAAYTLARIYDQLHRFKKAAET HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YTFLLNLSPSYEMHYIAQLNTGIALREQSRARLAIKIFQDLLADDNNLENFGEIRFELAT EEEEEECCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AYAQNDELGKAFDLYQEIIYRHPGTEAAAKSFYQLGKLRMEISQDLTMAKTLFDSAKAAY HHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PKGDIAKKAQEQSTTLKNLLDLYDETIQLDSTIQLGILATADVLAEDTALPNDSLESEPA CCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCC PKKEEPPRKRTRQDYRKSAFLARGAHDAFNETTTQKSSTSTKPKFQPAANEAALKQYQIQ CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH AIENRIALGRFYHLTMQTPDSALSWYTQALRKIQADSSDKLATLREVVLFSLSDIYRNLG HHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC DTTQMDSVYKVLLADFPESAYINRVREHFNLPKLRRGENAPEQILYTNAIQTLENSQADT CCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHCCCHHH SLAMLKTLLSRYPNSALIPKVLLGIGFIYENNLSEPDSAILAYQKLAADYPKSEEAKHVK HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH NKLDAVQSRAKLIPTTPDDKIELPEKPPTPAPEMNRLERFPIKKDSTKANGVQPELQKMI HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHH KFAGNRADSVQHNPEKQNLE HHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMRGIYLAAVFALVILFCGGCARDDDSLFGKAYHNFSAYFNAYYNASIEFEKGISAMREA CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHH QTFSASDNLHIFSKTENNTAGKANFEKVITKTSEILKSHPVSDLADNALLLMGKAYFYTN HHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECHHHHEEC ELQPAERKFKEILTNYPDSDIFDEASFWYGRTLTRQFHTEEAAEILRSIMKSSKTSDVVM CCCHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH AKCYFSLAELAINEGNLEEAAMLIESGLALEDSEDLKTLAAYTLARIYDQLHRFKKAAET HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YTFLLNLSPSYEMHYIAQLNTGIALREQSRARLAIKIFQDLLADDNNLENFGEIRFELAT EEEEEECCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AYAQNDELGKAFDLYQEIIYRHPGTEAAAKSFYQLGKLRMEISQDLTMAKTLFDSAKAAY HHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PKGDIAKKAQEQSTTLKNLLDLYDETIQLDSTIQLGILATADVLAEDTALPNDSLESEPA CCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCC PKKEEPPRKRTRQDYRKSAFLARGAHDAFNETTTQKSSTSTKPKFQPAANEAALKQYQIQ CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH AIENRIALGRFYHLTMQTPDSALSWYTQALRKIQADSSDKLATLREVVLFSLSDIYRNLG HHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC DTTQMDSVYKVLLADFPESAYINRVREHFNLPKLRRGENAPEQILYTNAIQTLENSQADT CCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHCCCHHH SLAMLKTLLSRYPNSALIPKVLLGIGFIYENNLSEPDSAILAYQKLAADYPKSEEAKHVK HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH NKLDAVQSRAKLIPTTPDDKIELPEKPPTPAPEMNRLERFPIKKDSTKANGVQPELQKMI HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHH KFAGNRADSVQHNPEKQNLE HHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA