Definition Chlorobaculum parvum NCIB 8327 chromosome, complete genome.
Accession NC_011027
Length 2,289,249

Click here to switch to the map view.

The map label for this gene is ftnA [H]

Identifier: 193213168

GI number: 193213168

Start: 1666871

End: 1667365

Strand: Direct

Name: ftnA [H]

Synonym: Cpar_1523

Alternate gene names: 193213168

Gene position: 1666871-1667365 (Clockwise)

Preceding gene: 193213167

Following gene: 193213170

Centisome position: 72.81

GC content: 55.15

Gene sequence:

>495_bases
ATGCTCAGCAAAAAACTTCAGCAGGCGTTCAACGAACAGATCAACCATGAGATGGCTTCGGCCTATCTTTACCTGTCGAT
GGCGGCTTACGCCCATTCGATGAATCTTCCCGGATTCGCTCACTGGCTCGAACTTCAGTACAAAGAAGAGCAGGGTCATG
CCATGAAGCTCTACAAGTTCGTCAACGAGCGCGGCGGCAAAGTTGAATTGCTTGCCATCCCCCAGCCGACCTCGGAGTTC
AAATCGCCGGCCCACCTGTTCGAAGAGGTACTGAGCCACGAACGAAAAATCACGGCATTGATCAACAAGCTGTACGAAGC
TGCCGTCGAAGCGAAGGATTACGCAGCCCAGGTGCTCCTGCACTGGTTCATCGAAGAGCAGGTTGAGGAAGAGGCGGCTG
CGAGCGAAATTCTCGGCACCATCAAGATGGCGGGGGAAAAGGGACACGCTCTGGTCATGATGGACCGTCAGCTCGCCCGG
CGCGGCATGAACTGA

Upstream 100 bases:

>100_bases
ACAGAATGCTGAAACGATCAGCCCCCCTTCATGGTTGGTTGTGCGACAGATAATCCTGAACATCACACAACCAACCATTC
CCCAACTCAAGGAGACACCT

Downstream 100 bases:

>100_bases
CTTGATCCCGGAAATTCTGTTTCAAGATCGACCGAACCCTGGCTTTTGTCAGGGTTCTTTTTTTTAGCAGAATTCCGGAA
ATCTGCATTCCGGAGCTTTA

Product: Ferritin Dps family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MLSKKLQQAFNEQINHEMASAYLYLSMAAYAHSMNLPGFAHWLELQYKEEQGHAMKLYKFVNERGGKVELLAIPQPTSEF
KSPAHLFEEVLSHERKITALINKLYEAAVEAKDYAAQVLLHWFIEEQVEEEAAASEILGTIKMAGEKGHALVMMDRQLAR
RGMN

Sequences:

>Translated_164_residues
MLSKKLQQAFNEQINHEMASAYLYLSMAAYAHSMNLPGFAHWLELQYKEEQGHAMKLYKFVNERGGKVELLAIPQPTSEF
KSPAHLFEEVLSHERKITALINKLYEAAVEAKDYAAQVLLHWFIEEQVEEEAAASEILGTIKMAGEKGHALVMMDRQLAR
RGMN
>Mature_164_residues
MLSKKLQQAFNEQINHEMASAYLYLSMAAYAHSMNLPGFAHWLELQYKEEQGHAMKLYKFVNERGGKVELLAIPQPTSEF
KSPAHLFEEVLSHERKITALINKLYEAAVEAKDYAAQVLLHWFIEEQVEEEAAASEILGTIKMAGEKGHALVMMDRQLAR
RGMN

Specific function: May alleviate iron toxicity in the presence of oxygen [H]

COG id: COG1528

COG function: function code P; Ferritin-like protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ferritin-like diiron domain [H]

Homologues:

Organism=Homo sapiens, GI29126241, Length=150, Percent_Identity=32, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1788216, Length=159, Percent_Identity=32.0754716981132, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331
- InterPro:   IPR001519 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: =1.16.3.1 [H]

Molecular weight: Translated: 18708; Mature: 18708

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKKLQQAFNEQINHEMASAYLYLSMAAYAHSMNLPGFAHWLELQYKEEQGHAMKLYKF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHH
VNERGGKVELLAIPQPTSEFKSPAHLFEEVLSHERKITALINKLYEAAVEAKDYAAQVLL
HHCCCCEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HWFIEEQVEEEAAASEILGTIKMAGEKGHALVMMDRQLARRGMN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHCCCC
>Mature Secondary Structure
MLSKKLQQAFNEQINHEMASAYLYLSMAAYAHSMNLPGFAHWLELQYKEEQGHAMKLYKF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHH
VNERGGKVELLAIPQPTSEFKSPAHLFEEVLSHERKITALINKLYEAAVEAKDYAAQVLL
HHCCCCEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HWFIEEQVEEEAAASEILGTIKMAGEKGHALVMMDRQLARRGMN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA