| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
Click here to switch to the map view.
The map label for this gene is ftnA [H]
Identifier: 193213168
GI number: 193213168
Start: 1666871
End: 1667365
Strand: Direct
Name: ftnA [H]
Synonym: Cpar_1523
Alternate gene names: 193213168
Gene position: 1666871-1667365 (Clockwise)
Preceding gene: 193213167
Following gene: 193213170
Centisome position: 72.81
GC content: 55.15
Gene sequence:
>495_bases ATGCTCAGCAAAAAACTTCAGCAGGCGTTCAACGAACAGATCAACCATGAGATGGCTTCGGCCTATCTTTACCTGTCGAT GGCGGCTTACGCCCATTCGATGAATCTTCCCGGATTCGCTCACTGGCTCGAACTTCAGTACAAAGAAGAGCAGGGTCATG CCATGAAGCTCTACAAGTTCGTCAACGAGCGCGGCGGCAAAGTTGAATTGCTTGCCATCCCCCAGCCGACCTCGGAGTTC AAATCGCCGGCCCACCTGTTCGAAGAGGTACTGAGCCACGAACGAAAAATCACGGCATTGATCAACAAGCTGTACGAAGC TGCCGTCGAAGCGAAGGATTACGCAGCCCAGGTGCTCCTGCACTGGTTCATCGAAGAGCAGGTTGAGGAAGAGGCGGCTG CGAGCGAAATTCTCGGCACCATCAAGATGGCGGGGGAAAAGGGACACGCTCTGGTCATGATGGACCGTCAGCTCGCCCGG CGCGGCATGAACTGA
Upstream 100 bases:
>100_bases ACAGAATGCTGAAACGATCAGCCCCCCTTCATGGTTGGTTGTGCGACAGATAATCCTGAACATCACACAACCAACCATTC CCCAACTCAAGGAGACACCT
Downstream 100 bases:
>100_bases CTTGATCCCGGAAATTCTGTTTCAAGATCGACCGAACCCTGGCTTTTGTCAGGGTTCTTTTTTTTAGCAGAATTCCGGAA ATCTGCATTCCGGAGCTTTA
Product: Ferritin Dps family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MLSKKLQQAFNEQINHEMASAYLYLSMAAYAHSMNLPGFAHWLELQYKEEQGHAMKLYKFVNERGGKVELLAIPQPTSEF KSPAHLFEEVLSHERKITALINKLYEAAVEAKDYAAQVLLHWFIEEQVEEEAAASEILGTIKMAGEKGHALVMMDRQLAR RGMN
Sequences:
>Translated_164_residues MLSKKLQQAFNEQINHEMASAYLYLSMAAYAHSMNLPGFAHWLELQYKEEQGHAMKLYKFVNERGGKVELLAIPQPTSEF KSPAHLFEEVLSHERKITALINKLYEAAVEAKDYAAQVLLHWFIEEQVEEEAAASEILGTIKMAGEKGHALVMMDRQLAR RGMN >Mature_164_residues MLSKKLQQAFNEQINHEMASAYLYLSMAAYAHSMNLPGFAHWLELQYKEEQGHAMKLYKFVNERGGKVELLAIPQPTSEF KSPAHLFEEVLSHERKITALINKLYEAAVEAKDYAAQVLLHWFIEEQVEEEAAASEILGTIKMAGEKGHALVMMDRQLAR RGMN
Specific function: May alleviate iron toxicity in the presence of oxygen [H]
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Homo sapiens, GI29126241, Length=150, Percent_Identity=32, Blast_Score=64, Evalue=4e-11, Organism=Escherichia coli, GI1788216, Length=159, Percent_Identity=32.0754716981132, Blast_Score=96, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: =1.16.3.1 [H]
Molecular weight: Translated: 18708; Mature: 18708
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSKKLQQAFNEQINHEMASAYLYLSMAAYAHSMNLPGFAHWLELQYKEEQGHAMKLYKF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHH VNERGGKVELLAIPQPTSEFKSPAHLFEEVLSHERKITALINKLYEAAVEAKDYAAQVLL HHCCCCEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HWFIEEQVEEEAAASEILGTIKMAGEKGHALVMMDRQLARRGMN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHCCCC >Mature Secondary Structure MLSKKLQQAFNEQINHEMASAYLYLSMAAYAHSMNLPGFAHWLELQYKEEQGHAMKLYKF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHH VNERGGKVELLAIPQPTSEFKSPAHLFEEVLSHERKITALINKLYEAAVEAKDYAAQVLL HHCCCCEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HWFIEEQVEEEAAASEILGTIKMAGEKGHALVMMDRQLARRGMN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA