Click here to switch to the map view.

The map label for this gene is 193213199

Identifier: 193213199

GI number: 193213199

Start: 1700267

End: 1702207

Strand: Direct

Name: 193213199

Synonym: Cpar_1554

Alternate gene names: NA

Gene position: 1700267-1702207 (Clockwise)

Preceding gene: 193213198

Following gene: 193213201

Centisome position: 74.27

GC content: 52.09

Gene sequence:

>1941_bases
ATGATAAAACTGGTCAAAACTGGCATTCTTGTCAACGCGATAGCACTCACGCTCGCAATGCCATCCGTCCTGAATGCCGC
CCCGACAAAAGCCATTATCAATGGAAGCGGCAATATCGTTACGGACGGAGATGTCAATGTGTATCATGGCGCAAGCAAAC
AGCAGCATGGGGAAGTCATGCGGGAGATTCGCAAACTCAAGCAGCTTGCGCTTCAGCAAAACACAAAAGCAGCAAAAAGC
AATCCGGCCTTTTTACGGATTGTTCAGAACATCTACAAAAAGCCGTATGAAGCGCTGACCGAACGGGAGCACATCACACT
TTGGGATAATGTTCAGAAAGCTCTCGAACGCGCTGAAAAAGCTGAACGGGATTTTGAGCTGGTCAAACAAGAAACAGCCA
GCGCTCAGTTGAAATCACTATTTCCAAAAATCGAAGCCGCGCGGGACAACTTCGACTACGACCAGGTCAACCGCCTGCTG
GCAGAGTTCCGCAACAAGCACGCGGAGTTGCGCCAGGACCTCGCCAGAGTGGACTACCTGCAAGGCCAGAACTACGAACT
GCAAATCAACTACCCGGAAGCCGAACGCTACTACAAAAAAGCCGCCGCCACCGAGGACGAAAACCCGCTCTATCTCGATG
CCCATGCAACCATACTCTGGAAAATGGGGCGATACGACGAAGCCGAGCCGCTCTTTCGACGCGCTCTCGCTATCGACAAA
AAAGCCCTCGGCCCCAATCATCCGAACGTAGCAATTCGCCTGAACAATCTGGCGAATTTGCTGGCCGATCAGGGCAACTA
CCGCGACGCTGAACCGCTCTACCGACGCGCTCTCGCTATCAGGGAGAAATCACTCGGCCCCAATCACCCGGACGTTGCCA
ACACACTCAACAATCTGGCGGTTTTACTAGGCAATAAAAGCAGATACGATGAAGCCGAACCGCTTTACCGACGCGCTCTC
GCTATCAGGGAGAAATCACTCGGCCCCAATCATCCTGGTGTTGCCACCACACTCAACAATCTGGCGGCTTTACTAGACAA
TAAAAGCAGATACGATGAAGCCGAACCGCTTTACCGACGCGCTCTCGCTATCAGGGAGAAATCACTCGGCCCCAATCACC
CGGACGTTGCCAACACACTCAACAATCTGGCGGTTTTACTAGACAATAAAAGCAGATACGATGAAGCCGAACCGCTTTAC
CGACGCGCCATCGCTATCGACGAAAAAGCGCTCGGCCCCAATCACCCGGACGTTGCCAACACACTCAACAATCTGGCGGT
TTTACTAGGCAATAAAAGCAGATACGATGAAGCCGAACCGCTTTACCGACGCGCCATCGCTATCGACGAAAAAGCGCTCG
GCCCCAATCATCCTGGTGTTGCCACCACACTCAACAATCTGGCGGTTTTACTAGGCAATAAAAGCAGATACGATGAAGCC
GAACCGCTTTACCGACGCGCTCTCGCTATCAGGGAGAAATCACTCGGCCCCAATCACCCGGACGTTGCCAACACACTCCA
CAATCTGGCGGCTTTACTAGACAATAAAAGCAGATACGATGAAGCCGAACCGCTTTACCGACGCGCTCTCGCTATCAGGG
AGAAATCACTCGGCCCCAATCATCCTGGTGTTGCCACCACACTCAACAATCTGGCGGTTTTACTAGGCAATAAAAGCAGA
TACGATGAAGCCGAACCGCTTTACCGACGCGCTCTCGCTATCAGGGAGAAATCACTCGGCCCCAATCACCCGGACGTTGC
CAACACACTCAACAATCTGGCGGTTTTACTAGGCAATAAAAGCAGATACGATGAAGCCGAACCGCTTTACCGACGCGCCA
TCGCTATCGACGAAAAAGCGCTCGGCCCCAATCATCCGAAAACAATACTGCACAGAAACAACCTCAACGCTTTGCTTGAA
CAGAAAAAAACCGCGAAGTAA

Upstream 100 bases:

>100_bases
CATCTCAGTCCGTTCAAGGAAACAGTGGCGATGTCACCATCATCAACGGTGATAACAACATCAAGGCTGGCGGCGACGTA
ACGATTCAGGGGGAAAAAGA

Downstream 100 bases:

>100_bases
CCCTCGCGCTCATCCCCCCACGTGCAGCCTCACCCACGTAGCAAACCGATCCATCCACCCCTGCAGAAAATCGCGGCTGC
CGGGGCCGATGCCGCCGTCG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Family; Serine/Threonine Protein Kinase; Tetratricopeptide Repeat Family Protein; Kinesin Light Chain; NB-ARC Domain-Containing Protein; NB-ARC Domain Protein; Tetratricopeptide Domain-Containing Protein; Serine/Threonine Kinase Family Protein; Tetratricopeptide Repeat-Containing Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; TPR Repeat-Containing Serine/Threonin Protein Kinase; Nb-Arc; TPR Domain Family Protein; Serine/Threonine-Protein Kinase; SEC-C Motif Domain Protein; Tetratricopeptide TPR2 Protein; TIR Protein; Serine/Threonine Protein Kinase With TPR Repeats; Ankyrin Repeat Domain Protein; Tetratricopeptide Tpr_3 Repeat-Containing Protein; Tetratricopeptide Repeat Protein; Kinesin Light Chain-Related Protein; Protein Kinase; Tetratricopeptide TPR4 Domain-Containing Protein; Sel1 Domain-Containing Protein; Ankyrin And Tpr Repeat Domain Protein; Peptidase-Like

Number of amino acids: Translated: 646; Mature: 646

Protein sequence:

>646_residues
MIKLVKTGILVNAIALTLAMPSVLNAAPTKAIINGSGNIVTDGDVNVYHGASKQQHGEVMREIRKLKQLALQQNTKAAKS
NPAFLRIVQNIYKKPYEALTEREHITLWDNVQKALERAEKAERDFELVKQETASAQLKSLFPKIEAARDNFDYDQVNRLL
AEFRNKHAELRQDLARVDYLQGQNYELQINYPEAERYYKKAAATEDENPLYLDAHATILWKMGRYDEAEPLFRRALAIDK
KALGPNHPNVAIRLNNLANLLADQGNYRDAEPLYRRALAIREKSLGPNHPDVANTLNNLAVLLGNKSRYDEAEPLYRRAL
AIREKSLGPNHPGVATTLNNLAALLDNKSRYDEAEPLYRRALAIREKSLGPNHPDVANTLNNLAVLLDNKSRYDEAEPLY
RRAIAIDEKALGPNHPDVANTLNNLAVLLGNKSRYDEAEPLYRRAIAIDEKALGPNHPGVATTLNNLAVLLGNKSRYDEA
EPLYRRALAIREKSLGPNHPDVANTLHNLAALLDNKSRYDEAEPLYRRALAIREKSLGPNHPGVATTLNNLAVLLGNKSR
YDEAEPLYRRALAIREKSLGPNHPDVANTLNNLAVLLGNKSRYDEAEPLYRRAIAIDEKALGPNHPKTILHRNNLNALLE
QKKTAK

Sequences:

