Definition Chloroherpeton thalassium ATCC 35110 chromosome, complete genome.
Accession NC_011026
Length 3,293,456

Click here to switch to the map view.

The map label for this gene is 193213886

Identifier: 193213886

GI number: 193213886

Start: 196592

End: 197023

Strand: Direct

Name: 193213886

Synonym: Ctha_0167

Alternate gene names: NA

Gene position: 196592-197023 (Clockwise)

Preceding gene: 193213878

Following gene: 193213891

Centisome position: 5.97

GC content: 43.06

Gene sequence:

>432_bases
ATGACCGGGAAAATTGCTAAACGCAACGAAAAAATCCTCCAAAACATCGAACTTGATAATTTCGATTTTCTCGAGATTCC
TGAGCTTTATATCCACTCTGGAGAGCTAAACAAAAACGAGATAGAATACATCCGTGCCCGACTGGAGGAAATGCAGCGCG
TTCGTGAAAACTGCGAGCCCGAATCCTTACTGCGCATGAGGCAAGCCAATGAGCGCGCGATTTTGAACTTTTTGGGCGAA
ATGCGCTACCGTAGGCTGCAACTGCGCATGCAAATGTACTTGAAAGAATATTGCGAAAAGTTTATTGAAAGCTACGATAA
AGATATTGTTAAGCCGGAAAAAGAGCCGTTAGGTTCTGTTGCCCAGAAGTTTCATCTTGCGCTCAAAGATCTTTGGCAAA
AAGTATGCACGCTATTTAGCCCTTATCATTAA

Upstream 100 bases:

>100_bases
GAAAACGGGATAAAACTATTTTGAGTTATTAAGGAAGTTTGTAAATTCAATTTTTATTTTTAGTTATCGTCCCAACCAAA
TCTTAAGAAGGAGGTTTGTG

Downstream 100 bases:

>100_bases
TTCCCAAGTATCCTGACATCCTGAGATAAACACAACCTTGTTCTTTTTCCCCTAACCAGAAGCCGTTAGGCAATCTTATT
GACGGGGAGAGCTCAGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MTGKIAKRNEKILQNIELDNFDFLEIPELYIHSGELNKNEIEYIRARLEEMQRVRENCEPESLLRMRQANERAILNFLGE
MRYRRLQLRMQMYLKEYCEKFIESYDKDIVKPEKEPLGSVAQKFHLALKDLWQKVCTLFSPYH

Sequences:

>Translated_143_residues
MTGKIAKRNEKILQNIELDNFDFLEIPELYIHSGELNKNEIEYIRARLEEMQRVRENCEPESLLRMRQANERAILNFLGE
MRYRRLQLRMQMYLKEYCEKFIESYDKDIVKPEKEPLGSVAQKFHLALKDLWQKVCTLFSPYH
>Mature_142_residues
TGKIAKRNEKILQNIELDNFDFLEIPELYIHSGELNKNEIEYIRARLEEMQRVRENCEPESLLRMRQANERAILNFLGEM
RYRRLQLRMQMYLKEYCEKFIESYDKDIVKPEKEPLGSVAQKFHLALKDLWQKVCTLFSPYH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17331; Mature: 17200

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGKIAKRNEKILQNIELDNFDFLEIPELYIHSGELNKNEIEYIRARLEEMQRVRENCEP
CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCH
ESLLRMRQANERAILNFLGEMRYRRLQLRMQMYLKEYCEKFIESYDKDIVKPEKEPLGSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
AQKFHLALKDLWQKVCTLFSPYH
HHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TGKIAKRNEKILQNIELDNFDFLEIPELYIHSGELNKNEIEYIRARLEEMQRVRENCEP
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCH
ESLLRMRQANERAILNFLGEMRYRRLQLRMQMYLKEYCEKFIESYDKDIVKPEKEPLGSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
AQKFHLALKDLWQKVCTLFSPYH
HHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA