Definition Chlorobaculum parvum NCIB 8327 chromosome, complete genome.
Accession NC_011027
Length 2,289,249

Click here to switch to the map view.

The map label for this gene is glgP [H]

Identifier: 193213170

GI number: 193213170

Start: 1668544

End: 1670664

Strand: Direct

Name: glgP [H]

Synonym: Cpar_1525

Alternate gene names: 193213170

Gene position: 1668544-1670664 (Clockwise)

Preceding gene: 193213168

Following gene: 193213171

Centisome position: 72.89

GC content: 57.71

Gene sequence:

>2121_bases
ATGTCAAAAAATATCTCCGCCGTTAAAAAGCTCTCAAGGAACCTGTGGTGGTCATGGGATACCGAAGCCAAAGAGCTGTT
CAAAAATCTCTCGCCACTGCTGTGGGAGAAGGTCAATCACAACCCGGTGGAGCTGCTGCGGCACATCTCGGCAGAAGAGC
TCGAAGCCCGCTGCTCGTGCGAGCTGGGCATCACCATCGACCAGGTCAGCAGGCGCTTTGAAGATTACCTTGCGGACAAG
AACACCTGGGCGGCTAACCACGCGCCCCAACTGCTTTCCAGACCGGTGGCCTATTTCAGCGCCGAGTTCGGCATCCACGA
AAGTGTCCGGATTTACTCTGGCGGCCTCGGCATTCTCTCCGGCGATCACATCAAATCGGCCAGCGATCTCGGCCTCAACT
TCATCGGCGTCACCCTTTTTTACAAAGAGGGCTATTTCCGCCAGTACCTGAACCAGGATGGCTGGCAGAACGAAGATTAC
CCGCTGCAATACCCTGAAAGCCTGCCGGTCGAGAAGGTGACCGATGAAGACGGCAAGGATCTGATCATCGAGCTGACCAT
CGCGCAGAGCACCGTGTATGCGCAAGCCTGGAGCCTGAAGGTCGGACGCGCCACGCTCTACCTGCTCGACACAAACATTC
CGGCCAACGAAGCGCACTACCGTGAAATCTGCTCGCGGGTCTATGGCGGCGACCAGAACATGCGCATCAATCAGGAGATT
CTGCTCGGCATCGGCGGCGTCAAGCTGCTCAAGGCACTGAAGCTCGATCCTGCGGTCTATCACATGAACGAGGGGCACTC
GGCCTTCCTGACGCTTGAACTGCTTGCCGAACAGCTCGGCAAGGGGCTCTCCTACCAGGAGGCGAAAGCCAAAGTCAAGG
AGCAGTGCGTCTTCACCACGCACACTCCTGTGCCTGCCGGCCACGACCGCTTTTCGAGAGACATGATGAGCTACACCTTC
TCGAAATACCTGGGTCAAATCGGCATCGATTTCGAAGACATGATGAAGCTCGGGGCAGAAAATCCGGCGGACACCTCGGG
ACTGTTCACCATGACCGTGCTCGCCCTGCAACTCTCCCGCTGCGCCAATGGCGTCTCGAAGCTGCACGGCGAGGTTTCAC
GTGAGATGTGGAAGCACCTCTACGGCACCGACGACCCCAACCAGGTGCCGATCGGCCACATCACCAACGGTGTGCACACC
AGAAGCTGGAGCAGCGGTTTCACCGACCGGTTCTGGAAAAACCATGCCGAAAGCATTGAAGAGCTGTTCTCGTCGAGAGA
GTCTGCGGAAACTGTTCTGGCTCGTGTTTCCGACAGCGAACTGTGGTGCATGCGCTACCGTCTGAAGCGCAATCTTATGG
ACTACATTTCGCGCTACCTGTCCAACCAGCTCTATCACCAGCACCAGTACACGCCGTACAAACCGGCGGACTCATCGAGA
TCGGCCAAAAGCATTCTGTCGCCCGACGTGCTGACCATCGGTTTCGCCCGGCGTTTCGCGACCTACAAGCGCGCTCCGCT
CATCTTCCAGGATCTGGAGAGGCTGAACGCCATCGTCAACAATGCGAACATGCCGGTGCAGATCATCTTTGCCGGCAAAG
CCCATCCGCACGACGATGCAGGCAAGGAGTACATCCGCCAGATCGTCGAACACTCGCGCCGCCCGCAGTTCCTCGGTAAA
GTGATTTTCCTTGAGAACTACAATATCGGCGTGGCCAAGCGCCTCATTTCAGGCGTCGATGTCTGGCTGAACAACCCGGT
CAGGCCGATGGAAGCCAGCGGCACCTCCGGCCAGAAAACCGTGCTGCACGGCGGCCTGAACCTGAGCATCATGGACGGCT
GGTGGTGTGAGGCCTACAACGGCACCAACGGCTGGTCGATCGGCAGCGGAGAGGAGAACGACAATTACGACGAGCAGTAT
CGCATCGATGCCGCCCACCTGTACGAAGTGCTCGAACACCAGGTCATTCCAACCTTCTACGAGCGCAACGAGCACAACAT
TCCGGTCAGGTGGCTGAAAAACGTGCGCAACGCCATTGCCTCCATCGCTCCGGTCTATAACACCGACCGCATGGTCAAGG
AGTACACCATGCGCTACTACCTCAATGACCAGCGTCCCTGA

Upstream 100 bases:

>100_bases
GTTCACCCTTGCGCTCCCGCCTCGGGGAGGCATCCGGCAAGATACTCCATTTTCTTAATCTGCACCACCTGAGGCGAGCA
GCAAAACCCTTAAATCCAAT

Downstream 100 bases:

>100_bases
GCCATTAACAGAGTACCATGACCTCATCAGCTTCAACAGTTACCAACTCCCCTGCCGCCATCAATCTCGGCAGGGGTCTC
GACCTCCGCTCGCCGGTCAT

Product: alpha-glucan phosphorylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 706; Mature: 705

Protein sequence:

>706_residues
MSKNISAVKKLSRNLWWSWDTEAKELFKNLSPLLWEKVNHNPVELLRHISAEELEARCSCELGITIDQVSRRFEDYLADK
NTWAANHAPQLLSRPVAYFSAEFGIHESVRIYSGGLGILSGDHIKSASDLGLNFIGVTLFYKEGYFRQYLNQDGWQNEDY
PLQYPESLPVEKVTDEDGKDLIIELTIAQSTVYAQAWSLKVGRATLYLLDTNIPANEAHYREICSRVYGGDQNMRINQEI
LLGIGGVKLLKALKLDPAVYHMNEGHSAFLTLELLAEQLGKGLSYQEAKAKVKEQCVFTTHTPVPAGHDRFSRDMMSYTF
SKYLGQIGIDFEDMMKLGAENPADTSGLFTMTVLALQLSRCANGVSKLHGEVSREMWKHLYGTDDPNQVPIGHITNGVHT
RSWSSGFTDRFWKNHAESIEELFSSRESAETVLARVSDSELWCMRYRLKRNLMDYISRYLSNQLYHQHQYTPYKPADSSR
SAKSILSPDVLTIGFARRFATYKRAPLIFQDLERLNAIVNNANMPVQIIFAGKAHPHDDAGKEYIRQIVEHSRRPQFLGK
VIFLENYNIGVAKRLISGVDVWLNNPVRPMEASGTSGQKTVLHGGLNLSIMDGWWCEAYNGTNGWSIGSGEENDNYDEQY
RIDAAHLYEVLEHQVIPTFYERNEHNIPVRWLKNVRNAIASIAPVYNTDRMVKEYTMRYYLNDQRP

Sequences:

>Translated_706_residues
MSKNISAVKKLSRNLWWSWDTEAKELFKNLSPLLWEKVNHNPVELLRHISAEELEARCSCELGITIDQVSRRFEDYLADK
NTWAANHAPQLLSRPVAYFSAEFGIHESVRIYSGGLGILSGDHIKSASDLGLNFIGVTLFYKEGYFRQYLNQDGWQNEDY
PLQYPESLPVEKVTDEDGKDLIIELTIAQSTVYAQAWSLKVGRATLYLLDTNIPANEAHYREICSRVYGGDQNMRINQEI
LLGIGGVKLLKALKLDPAVYHMNEGHSAFLTLELLAEQLGKGLSYQEAKAKVKEQCVFTTHTPVPAGHDRFSRDMMSYTF
SKYLGQIGIDFEDMMKLGAENPADTSGLFTMTVLALQLSRCANGVSKLHGEVSREMWKHLYGTDDPNQVPIGHITNGVHT
RSWSSGFTDRFWKNHAESIEELFSSRESAETVLARVSDSELWCMRYRLKRNLMDYISRYLSNQLYHQHQYTPYKPADSSR
SAKSILSPDVLTIGFARRFATYKRAPLIFQDLERLNAIVNNANMPVQIIFAGKAHPHDDAGKEYIRQIVEHSRRPQFLGK
VIFLENYNIGVAKRLISGVDVWLNNPVRPMEASGTSGQKTVLHGGLNLSIMDGWWCEAYNGTNGWSIGSGEENDNYDEQY
RIDAAHLYEVLEHQVIPTFYERNEHNIPVRWLKNVRNAIASIAPVYNTDRMVKEYTMRYYLNDQRP
>Mature_705_residues
SKNISAVKKLSRNLWWSWDTEAKELFKNLSPLLWEKVNHNPVELLRHISAEELEARCSCELGITIDQVSRRFEDYLADKN
TWAANHAPQLLSRPVAYFSAEFGIHESVRIYSGGLGILSGDHIKSASDLGLNFIGVTLFYKEGYFRQYLNQDGWQNEDYP
LQYPESLPVEKVTDEDGKDLIIELTIAQSTVYAQAWSLKVGRATLYLLDTNIPANEAHYREICSRVYGGDQNMRINQEIL
LGIGGVKLLKALKLDPAVYHMNEGHSAFLTLELLAEQLGKGLSYQEAKAKVKEQCVFTTHTPVPAGHDRFSRDMMSYTFS
KYLGQIGIDFEDMMKLGAENPADTSGLFTMTVLALQLSRCANGVSKLHGEVSREMWKHLYGTDDPNQVPIGHITNGVHTR
SWSSGFTDRFWKNHAESIEELFSSRESAETVLARVSDSELWCMRYRLKRNLMDYISRYLSNQLYHQHQYTPYKPADSSRS
AKSILSPDVLTIGFARRFATYKRAPLIFQDLERLNAIVNNANMPVQIIFAGKAHPHDDAGKEYIRQIVEHSRRPQFLGKV
IFLENYNIGVAKRLISGVDVWLNNPVRPMEASGTSGQKTVLHGGLNLSIMDGWWCEAYNGTNGWSIGSGEENDNYDEQYR
IDAAHLYEVLEHQVIPTFYERNEHNIPVRWLKNVRNAIASIAPVYNTDRMVKEYTMRYYLNDQRP

Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [

COG id: COG0058

COG function: function code G; Glucan phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycogen phosphorylase family [H]

Homologues:

Organism=Homo sapiens, GI21361370, Length=389, Percent_Identity=23.9074550128535, Blast_Score=80, Evalue=9e-15,
Organism=Homo sapiens, GI5032009, Length=385, Percent_Identity=23.1168831168831, Blast_Score=78, Evalue=3e-14,
Organism=Homo sapiens, GI257900462, Length=385, Percent_Identity=23.1168831168831, Blast_Score=78, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17564550, Length=582, Percent_Identity=22.8522336769759, Blast_Score=80, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI32566204, Length=582, Percent_Identity=22.8522336769759, Blast_Score=80, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011834
- InterPro:   IPR000811 [H]

Pfam domain/function: PF00343 Phosphorylase [H]

EC number: =2.4.1.1 [H]

Molecular weight: Translated: 80622; Mature: 80491

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNISAVKKLSRNLWWSWDTEAKELFKNLSPLLWEKVNHNPVELLRHISAEELEARCSC
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHCCHHHHHHHCCC
ELGITIDQVSRRFEDYLADKNTWAANHAPQLLSRPVAYFSAEFGIHESVRIYSGGLGILS
EECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCHHHHHHHHCCCCCCEEEEECCCCCCC
GDHIKSASDLGLNFIGVTLFYKEGYFRQYLNQDGWQNEDYPLQYPESLPVEKVTDEDGKD
CCCCCCHHHCCCEEEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
LIIELTIAQSTVYAQAWSLKVGRATLYLLDTNIPANEAHYREICSRVYGGDQNMRINQEI
EEEEEEEECHHHHHHHHEEEECCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEECHHH
LLGIGGVKLLKALKLDPAVYHMNEGHSAFLTLELLAEQLGKGLSYQEAKAKVKEQCVFTT
HEECCHHHHHHHHHCCCCEEEECCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHEEEEE
HTPVPAGHDRFSRDMMSYTFSKYLGQIGIDFEDMMKLGAENPADTSGLFTMTVLALQLSR
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
CANGVSKLHGEVSREMWKHLYGTDDPNQVPIGHITNGVHTRSWSSGFTDRFWKNHAESIE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
ELFSSRESAETVLARVSDSELWCMRYRLKRNLMDYISRYLSNQLYHQHQYTPYKPADSSR
HHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SAKSILSPDVLTIGFARRFATYKRAPLIFQDLERLNAIVNNANMPVQIIFAGKAHPHDDA
HHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHH
GKEYIRQIVEHSRRPQFLGKVIFLENYNIGVAKRLISGVDVWLNNPVRPMEASGTSGQKT
HHHHHHHHHHHCCCHHHHCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE
VLHGGLNLSIMDGWWCEAYNGTNGWSIGSGEENDNYDEQYRIDAAHLYEVLEHQVIPTFY
EEECCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCHHH
ERNEHNIPVRWLKNVRNAIASIAPVYNTDRMVKEYTMRYYLNDQRP
HCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SKNISAVKKLSRNLWWSWDTEAKELFKNLSPLLWEKVNHNPVELLRHISAEELEARCSC
CCCHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHCCHHHHHHHCCC
ELGITIDQVSRRFEDYLADKNTWAANHAPQLLSRPVAYFSAEFGIHESVRIYSGGLGILS
EECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCHHHHHHHHCCCCCCEEEEECCCCCCC
GDHIKSASDLGLNFIGVTLFYKEGYFRQYLNQDGWQNEDYPLQYPESLPVEKVTDEDGKD
CCCCCCHHHCCCEEEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
LIIELTIAQSTVYAQAWSLKVGRATLYLLDTNIPANEAHYREICSRVYGGDQNMRINQEI
EEEEEEEECHHHHHHHHEEEECCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEECHHH
LLGIGGVKLLKALKLDPAVYHMNEGHSAFLTLELLAEQLGKGLSYQEAKAKVKEQCVFTT
HEECCHHHHHHHHHCCCCEEEECCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHEEEEE
HTPVPAGHDRFSRDMMSYTFSKYLGQIGIDFEDMMKLGAENPADTSGLFTMTVLALQLSR
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
CANGVSKLHGEVSREMWKHLYGTDDPNQVPIGHITNGVHTRSWSSGFTDRFWKNHAESIE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
ELFSSRESAETVLARVSDSELWCMRYRLKRNLMDYISRYLSNQLYHQHQYTPYKPADSSR
HHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SAKSILSPDVLTIGFARRFATYKRAPLIFQDLERLNAIVNNANMPVQIIFAGKAHPHDDA
HHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHH
GKEYIRQIVEHSRRPQFLGKVIFLENYNIGVAKRLISGVDVWLNNPVRPMEASGTSGQKT
HHHHHHHHHHHCCCHHHHCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE
VLHGGLNLSIMDGWWCEAYNGTNGWSIGSGEENDNYDEQYRIDAAHLYEVLEHQVIPTFY
EEECCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCHHH
ERNEHNIPVRWLKNVRNAIASIAPVYNTDRMVKEYTMRYYLNDQRP
HCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]