| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is glgP [H]
Identifier: 193213170
GI number: 193213170
Start: 1668544
End: 1670664
Strand: Direct
Name: glgP [H]
Synonym: Cpar_1525
Alternate gene names: 193213170
Gene position: 1668544-1670664 (Clockwise)
Preceding gene: 193213168
Following gene: 193213171
Centisome position: 72.89
GC content: 57.71
Gene sequence:
>2121_bases ATGTCAAAAAATATCTCCGCCGTTAAAAAGCTCTCAAGGAACCTGTGGTGGTCATGGGATACCGAAGCCAAAGAGCTGTT CAAAAATCTCTCGCCACTGCTGTGGGAGAAGGTCAATCACAACCCGGTGGAGCTGCTGCGGCACATCTCGGCAGAAGAGC TCGAAGCCCGCTGCTCGTGCGAGCTGGGCATCACCATCGACCAGGTCAGCAGGCGCTTTGAAGATTACCTTGCGGACAAG AACACCTGGGCGGCTAACCACGCGCCCCAACTGCTTTCCAGACCGGTGGCCTATTTCAGCGCCGAGTTCGGCATCCACGA AAGTGTCCGGATTTACTCTGGCGGCCTCGGCATTCTCTCCGGCGATCACATCAAATCGGCCAGCGATCTCGGCCTCAACT TCATCGGCGTCACCCTTTTTTACAAAGAGGGCTATTTCCGCCAGTACCTGAACCAGGATGGCTGGCAGAACGAAGATTAC CCGCTGCAATACCCTGAAAGCCTGCCGGTCGAGAAGGTGACCGATGAAGACGGCAAGGATCTGATCATCGAGCTGACCAT CGCGCAGAGCACCGTGTATGCGCAAGCCTGGAGCCTGAAGGTCGGACGCGCCACGCTCTACCTGCTCGACACAAACATTC CGGCCAACGAAGCGCACTACCGTGAAATCTGCTCGCGGGTCTATGGCGGCGACCAGAACATGCGCATCAATCAGGAGATT CTGCTCGGCATCGGCGGCGTCAAGCTGCTCAAGGCACTGAAGCTCGATCCTGCGGTCTATCACATGAACGAGGGGCACTC GGCCTTCCTGACGCTTGAACTGCTTGCCGAACAGCTCGGCAAGGGGCTCTCCTACCAGGAGGCGAAAGCCAAAGTCAAGG AGCAGTGCGTCTTCACCACGCACACTCCTGTGCCTGCCGGCCACGACCGCTTTTCGAGAGACATGATGAGCTACACCTTC TCGAAATACCTGGGTCAAATCGGCATCGATTTCGAAGACATGATGAAGCTCGGGGCAGAAAATCCGGCGGACACCTCGGG ACTGTTCACCATGACCGTGCTCGCCCTGCAACTCTCCCGCTGCGCCAATGGCGTCTCGAAGCTGCACGGCGAGGTTTCAC GTGAGATGTGGAAGCACCTCTACGGCACCGACGACCCCAACCAGGTGCCGATCGGCCACATCACCAACGGTGTGCACACC AGAAGCTGGAGCAGCGGTTTCACCGACCGGTTCTGGAAAAACCATGCCGAAAGCATTGAAGAGCTGTTCTCGTCGAGAGA GTCTGCGGAAACTGTTCTGGCTCGTGTTTCCGACAGCGAACTGTGGTGCATGCGCTACCGTCTGAAGCGCAATCTTATGG ACTACATTTCGCGCTACCTGTCCAACCAGCTCTATCACCAGCACCAGTACACGCCGTACAAACCGGCGGACTCATCGAGA TCGGCCAAAAGCATTCTGTCGCCCGACGTGCTGACCATCGGTTTCGCCCGGCGTTTCGCGACCTACAAGCGCGCTCCGCT CATCTTCCAGGATCTGGAGAGGCTGAACGCCATCGTCAACAATGCGAACATGCCGGTGCAGATCATCTTTGCCGGCAAAG CCCATCCGCACGACGATGCAGGCAAGGAGTACATCCGCCAGATCGTCGAACACTCGCGCCGCCCGCAGTTCCTCGGTAAA GTGATTTTCCTTGAGAACTACAATATCGGCGTGGCCAAGCGCCTCATTTCAGGCGTCGATGTCTGGCTGAACAACCCGGT CAGGCCGATGGAAGCCAGCGGCACCTCCGGCCAGAAAACCGTGCTGCACGGCGGCCTGAACCTGAGCATCATGGACGGCT GGTGGTGTGAGGCCTACAACGGCACCAACGGCTGGTCGATCGGCAGCGGAGAGGAGAACGACAATTACGACGAGCAGTAT CGCATCGATGCCGCCCACCTGTACGAAGTGCTCGAACACCAGGTCATTCCAACCTTCTACGAGCGCAACGAGCACAACAT TCCGGTCAGGTGGCTGAAAAACGTGCGCAACGCCATTGCCTCCATCGCTCCGGTCTATAACACCGACCGCATGGTCAAGG AGTACACCATGCGCTACTACCTCAATGACCAGCGTCCCTGA
Upstream 100 bases:
>100_bases GTTCACCCTTGCGCTCCCGCCTCGGGGAGGCATCCGGCAAGATACTCCATTTTCTTAATCTGCACCACCTGAGGCGAGCA GCAAAACCCTTAAATCCAAT
Downstream 100 bases:
>100_bases GCCATTAACAGAGTACCATGACCTCATCAGCTTCAACAGTTACCAACTCCCCTGCCGCCATCAATCTCGGCAGGGGTCTC GACCTCCGCTCGCCGGTCAT
Product: alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 706; Mature: 705
Protein sequence:
>706_residues MSKNISAVKKLSRNLWWSWDTEAKELFKNLSPLLWEKVNHNPVELLRHISAEELEARCSCELGITIDQVSRRFEDYLADK NTWAANHAPQLLSRPVAYFSAEFGIHESVRIYSGGLGILSGDHIKSASDLGLNFIGVTLFYKEGYFRQYLNQDGWQNEDY PLQYPESLPVEKVTDEDGKDLIIELTIAQSTVYAQAWSLKVGRATLYLLDTNIPANEAHYREICSRVYGGDQNMRINQEI LLGIGGVKLLKALKLDPAVYHMNEGHSAFLTLELLAEQLGKGLSYQEAKAKVKEQCVFTTHTPVPAGHDRFSRDMMSYTF SKYLGQIGIDFEDMMKLGAENPADTSGLFTMTVLALQLSRCANGVSKLHGEVSREMWKHLYGTDDPNQVPIGHITNGVHT RSWSSGFTDRFWKNHAESIEELFSSRESAETVLARVSDSELWCMRYRLKRNLMDYISRYLSNQLYHQHQYTPYKPADSSR SAKSILSPDVLTIGFARRFATYKRAPLIFQDLERLNAIVNNANMPVQIIFAGKAHPHDDAGKEYIRQIVEHSRRPQFLGK VIFLENYNIGVAKRLISGVDVWLNNPVRPMEASGTSGQKTVLHGGLNLSIMDGWWCEAYNGTNGWSIGSGEENDNYDEQY RIDAAHLYEVLEHQVIPTFYERNEHNIPVRWLKNVRNAIASIAPVYNTDRMVKEYTMRYYLNDQRP
Sequences:
>Translated_706_residues MSKNISAVKKLSRNLWWSWDTEAKELFKNLSPLLWEKVNHNPVELLRHISAEELEARCSCELGITIDQVSRRFEDYLADK NTWAANHAPQLLSRPVAYFSAEFGIHESVRIYSGGLGILSGDHIKSASDLGLNFIGVTLFYKEGYFRQYLNQDGWQNEDY PLQYPESLPVEKVTDEDGKDLIIELTIAQSTVYAQAWSLKVGRATLYLLDTNIPANEAHYREICSRVYGGDQNMRINQEI LLGIGGVKLLKALKLDPAVYHMNEGHSAFLTLELLAEQLGKGLSYQEAKAKVKEQCVFTTHTPVPAGHDRFSRDMMSYTF SKYLGQIGIDFEDMMKLGAENPADTSGLFTMTVLALQLSRCANGVSKLHGEVSREMWKHLYGTDDPNQVPIGHITNGVHT RSWSSGFTDRFWKNHAESIEELFSSRESAETVLARVSDSELWCMRYRLKRNLMDYISRYLSNQLYHQHQYTPYKPADSSR SAKSILSPDVLTIGFARRFATYKRAPLIFQDLERLNAIVNNANMPVQIIFAGKAHPHDDAGKEYIRQIVEHSRRPQFLGK VIFLENYNIGVAKRLISGVDVWLNNPVRPMEASGTSGQKTVLHGGLNLSIMDGWWCEAYNGTNGWSIGSGEENDNYDEQY RIDAAHLYEVLEHQVIPTFYERNEHNIPVRWLKNVRNAIASIAPVYNTDRMVKEYTMRYYLNDQRP >Mature_705_residues SKNISAVKKLSRNLWWSWDTEAKELFKNLSPLLWEKVNHNPVELLRHISAEELEARCSCELGITIDQVSRRFEDYLADKN TWAANHAPQLLSRPVAYFSAEFGIHESVRIYSGGLGILSGDHIKSASDLGLNFIGVTLFYKEGYFRQYLNQDGWQNEDYP LQYPESLPVEKVTDEDGKDLIIELTIAQSTVYAQAWSLKVGRATLYLLDTNIPANEAHYREICSRVYGGDQNMRINQEIL LGIGGVKLLKALKLDPAVYHMNEGHSAFLTLELLAEQLGKGLSYQEAKAKVKEQCVFTTHTPVPAGHDRFSRDMMSYTFS KYLGQIGIDFEDMMKLGAENPADTSGLFTMTVLALQLSRCANGVSKLHGEVSREMWKHLYGTDDPNQVPIGHITNGVHTR SWSSGFTDRFWKNHAESIEELFSSRESAETVLARVSDSELWCMRYRLKRNLMDYISRYLSNQLYHQHQYTPYKPADSSRS AKSILSPDVLTIGFARRFATYKRAPLIFQDLERLNAIVNNANMPVQIIFAGKAHPHDDAGKEYIRQIVEHSRRPQFLGKV IFLENYNIGVAKRLISGVDVWLNNPVRPMEASGTSGQKTVLHGGLNLSIMDGWWCEAYNGTNGWSIGSGEENDNYDEQYR IDAAHLYEVLEHQVIPTFYERNEHNIPVRWLKNVRNAIASIAPVYNTDRMVKEYTMRYYLNDQRP
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI21361370, Length=389, Percent_Identity=23.9074550128535, Blast_Score=80, Evalue=9e-15, Organism=Homo sapiens, GI5032009, Length=385, Percent_Identity=23.1168831168831, Blast_Score=78, Evalue=3e-14, Organism=Homo sapiens, GI257900462, Length=385, Percent_Identity=23.1168831168831, Blast_Score=78, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17564550, Length=582, Percent_Identity=22.8522336769759, Blast_Score=80, Evalue=4e-15, Organism=Caenorhabditis elegans, GI32566204, Length=582, Percent_Identity=22.8522336769759, Blast_Score=80, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011834 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 80622; Mature: 80491
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNISAVKKLSRNLWWSWDTEAKELFKNLSPLLWEKVNHNPVELLRHISAEELEARCSC CCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHCCHHHHHHHCCC ELGITIDQVSRRFEDYLADKNTWAANHAPQLLSRPVAYFSAEFGIHESVRIYSGGLGILS EECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCHHHHHHHHCCCCCCEEEEECCCCCCC GDHIKSASDLGLNFIGVTLFYKEGYFRQYLNQDGWQNEDYPLQYPESLPVEKVTDEDGKD CCCCCCHHHCCCEEEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE LIIELTIAQSTVYAQAWSLKVGRATLYLLDTNIPANEAHYREICSRVYGGDQNMRINQEI EEEEEEEECHHHHHHHHEEEECCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEECHHH LLGIGGVKLLKALKLDPAVYHMNEGHSAFLTLELLAEQLGKGLSYQEAKAKVKEQCVFTT HEECCHHHHHHHHHCCCCEEEECCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHEEEEE HTPVPAGHDRFSRDMMSYTFSKYLGQIGIDFEDMMKLGAENPADTSGLFTMTVLALQLSR CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH CANGVSKLHGEVSREMWKHLYGTDDPNQVPIGHITNGVHTRSWSSGFTDRFWKNHAESIE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHH ELFSSRESAETVLARVSDSELWCMRYRLKRNLMDYISRYLSNQLYHQHQYTPYKPADSSR HHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC SAKSILSPDVLTIGFARRFATYKRAPLIFQDLERLNAIVNNANMPVQIIFAGKAHPHDDA HHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHH GKEYIRQIVEHSRRPQFLGKVIFLENYNIGVAKRLISGVDVWLNNPVRPMEASGTSGQKT HHHHHHHHHHHCCCHHHHCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE VLHGGLNLSIMDGWWCEAYNGTNGWSIGSGEENDNYDEQYRIDAAHLYEVLEHQVIPTFY EEECCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCHHH ERNEHNIPVRWLKNVRNAIASIAPVYNTDRMVKEYTMRYYLNDQRP HCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SKNISAVKKLSRNLWWSWDTEAKELFKNLSPLLWEKVNHNPVELLRHISAEELEARCSC CCCHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHCCHHHHHHHCCC ELGITIDQVSRRFEDYLADKNTWAANHAPQLLSRPVAYFSAEFGIHESVRIYSGGLGILS EECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCHHHHHHHHCCCCCCEEEEECCCCCCC GDHIKSASDLGLNFIGVTLFYKEGYFRQYLNQDGWQNEDYPLQYPESLPVEKVTDEDGKD CCCCCCHHHCCCEEEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE LIIELTIAQSTVYAQAWSLKVGRATLYLLDTNIPANEAHYREICSRVYGGDQNMRINQEI EEEEEEEECHHHHHHHHEEEECCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEECHHH LLGIGGVKLLKALKLDPAVYHMNEGHSAFLTLELLAEQLGKGLSYQEAKAKVKEQCVFTT HEECCHHHHHHHHHCCCCEEEECCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHEEEEE HTPVPAGHDRFSRDMMSYTFSKYLGQIGIDFEDMMKLGAENPADTSGLFTMTVLALQLSR CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH CANGVSKLHGEVSREMWKHLYGTDDPNQVPIGHITNGVHTRSWSSGFTDRFWKNHAESIE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHH ELFSSRESAETVLARVSDSELWCMRYRLKRNLMDYISRYLSNQLYHQHQYTPYKPADSSR HHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC SAKSILSPDVLTIGFARRFATYKRAPLIFQDLERLNAIVNNANMPVQIIFAGKAHPHDDA HHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHH GKEYIRQIVEHSRRPQFLGKVIFLENYNIGVAKRLISGVDVWLNNPVRPMEASGTSGQKT HHHHHHHHHHHCCCHHHHCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE VLHGGLNLSIMDGWWCEAYNGTNGWSIGSGEENDNYDEQYRIDAAHLYEVLEHQVIPTFY EEECCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCHHH ERNEHNIPVRWLKNVRNAIASIAPVYNTDRMVKEYTMRYYLNDQRP HCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]