>Translated_646_residues
MIKLVKTGILVNAIALTLAMPSVLNAAPTKAIINGSGNIVTDGDVNVYHGASKQQHGEVMREIRKLKQLALQQNTKAAKS
NPAFLRIVQNIYKKPYEALTEREHITLWDNVQKALERAEKAERDFELVKQETASAQLKSLFPKIEAARDNFDYDQVNRLL
AEFRNKHAELRQDLARVDYLQGQNYELQINYPEAERYYKKAAATEDENPLYLDAHATILWKMGRYDEAEPLFRRALAIDK
KALGPNHPNVAIRLNNLANLLADQGNYRDAEPLYRRALAIREKSLGPNHPDVANTLNNLAVLLGNKSRYDEAEPLYRRAL
AIREKSLGPNHPGVATTLNNLAALLDNKSRYDEAEPLYRRALAIREKSLGPNHPDVANTLNNLAVLLDNKSRYDEAEPLY
RRAIAIDEKALGPNHPDVANTLNNLAVLLGNKSRYDEAEPLYRRAIAIDEKALGPNHPGVATTLNNLAVLLGNKSRYDEA
EPLYRRALAIREKSLGPNHPDVANTLHNLAALLDNKSRYDEAEPLYRRALAIREKSLGPNHPGVATTLNNLAVLLGNKSR
YDEAEPLYRRALAIREKSLGPNHPDVANTLNNLAVLLGNKSRYDEAEPLYRRAIAIDEKALGPNHPKTILHRNNLNALLE
QKKTAK
>Mature_646_residues
MIKLVKTGILVNAIALTLAMPSVLNAAPTKAIINGSGNIVTDGDVNVYHGASKQQHGEVMREIRKLKQLALQQNTKAAKS
NPAFLRIVQNIYKKPYEALTEREHITLWDNVQKALERAEKAERDFELVKQETASAQLKSLFPKIEAARDNFDYDQVNRLL
AEFRNKHAELRQDLARVDYLQGQNYELQINYPEAERYYKKAAATEDENPLYLDAHATILWKMGRYDEAEPLFRRALAIDK
KALGPNHPNVAIRLNNLANLLADQGNYRDAEPLYRRALAIREKSLGPNHPDVANTLNNLAVLLGNKSRYDEAEPLYRRAL
AIREKSLGPNHPGVATTLNNLAALLDNKSRYDEAEPLYRRALAIREKSLGPNHPDVANTLNNLAVLLDNKSRYDEAEPLY
RRAIAIDEKALGPNHPDVANTLNNLAVLLGNKSRYDEAEPLYRRAIAIDEKALGPNHPGVATTLNNLAVLLGNKSRYDEA
EPLYRRALAIREKSLGPNHPDVANTLHNLAALLDNKSRYDEAEPLYRRALAIREKSLGPNHPGVATTLNNLAVLLGNKSR
YDEAEPLYRRALAIREKSLGPNHPDVANTLNNLAVLLGNKSRYDEAEPLYRRAIAIDEKALGPNHPKTILHRNNLNALLE
QKKTAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI34304360, Length=355, Percent_Identity=40.5633802816901, Blast_Score=248, Evalue=1e-65,
Organism=Homo sapiens, GI41871960, Length=297, Percent_Identity=42.0875420875421, Blast_Score=196, Evalue=8e-50,
Organism=Homo sapiens, GI41871955, Length=297, Percent_Identity=42.0875420875421, Blast_Score=196, Evalue=8e-50,
Organism=Homo sapiens, GI41871946, Length=297, Percent_Identity=42.0875420875421, Blast_Score=196, Evalue=8e-50,
Organism=Homo sapiens, GI33620730, Length=311, Percent_Identity=39.871382636656, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI110735431, Length=311, Percent_Identity=39.871382636656, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI194306559, Length=311, Percent_Identity=39.871382636656, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI198041734, Length=299, Percent_Identity=40.4682274247492, Blast_Score=180, Evalue=5e-45,
Organism=Homo sapiens, GI198041731, Length=299, Percent_Identity=40.4682274247492, Blast_Score=180, Evalue=5e-45,
Organism=Homo sapiens, GI12383062, Length=299, Percent_Identity=40.4682274247492, Blast_Score=180, Evalue=5e-45,
Organism=Homo sapiens, GI198041728, Length=299, Percent_Identity=40.4682274247492, Blast_Score=179, Evalue=7e-45,
Organism=Homo sapiens, GI91825557, Length=197, Percent_Identity=50.253807106599, Blast_Score=178, Evalue=2e-44,
Organism=Homo sapiens, GI18104962, Length=395, Percent_Identity=26.0759493670886, Blast_Score=103, Evalue=7e-22,
Organism=Homo sapiens, GI32307150, Length=388, Percent_Identity=28.3505154639175, Blast_Score=93, Evalue=1e-18,
Organism=Homo sapiens, GI32307148, Length=388, Percent_Identity=28.3505154639175, Blast_Score=93, Evalue=1e-18,
Organism=Homo sapiens, GI301336134, Length=278, Percent_Identity=30.9352517985612, Blast_Score=86, Evalue=2e-16,
Organism=Homo sapiens, GI83415184, Length=278, Percent_Identity=30.9352517985612, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI19923891, Length=125, Percent_Identity=38.4, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI22749211, Length=404, Percent_Identity=25.4950495049505, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI22547159, Length=209, Percent_Identity=28.2296650717703, Blast_Score=67, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71984535, Length=298, Percent_Identity=40.2684563758389, Blast_Score=195, Evalue=6e-50,
Organism=Caenorhabditis elegans, GI71984517, Length=289, Percent_Identity=40.8304498269896, Blast_Score=193, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI71984527, Length=289, Percent_Identity=40.8304498269896, Blast_Score=193, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI71984524, Length=279, Percent_Identity=41.5770609318996, Blast_Score=192, Evalue=4e-49,
Organism=Caenorhabditis elegans, GI17541458, Length=209, Percent_Identity=39.2344497607655, Blast_Score=145, Evalue=5e-35,
Organism=Caenorhabditis elegans, GI115532690, Length=362, Percent_Identity=25.9668508287293, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI115532692, Length=362, Percent_Identity=25.9668508287293, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI17647555, Length=462, Percent_Identity=35.0649350649351, Blast_Score=197, Evalue=2e-50,
Organism=Drosophila melanogaster, GI17647755, Length=446, Percent_Identity=26.9058295964126, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24585827, Length=446, Percent_Identity=26.9058295964126, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24585829, Length=446, Percent_Identity=26.9058295964126, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI161076610, Length=382, Percent_Identity=28.0104712041885, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI19920486, Length=382, Percent_Identity=28.0104712041885, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24656717, Length=421, Percent_Identity=25.8907363420428, Blast_Score=68, Evalue=3e-11,
Organism=Drosophila melanogaster, GI18110006, Length=421, Percent_Identity=25.8907363420428, Blast_Score=68, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72432; Mature: 72432

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLVKTGILVNAIALTLAMPSVLNAAPTKAIINGSGNIVTDGDVNVYHGASKQQHGEVM
CCEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEECCCCEEEECCCHHHHHHHH
REIRKLKQLALQQNTKAAKSNPAFLRIVQNIYKKPYEALTEREHITLWDNVQKALERAEK
HHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHCHHHHHHCCCCEEHHHHHHHHHHHHHH
AERDFELVKQETASAQLKSLFPKIEAARDNFDYDQVNRLLAEFRNKHAELRQDLARVDYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGQNYELQINYPEAERYYKKAAATEDENPLYLDAHATILWKMGRYDEAEPLFRRALAIDK
CCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHH
KALGPNHPNVAIRLNNLANLLADQGNYRDAEPLYRRALAIREKSLGPNHPDVANTLNNLA
HHCCCCCCCEEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHE
VLLGNKSRYDEAEPLYRRALAIREKSLGPNHPGVATTLNNLAALLDNKSRYDEAEPLYRR
EEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
ALAIREKSLGPNHPDVANTLNNLAVLLDNKSRYDEAEPLYRRAIAIDEKALGPNHPDVAN
HHHHHHHCCCCCCCHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHCHHCCCCCCCHHHH
TLNNLAVLLGNKSRYDEAEPLYRRAIAIDEKALGPNHPGVATTLNNLAVLLGNKSRYDEA
HHHHHEEEECCCCCCCCHHHHHHHHHHHCHHCCCCCCCCHHHHHHCEEEEECCCCCCCCH
EPLYRRALAIREKSLGPNHPDVANTLHNLAALLDNKSRYDEAEPLYRRALAIREKSLGPN
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC
HPGVATTLNNLAVLLGNKSRYDEAEPLYRRALAIREKSLGPNHPDVANTLNNLAVLLGNK
CCCHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEECCC
SRYDEAEPLYRRAIAIDEKALGPNHPKTILHRNNLNALLEQKKTAK
CCCCCHHHHHHHHHHHCHHCCCCCCCHHEEECCCHHHHHHHHHCCC
>Mature Secondary Structure
MIKLVKTGILVNAIALTLAMPSVLNAAPTKAIINGSGNIVTDGDVNVYHGASKQQHGEVM
CCEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEECCCCEEEECCCHHHHHHHH
REIRKLKQLALQQNTKAAKSNPAFLRIVQNIYKKPYEALTEREHITLWDNVQKALERAEK
HHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHCHHHHHHCCCCEEHHHHHHHHHHHHHH
AERDFELVKQETASAQLKSLFPKIEAARDNFDYDQVNRLLAEFRNKHAELRQDLARVDYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGQNYELQINYPEAERYYKKAAATEDENPLYLDAHATILWKMGRYDEAEPLFRRALAIDK
CCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHH
KALGPNHPNVAIRLNNLANLLADQGNYRDAEPLYRRALAIREKSLGPNHPDVANTLNNLA
HHCCCCCCCEEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHE
VLLGNKSRYDEAEPLYRRALAIREKSLGPNHPGVATTLNNLAALLDNKSRYDEAEPLYRR
EEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
ALAIREKSLGPNHPDVANTLNNLAVLLDNKSRYDEAEPLYRRAIAIDEKALGPNHPDVAN
HHHHHHHCCCCCCCHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHCHHCCCCCCCHHHH
TLNNLAVLLGNKSRYDEAEPLYRRAIAIDEKALGPNHPGVATTLNNLAVLLGNKSRYDEA
HHHHHEEEECCCCCCCCHHHHHHHHHHHCHHCCCCCCCCHHHHHHCEEEEECCCCCCCCH
EPLYRRALAIREKSLGPNHPDVANTLHNLAALLDNKSRYDEAEPLYRRALAIREKSLGPN
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC
HPGVATTLNNLAVLLGNKSRYDEAEPLYRRALAIREKSLGPNHPDVANTLNNLAVLLGNK
CCCHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEECCC
SRYDEAEPLYRRAIAIDEKALGPNHPKTILHRNNLNALLEQKKTAK
CCCCCHHHHHHHHHHHCHHCCCCCCCHHEEECCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA