| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193213886
Identifier: 193213886
GI number: 193213886
Start: 196592
End: 197023
Strand: Direct
Name: 193213886
Synonym: Ctha_0167
Alternate gene names: NA
Gene position: 196592-197023 (Clockwise)
Preceding gene: 193213878
Following gene: 193213891
Centisome position: 5.97
GC content: 43.06
Gene sequence:
>432_bases ATGACCGGGAAAATTGCTAAACGCAACGAAAAAATCCTCCAAAACATCGAACTTGATAATTTCGATTTTCTCGAGATTCC TGAGCTTTATATCCACTCTGGAGAGCTAAACAAAAACGAGATAGAATACATCCGTGCCCGACTGGAGGAAATGCAGCGCG TTCGTGAAAACTGCGAGCCCGAATCCTTACTGCGCATGAGGCAAGCCAATGAGCGCGCGATTTTGAACTTTTTGGGCGAA ATGCGCTACCGTAGGCTGCAACTGCGCATGCAAATGTACTTGAAAGAATATTGCGAAAAGTTTATTGAAAGCTACGATAA AGATATTGTTAAGCCGGAAAAAGAGCCGTTAGGTTCTGTTGCCCAGAAGTTTCATCTTGCGCTCAAAGATCTTTGGCAAA AAGTATGCACGCTATTTAGCCCTTATCATTAA
Upstream 100 bases:
>100_bases GAAAACGGGATAAAACTATTTTGAGTTATTAAGGAAGTTTGTAAATTCAATTTTTATTTTTAGTTATCGTCCCAACCAAA TCTTAAGAAGGAGGTTTGTG
Downstream 100 bases:
>100_bases TTCCCAAGTATCCTGACATCCTGAGATAAACACAACCTTGTTCTTTTTCCCCTAACCAGAAGCCGTTAGGCAATCTTATT GACGGGGAGAGCTCAGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MTGKIAKRNEKILQNIELDNFDFLEIPELYIHSGELNKNEIEYIRARLEEMQRVRENCEPESLLRMRQANERAILNFLGE MRYRRLQLRMQMYLKEYCEKFIESYDKDIVKPEKEPLGSVAQKFHLALKDLWQKVCTLFSPYH
Sequences:
>Translated_143_residues MTGKIAKRNEKILQNIELDNFDFLEIPELYIHSGELNKNEIEYIRARLEEMQRVRENCEPESLLRMRQANERAILNFLGE MRYRRLQLRMQMYLKEYCEKFIESYDKDIVKPEKEPLGSVAQKFHLALKDLWQKVCTLFSPYH >Mature_142_residues TGKIAKRNEKILQNIELDNFDFLEIPELYIHSGELNKNEIEYIRARLEEMQRVRENCEPESLLRMRQANERAILNFLGEM RYRRLQLRMQMYLKEYCEKFIESYDKDIVKPEKEPLGSVAQKFHLALKDLWQKVCTLFSPYH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17331; Mature: 17200
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGKIAKRNEKILQNIELDNFDFLEIPELYIHSGELNKNEIEYIRARLEEMQRVRENCEP CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCH ESLLRMRQANERAILNFLGEMRYRRLQLRMQMYLKEYCEKFIESYDKDIVKPEKEPLGSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH AQKFHLALKDLWQKVCTLFSPYH HHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TGKIAKRNEKILQNIELDNFDFLEIPELYIHSGELNKNEIEYIRARLEEMQRVRENCEP CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCH ESLLRMRQANERAILNFLGEMRYRRLQLRMQMYLKEYCEKFIESYDKDIVKPEKEPLGSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH AQKFHLALKDLWQKVCTLFSPYH HHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA