| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193213201
Identifier: 193213201
GI number: 193213201
Start: 1702945
End: 1704531
Strand: Direct
Name: 193213201
Synonym: Cpar_1556
Alternate gene names: NA
Gene position: 1702945-1704531 (Clockwise)
Preceding gene: 193213199
Following gene: 193213202
Centisome position: 74.39
GC content: 57.15
Gene sequence:
>1587_bases ATGAAAAAAGCCCTCCTCATCACCGGTTTCGTCCTCGCCCTTCTCACAGGGCTCGGCTTCTGGCTGTACCACAGCTTCAC TATCCTCAAGACCAAGCCTCCCGTTCCCCTGACCACTGAGGTTGAGCTCGAACAGCCGTCATCGCTGTTCAACGTGCCAA TCAGCATCGAACACGCGGTGCTGGCCAACTACCTGAACGGCAAGATTCGCGGCAACTTCCTGAACGCCGACCTGTGGCTG CAGAAAAAGCACAAAGAGCAGATCAGCCTCGCCCTGACCAGAGATGAGAACATCACCATCAGTTCGAACGGCCAGAGGCT GATCTGCACCTTTCCGGTCTCGGCGGAAGCGCGGCTCACCGACAGTCGCTTCGGCAAGTTTCTCGCCAAACTGCTGGTGG GGCCGGTGCGCGCCAAAGCGGTCGTCACCTTCTCGACGCCGATCGCACTCGACCGGCGCTGGCATCTCCGGACGCACTTC AAAATCGTGGAGGTCAAGTGGGAAAAGGAGCCGGTGGTAAAAATCGGGCCTTTCCGCAAGCACATCCGGGCAGACCTCGA CACCCTGCTCAGCGACAACAAGCGCGGCCTGACCGCCTTGCTCGATACCGAAATCAACAAAGCGGCAAGCCTCTCGCCCA CCGTCAGAGGCGTCTGGAGAGATTTGCAGAAGCCGATCGTGCTCACCCGCAAGCCGCTTCCCGTCTGGTTGCGTTTCCAC TGCGAAGACATCAGCGGAAAAATCGCTCTGAACAGAAAAGCCATCGTCTGCAACACCCGGATCACGACAACCATGACAGT GCTGACCGACACGACAGCAATTCGACCACCAAACCGCCTGCCGCGCTTCCGCCAAACGCCCAAAGACAGCATCTCGACCA TCTCCGATGTCAACTTCTACGCCGTGGCGCCGTTCACCAGCATCAACCAGCAGCTCAATGACTTCTTCATGAACCGGAGT TTCCACCGGTCGGATTATGACGTCATCGTACGGAGCGTCAACGCCTATGGCTCTTCGAGAGGGCTCTCGGTGGCCATCAT GACCGACCACGACCTGAAAGGGCACGTCATCATGAGCGGGCAGCCACGCTATGACGTATCGACCCACACCATCGGCATCG ACCATTTCGACTACTCTATCGACACCGGCAACCCGATCATCAGCACCGGGGAACTCGTCATGCACGACGCCATCCGCGAC AGCATCGCCACAAGGCTGAACTTGCAGATCGGTTCGATCGTCGACCGCCTGCCGACAATCATCACCACTGCCGTCTCCAA AGCCAAAGCCGGCAGAACCATCGACCTGCGCATCGACAGCCTCGCCATTCGCAAATGCGATATCCGCGTCGGCAGGGATA ACGTCTATCTTTTGGTCAACGCTACCGCGAAAAACACCATCCGCATCAAGCGGATCAAATCTGGCAAAGCCATAAGAATC CATAAAAAAGCAAGAAAAAAGCGTCGGGACTCTGCCAACAGGCAAAGCGGTAACTATCGAAGCAGTATGAGCCAACCCTG CAAATCACCCATCAGCCACGGGCAAGCCGCTTGTCAGTGCGTCCTCTCCCCTATTTTCCGTTGTTAA
Upstream 100 bases:
>100_bases AACGGCTATTTTGAAGCCGCAGCGGGAATCGGTATACTATTTCAAGAGTACTTCAGGAGTTATCCAGGTATTGCCGATAT CCATCCGGAAAACAGGCAAG
Downstream 100 bases:
>100_bases TTTCCCGGAGAAAAACCTTACTTTTTTATTATAAGGCGCACCGGTAATAGCGCCGATAAGTACAAGACCGTACCTGCTAT GCTCGGAGACGTTTTACTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MKKALLITGFVLALLTGLGFWLYHSFTILKTKPPVPLTTEVELEQPSSLFNVPISIEHAVLANYLNGKIRGNFLNADLWL QKKHKEQISLALTRDENITISSNGQRLICTFPVSAEARLTDSRFGKFLAKLLVGPVRAKAVVTFSTPIALDRRWHLRTHF KIVEVKWEKEPVVKIGPFRKHIRADLDTLLSDNKRGLTALLDTEINKAASLSPTVRGVWRDLQKPIVLTRKPLPVWLRFH CEDISGKIALNRKAIVCNTRITTTMTVLTDTTAIRPPNRLPRFRQTPKDSISTISDVNFYAVAPFTSINQQLNDFFMNRS FHRSDYDVIVRSVNAYGSSRGLSVAIMTDHDLKGHVIMSGQPRYDVSTHTIGIDHFDYSIDTGNPIISTGELVMHDAIRD SIATRLNLQIGSIVDRLPTIITTAVSKAKAGRTIDLRIDSLAIRKCDIRVGRDNVYLLVNATAKNTIRIKRIKSGKAIRI HKKARKKRRDSANRQSGNYRSSMSQPCKSPISHGQAACQCVLSPIFRC
Sequences:
>Translated_528_residues MKKALLITGFVLALLTGLGFWLYHSFTILKTKPPVPLTTEVELEQPSSLFNVPISIEHAVLANYLNGKIRGNFLNADLWL QKKHKEQISLALTRDENITISSNGQRLICTFPVSAEARLTDSRFGKFLAKLLVGPVRAKAVVTFSTPIALDRRWHLRTHF KIVEVKWEKEPVVKIGPFRKHIRADLDTLLSDNKRGLTALLDTEINKAASLSPTVRGVWRDLQKPIVLTRKPLPVWLRFH CEDISGKIALNRKAIVCNTRITTTMTVLTDTTAIRPPNRLPRFRQTPKDSISTISDVNFYAVAPFTSINQQLNDFFMNRS FHRSDYDVIVRSVNAYGSSRGLSVAIMTDHDLKGHVIMSGQPRYDVSTHTIGIDHFDYSIDTGNPIISTGELVMHDAIRD SIATRLNLQIGSIVDRLPTIITTAVSKAKAGRTIDLRIDSLAIRKCDIRVGRDNVYLLVNATAKNTIRIKRIKSGKAIRI HKKARKKRRDSANRQSGNYRSSMSQPCKSPISHGQAACQCVLSPIFRC >Mature_528_residues MKKALLITGFVLALLTGLGFWLYHSFTILKTKPPVPLTTEVELEQPSSLFNVPISIEHAVLANYLNGKIRGNFLNADLWL QKKHKEQISLALTRDENITISSNGQRLICTFPVSAEARLTDSRFGKFLAKLLVGPVRAKAVVTFSTPIALDRRWHLRTHF KIVEVKWEKEPVVKIGPFRKHIRADLDTLLSDNKRGLTALLDTEINKAASLSPTVRGVWRDLQKPIVLTRKPLPVWLRFH CEDISGKIALNRKAIVCNTRITTTMTVLTDTTAIRPPNRLPRFRQTPKDSISTISDVNFYAVAPFTSINQQLNDFFMNRS FHRSDYDVIVRSVNAYGSSRGLSVAIMTDHDLKGHVIMSGQPRYDVSTHTIGIDHFDYSIDTGNPIISTGELVMHDAIRD SIATRLNLQIGSIVDRLPTIITTAVSKAKAGRTIDLRIDSLAIRKCDIRVGRDNVYLLVNATAKNTIRIKRIKSGKAIRI HKKARKKRRDSANRQSGNYRSSMSQPCKSPISHGQAACQCVLSPIFRC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59300; Mature: 59300
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKALLITGFVLALLTGLGFWLYHSFTILKTKPPVPLTTEVELEQPSSLFNVPISIEHAV CCCEEEHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEECCCCCCCEECCEEEHHHH LANYLNGKIRGNFLNADLWLQKKHKEQISLALTRDENITISSNGQRLICTFPVSAEARLT HHHHHCCEEEEEEECCEEEEEHHCCCEEEEEEEECCEEEEECCCCEEEEEECCCCCCCCC DSRFGKFLAKLLVGPVRAKAVVTFSTPIALDRRWHLRTHFKIVEVKWEKEPVVKIGPFRK HHHHHHHHHHHHCCCCCEEEEEEEECCEEECCEEEEEEEEEEEEEEECCCCCEEECCHHH HIRADLDTLLSDNKRGLTALLDTEINKAASLSPTVRGVWRDLQKPIVLTRKPLPVWLRFH HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCEEEEEE CEDISGKIALNRKAIVCNTRITTTMTVLTDTTAIRPPNRLPRFRQTPKDSISTISDVNFY EECCCCEEEECCEEEEEECEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCEE AVAPFTSINQQLNDFFMNRSFHRSDYDVIVRSVNAYGSSRGLSVAIMTDHDLKGHVIMSG EECCHHHHHHHHHHHHHCCCCCCCCHHHHEEEHHCCCCCCCCEEEEEECCCCCCEEEECC QPRYDVSTHTIGIDHFDYSIDTGNPIISTGELVMHDAIRDSIATRLNLQIGSIVDRLPTI CCCCCCCEEEEEEECEEEEECCCCCEEECCHHHHHHHHHHHHHHEEEEEHHHHHHHHHHH ITTAVSKAKAGRTIDLRIDSLAIRKCDIRVGRDNVYLLVNATAKNTIRIKRIKSGKAIRI HHHHHHHHCCCCEEEEEEEEEEEEEEEEEECCCCEEEEEEECCCCEEEEEEECCCCEEEE HKKARKKRRDSANRQSGNYRSSMSQPCKSPISHGQAACQCVLSPIFRC EHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKALLITGFVLALLTGLGFWLYHSFTILKTKPPVPLTTEVELEQPSSLFNVPISIEHAV CCCEEEHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEECCCCCCCEECCEEEHHHH LANYLNGKIRGNFLNADLWLQKKHKEQISLALTRDENITISSNGQRLICTFPVSAEARLT HHHHHCCEEEEEEECCEEEEEHHCCCEEEEEEEECCEEEEECCCCEEEEEECCCCCCCCC DSRFGKFLAKLLVGPVRAKAVVTFSTPIALDRRWHLRTHFKIVEVKWEKEPVVKIGPFRK HHHHHHHHHHHHCCCCCEEEEEEEECCEEECCEEEEEEEEEEEEEEECCCCCEEECCHHH HIRADLDTLLSDNKRGLTALLDTEINKAASLSPTVRGVWRDLQKPIVLTRKPLPVWLRFH HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCEEEEEE CEDISGKIALNRKAIVCNTRITTTMTVLTDTTAIRPPNRLPRFRQTPKDSISTISDVNFY EECCCCEEEECCEEEEEECEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCEE AVAPFTSINQQLNDFFMNRSFHRSDYDVIVRSVNAYGSSRGLSVAIMTDHDLKGHVIMSG EECCHHHHHHHHHHHHHCCCCCCCCHHHHEEEHHCCCCCCCCEEEEEECCCCCCEEEECC QPRYDVSTHTIGIDHFDYSIDTGNPIISTGELVMHDAIRDSIATRLNLQIGSIVDRLPTI CCCCCCCEEEEEEECEEEEECCCCCEEECCHHHHHHHHHHHHHHEEEEEHHHHHHHHHHH ITTAVSKAKAGRTIDLRIDSLAIRKCDIRVGRDNVYLLVNATAKNTIRIKRIKSGKAIRI HHHHHHHHCCCCEEEEEEEEEEEEEEEEEECCCCEEEEEEECCCCEEEEEEECCCCEEEE HKKARKKRRDSANRQSGNYRSSMSQPCKSPISHGQAACQCVLSPIFRC EHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA