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The map label for this gene is rsmI [H]

Identifier: 193213752

GI number: 193213752

Start: 44426

End: 45169

Strand: Direct

Name: rsmI [H]

Synonym: Ctha_0032

Alternate gene names: 193213752

Gene position: 44426-45169 (Clockwise)

Preceding gene: 193213751

Following gene: 193213753

Centisome position: 1.35

GC content: 47.72

Gene sequence:

>744_bases
TTGACAAGTTCAACAACAACGACACTCGAACCTGCACTTTATATTGTGGCTACGCCTATCGGCAATTTGGAAGACATGAC
GTTTCGCGCAGTGACAACCTTGCGAGCCGCCGACTGCATCGCTTGCGAAGACACGCGCCAAACGCGCAAATTGCTCCAAC
ATTTTGCCATCGATTCGAAAACACTTCTCAGCTACCATAATTTCAACGAACGCACGGCTTCCGCCAAAATTCTGGAATTT
TTGCAATCGGGAAAAAGCGTGGCGCTCGTGAGCGATGCCGGCACGCCCGTTATTTCCGACCCGGGATTTTTTTTGGTTCG
CGCAGCTCGCGACGCAGGGTTTCGGGTTGTTCCCATTCCAGGCGCAAGTGCGCTGGCAGCGGCAGTTTCGGTTTCGCCTT
TGCCGGTAAATCGTTTTTATTTTGAAGGATTTTTGCCCCAAAAAAAAGGCCGCCAAACGCGCTTGCAATATCTTGCGGAA
CTTGAATCGAGTGTTGTGCTCTACGAATCGCCTCATCGTATCTTGAAATTGTTGGATGAACTTTCAGCTCATTTTGGCGA
TCGGCAAATCATGCTTGCACGCGAGATGACAAAAATCTACGAGGAGTTTCTTTTGGGAACGATTGCTGAGGCGAAAGCAA
ATTTGCAGGAAAGGAAAATTCAAGGCGAGTTTGTCGTGATTGTTGAAGGAAAAAACGCGAAATCCAAAAACGAGACGTAC
GAAAACCAAGATGAAAATTATTGA

Upstream 100 bases:

>100_bases
GAACTCAAAAGCTGATTTGCTCTGTCCTGTTTTGCGTCGTAACTTGCATTTTTATAGCAAGTCCATTGCATTTTCAAATT
GCGATTAATTGATTTTTCCA

Downstream 100 bases:

>100_bases
GACGGTTTCTGAAATGCAGCACTTTTCCGAGTCGCTTCGGATTGCAGAAAAACGGCTTGGCGTGGTGCCAACCATGGGCG
CTTTGCACGACGGTCATTTA

Product: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MTSSTTTTLEPALYIVATPIGNLEDMTFRAVTTLRAADCIACEDTRQTRKLLQHFAIDSKTLLSYHNFNERTASAKILEF
LQSGKSVALVSDAGTPVISDPGFFLVRAARDAGFRVVPIPGASALAAAVSVSPLPVNRFYFEGFLPQKKGRQTRLQYLAE
LESSVVLYESPHRILKLLDELSAHFGDRQIMLAREMTKIYEEFLLGTIAEAKANLQERKIQGEFVVIVEGKNAKSKNETY
ENQDENY

Sequences:

>Translated_247_residues
MTSSTTTTLEPALYIVATPIGNLEDMTFRAVTTLRAADCIACEDTRQTRKLLQHFAIDSKTLLSYHNFNERTASAKILEF
LQSGKSVALVSDAGTPVISDPGFFLVRAARDAGFRVVPIPGASALAAAVSVSPLPVNRFYFEGFLPQKKGRQTRLQYLAE
LESSVVLYESPHRILKLLDELSAHFGDRQIMLAREMTKIYEEFLLGTIAEAKANLQERKIQGEFVVIVEGKNAKSKNETY
ENQDENY
>Mature_246_residues
TSSTTTTLEPALYIVATPIGNLEDMTFRAVTTLRAADCIACEDTRQTRKLLQHFAIDSKTLLSYHNFNERTASAKILEFL
QSGKSVALVSDAGTPVISDPGFFLVRAARDAGFRVVPIPGASALAAAVSVSPLPVNRFYFEGFLPQKKGRQTRLQYLAEL
ESSVVLYESPHRILKLLDELSAHFGDRQIMLAREMTKIYEEFLLGTIAEAKANLQERKIQGEFVVIVEGKNAKSKNETYE
NQDENY

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=229, Percent_Identity=47.1615720524017, Blast_Score=205, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 27484; Mature: 27352

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSTTTTLEPALYIVATPIGNLEDMTFRAVTTLRAADCIACEDTRQTRKLLQHFAIDSK
CCCCCCCEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCCH
TLLSYHNFNERTASAKILEFLQSGKSVALVSDAGTPVISDPGFFLVRAARDAGFRVVPIP
HHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEECCCCEEEEEEECCCCEEEEECC
GASALAAAVSVSPLPVNRFYFEGFLPQKKGRQTRLQYLAELESSVVLYESPHRILKLLDE
CHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEEECHHHHHHHHHH
LSAHFGDRQIMLAREMTKIYEEFLLGTIAEAKANLQERKIQGEFVVIVEGKNAKSKNETY
HHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
ENQDENY
CCCCCCC
>Mature Secondary Structure 
TSSTTTTLEPALYIVATPIGNLEDMTFRAVTTLRAADCIACEDTRQTRKLLQHFAIDSK
CCCCCCEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCCH
TLLSYHNFNERTASAKILEFLQSGKSVALVSDAGTPVISDPGFFLVRAARDAGFRVVPIP
HHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEECCCCEEEEEEECCCCEEEEECC
GASALAAAVSVSPLPVNRFYFEGFLPQKKGRQTRLQYLAELESSVVLYESPHRILKLLDE
CHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEEECHHHHHHHHHH
LSAHFGDRQIMLAREMTKIYEEFLLGTIAEAKANLQERKIQGEFVVIVEGKNAKSKNETY
HHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
ENQDENY
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]