Click here to switch to the map view.

The map label for this gene is yisS [H]

Identifier: 193212872

GI number: 193212872

Start: 1333092

End: 1334126

Strand: Direct

Name: yisS [H]

Synonym: Cpar_1220

Alternate gene names: 193212872

Gene position: 1333092-1334126 (Clockwise)

Preceding gene: 193212871

Following gene: 193212873

Centisome position: 58.23

GC content: 59.61

Gene sequence:

>1035_bases
ATGCGCATAGGCGTTGCAGGCGTCGGCAAGCTCGGCGAATTCCATACGAACCTACTCAAACAGATCGCCGCCGAGAACCC
GGATGTGGAGCTTTCCGGTGTGTTCGACCTGAACCCCGAGCGATTGCAGGAGATTGGCAAAAAGTACGATGTGCACTGCT
TCGGCTCGCTGGCGGAACTGGCCGACACGTGCGACGCTGCGGTGATCGCCACGACCACCAGCTCGCACTACGTCATCGCC
AAACAGCTTCTCGAAGCGGGACTGAGCCTGTTCATCGAAAAGCCGATCACGGCAACCCTTGAGGAGGCCGACGAGCTGAT
CCGGCTCGAAAAGGAGAAGGGACTGACCATCCAGGTTGGCCACATCGAACGCTTCAACCCGGCATTGCTGGCGGTCGAGC
CGTACATTGGCGAGCCAATGTACATCCAGGCCGAGCGGCTGAGCGGCTTTTCACGCCGCGTAACCGACGTCTCGGTGGTG
CTCGACCTGATGATTCACGATATCGACCTGGTGCTCTCGCTCATCAAGTCCGACATTCGCAGCATCGCGGCTTCGGGCGT
GAAGGTTTTCTCGAACGAGCTGGACATGGCCACGGCGCGCATCGAATTCGAGAACGGCGCCATCGCCAACGTCACGGCAA
GCCGCCTGAGCCGCAGCAAACTCCGCAAGCTGCGCTTCTTCAGCCGCAAGCCTAAAAGCTACGCTTCGCTGGACTTCAAC
AGCGGCAAGTCAGAGGTGTTCCGGCTGGTCAAGCCCGAGGATCGCTCCTCGAAAAATCCTATCAAGAACTTCGCCACCAA
AAAGATTCTGGAACAGTTCGGCGAAATTCAGGAGTCGCTGAAGGATCTGGCGCTCGACTACGTCAGCCCCGACGTGCCGA
AGGTCAACGCGCTGAAGGTGGAGTTGGAGCAGTTCATCGACGCCCTCCGCACAGGCCGTCCGGCGGTGGTCACCTCCGAA
GAGGGACGCCGTGCGTTGATGGTGGCGGGCAGAATCACCGATGAAATCCGGAAGAACACCGCTGACCTCGACTGA

Upstream 100 bases:

>100_bases
ATCATATCCATGAGCCTGTTCAAATACGACATCGAGGCGCTGGAGCCATCGGCAAGCGTAGCAGACTAACCAACCGACTG
CAAACGAAAAGGAGACAACC

Downstream 100 bases:

>100_bases
ATCCGACCCGACGAATACGATACCGACGACCGAATGCTGAAAGCAAAGCACGACGACATTCCAGAGATTTTGTACCGCAT
CGGAGACCTCGCCGACCAGG

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MRIGVAGVGKLGEFHTNLLKQIAAENPDVELSGVFDLNPERLQEIGKKYDVHCFGSLAELADTCDAAVIATTTSSHYVIA
KQLLEAGLSLFIEKPITATLEEADELIRLEKEKGLTIQVGHIERFNPALLAVEPYIGEPMYIQAERLSGFSRRVTDVSVV
LDLMIHDIDLVLSLIKSDIRSIAASGVKVFSNELDMATARIEFENGAIANVTASRLSRSKLRKLRFFSRKPKSYASLDFN
SGKSEVFRLVKPEDRSSKNPIKNFATKKILEQFGEIQESLKDLALDYVSPDVPKVNALKVELEQFIDALRTGRPAVVTSE
EGRRALMVAGRITDEIRKNTADLD

Sequences:

>Translated_344_residues
MRIGVAGVGKLGEFHTNLLKQIAAENPDVELSGVFDLNPERLQEIGKKYDVHCFGSLAELADTCDAAVIATTTSSHYVIA
KQLLEAGLSLFIEKPITATLEEADELIRLEKEKGLTIQVGHIERFNPALLAVEPYIGEPMYIQAERLSGFSRRVTDVSVV
LDLMIHDIDLVLSLIKSDIRSIAASGVKVFSNELDMATARIEFENGAIANVTASRLSRSKLRKLRFFSRKPKSYASLDFN
SGKSEVFRLVKPEDRSSKNPIKNFATKKILEQFGEIQESLKDLALDYVSPDVPKVNALKVELEQFIDALRTGRPAVVTSE
EGRRALMVAGRITDEIRKNTADLD
>Mature_344_residues
MRIGVAGVGKLGEFHTNLLKQIAAENPDVELSGVFDLNPERLQEIGKKYDVHCFGSLAELADTCDAAVIATTTSSHYVIA
KQLLEAGLSLFIEKPITATLEEADELIRLEKEKGLTIQVGHIERFNPALLAVEPYIGEPMYIQAERLSGFSRRVTDVSVV
LDLMIHDIDLVLSLIKSDIRSIAASGVKVFSNELDMATARIEFENGAIANVTASRLSRSKLRKLRFFSRKPKSYASLDFN
SGKSEVFRLVKPEDRSSKNPIKNFATKKILEQFGEIQESLKDLALDYVSPDVPKVNALKVELEQFIDALRTGRPAVVTSE
EGRRALMVAGRITDEIRKNTADLD

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787307, Length=127, Percent_Identity=32.2834645669291, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: NA

Molecular weight: Translated: 38104; Mature: 38104

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGVAGVGKLGEFHTNLLKQIAAENPDVELSGVFDLNPERLQEIGKKYDVHCFGSLAEL
CEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHH
ADTCDAAVIATTTSSHYVIAKQLLEAGLSLFIEKPITATLEEADELIRLEKEKGLTIQVG
HHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEC
HIERFNPALLAVEPYIGEPMYIQAERLSGFSRRVTDVSVVLDLMIHDIDLVLSLIKSDIR
CCCCCCCEEEEECCCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIAASGVKVFSNELDMATARIEFENGAIANVTASRLSRSKLRKLRFFSRKPKSYASLDFN
HHHHCCHHHHHHHHHHEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC
SGKSEVFRLVKPEDRSSKNPIKNFATKKILEQFGEIQESLKDLALDYVSPDVPKVNALKV
CCHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
ELEQFIDALRTGRPAVVTSEEGRRALMVAGRITDEIRKNTADLD
HHHHHHHHHHCCCCEEEECCCCCEEEEEEHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRIGVAGVGKLGEFHTNLLKQIAAENPDVELSGVFDLNPERLQEIGKKYDVHCFGSLAEL
CEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHH
ADTCDAAVIATTTSSHYVIAKQLLEAGLSLFIEKPITATLEEADELIRLEKEKGLTIQVG
HHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEC
HIERFNPALLAVEPYIGEPMYIQAERLSGFSRRVTDVSVVLDLMIHDIDLVLSLIKSDIR
CCCCCCCEEEEECCCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIAASGVKVFSNELDMATARIEFENGAIANVTASRLSRSKLRKLRFFSRKPKSYASLDFN
HHHHCCHHHHHHHHHHEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC
SGKSEVFRLVKPEDRSSKNPIKNFATKKILEQFGEIQESLKDLALDYVSPDVPKVNALKV
CCHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
ELEQFIDALRTGRPAVVTSEEGRRALMVAGRITDEIRKNTADLD
HHHHHHHHHHCCCCEEEECCCCCEEEEEEHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377; 8407808 [H]