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The map label for this gene is yfcH [C]

Identifier: 193211761

GI number: 193211761

Start: 99650

End: 100591

Strand: Direct

Name: yfcH [C]

Synonym: Cpar_0086

Alternate gene names: 193211761

Gene position: 99650-100591 (Clockwise)

Preceding gene: 193211760

Following gene: 193211763

Centisome position: 4.35

GC content: 56.05

Gene sequence:

>942_bases
ATGGACGGCCATATCGTCATTACGGGAGCGACCGGTGTTATCGGCAAAGAGGTTGCGAAGCGGCTCATCACTTCAGGACG
CAAGGTTGTTGTGTTTGCGCGTTCCACAGAGGCGGCGAAAGCCAAGGTGCCTGGCGCCGCAGCTTATGTGCACTGGGATT
CTGACATGGCGACGGGCGAGTGGACCAAATGGATCGACGGTGCGTACGGCGTAATTCATCTTGCAGGCAAGCCGTTGCTT
GAGGCGCGGTGGACCGAAGAGCACAAGAAGGCCTGTTACGATTCCCGCATCGACGGTACCCGGGCGCTGGTTGCAGCTAT
GACGGCCGCTTCGGCCAAGCCGAAGGTTTTTCTCTCATCCTCGGCCATCGGTTACTACGGCTCGTTCGAGCGGTGTCAGG
ATACGCCGCAGCTTGGCGAATCTGGGGCTCCAGGAAAGGATTTTCTGGCCCAAATCTGTTTCGACTGGGAAAAGGAAGCG
CTTCCGGCTGAGCAACTCGGTATTCGGGTAATACGCCTGAGGACGGGCATCGTGCTTTCCAGCAAGGGGGGGATGTTACA
GAAGATGATGACGCCGTTCGACTTTTTTATCGGCGGATCGATCGGTTCAGGCCAGCAGTGCATTTCGTGGATTCATCTCG
ATGACGAGGTGGAAATCATTCTCGAAGCGCTTGACAAGGAAGAGTTTCACGGCCCGATCAATGCCGTTGCTCCCGATCCG
GTGAACATGAAAGACTTTGCGGATGCGCTCGGTTCGGTGATGCATCGGCCATCACTTTTTCCGGTGCCTAAACTGGCTGT
TCAGGTACTCATGGGTGAGGGTGCGGAGTATGCCGTCAAAGGGCAGAACGTCAAGCCCGAGTTTCTTCAGCAGCATGGCT
TTTCGTTTGCCTGGGCCCACCTGCATGATGCGCTTGCCGATCTCATTTCCAGAAAGATTTGA

Upstream 100 bases:

>100_bases
CCCATTTCCTCCCTTCGGGAATTATTTCCTTTCCTCCTCCGGTTAACTGACGAATAGGCATACAATCCTGTTGCCGGATT
TTCATTTAAATCATACAGTT

Downstream 100 bases:

>100_bases
AGTTCCGGAGAGGCATAAAAAAAGCGGGCCAGGCCTTGTGAGCCTGCCCGCATGAGCTTTTTGACGAGAGAAAAACCGCT
ATTAGTAGCGCTCTCTTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MDGHIVITGATGVIGKEVAKRLITSGRKVVVFARSTEAAKAKVPGAAAYVHWDSDMATGEWTKWIDGAYGVIHLAGKPLL
EARWTEEHKKACYDSRIDGTRALVAAMTAASAKPKVFLSSSAIGYYGSFERCQDTPQLGESGAPGKDFLAQICFDWEKEA
LPAEQLGIRVIRLRTGIVLSSKGGMLQKMMTPFDFFIGGSIGSGQQCISWIHLDDEVEIILEALDKEEFHGPINAVAPDP
VNMKDFADALGSVMHRPSLFPVPKLAVQVLMGEGAEYAVKGQNVKPEFLQQHGFSFAWAHLHDALADLISRKI

Sequences:

>Translated_313_residues
MDGHIVITGATGVIGKEVAKRLITSGRKVVVFARSTEAAKAKVPGAAAYVHWDSDMATGEWTKWIDGAYGVIHLAGKPLL
EARWTEEHKKACYDSRIDGTRALVAAMTAASAKPKVFLSSSAIGYYGSFERCQDTPQLGESGAPGKDFLAQICFDWEKEA
LPAEQLGIRVIRLRTGIVLSSKGGMLQKMMTPFDFFIGGSIGSGQQCISWIHLDDEVEIILEALDKEEFHGPINAVAPDP
VNMKDFADALGSVMHRPSLFPVPKLAVQVLMGEGAEYAVKGQNVKPEFLQQHGFSFAWAHLHDALADLISRKI
>Mature_313_residues
MDGHIVITGATGVIGKEVAKRLITSGRKVVVFARSTEAAKAKVPGAAAYVHWDSDMATGEWTKWIDGAYGVIHLAGKPLL
EARWTEEHKKACYDSRIDGTRALVAAMTAASAKPKVFLSSSAIGYYGSFERCQDTPQLGESGAPGKDFLAQICFDWEKEA
LPAEQLGIRVIRLRTGIVLSSKGGMLQKMMTPFDFFIGGSIGSGQQCISWIHLDDEVEIILEALDKEEFHGPINAVAPDP
VNMKDFADALGSVMHRPSLFPVPKLAVQVLMGEGAEYAVKGQNVKPEFLQQHGFSFAWAHLHDALADLISRKI

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=314, Percent_Identity=29.6178343949045, Blast_Score=141, Evalue=6e-34,
Organism=Escherichia coli, GI1788642, Length=306, Percent_Identity=39.2156862745098, Blast_Score=221, Evalue=5e-59,
Organism=Drosophila melanogaster, GI28573846, Length=314, Percent_Identity=31.2101910828025, Blast_Score=146, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 34010; Mature: 34010

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGHIVITGATGVIGKEVAKRLITSGRKVVVFARSTEAAKAKVPGAAAYVHWDSDMATGE
CCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHCCCCCEEEEEECCCCCCCC
WTKWIDGAYGVIHLAGKPLLEARWTEEHKKACYDSRIDGTRALVAAMTAASAKPKVFLSS
HHHHHCCCCEEEEECCCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEC
SAIGYYGSFERCQDTPQLGESGAPGKDFLAQICFDWEKEALPAEQLGIRVIRLRTGIVLS
CCCCCCCCHHHHCCCHHCCCCCCCHHHHHHHHHHCCCHHCCCHHHHCEEEEEEEECEEEE
SKGGMLQKMMTPFDFFIGGSIGSGQQCISWIHLDDEVEIILEALDKEEFHGPINAVAPDP
CCCCHHHHHHCCHHHHCCCCCCCHHHHHEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCC
VNMKDFADALGSVMHRPSLFPVPKLAVQVLMGEGAEYAVKGQNVKPEFLQQHGFSFAWAH
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCCCCCHHHH
LHDALADLISRKI
HHHHHHHHHHCCC
>Mature Secondary Structure
MDGHIVITGATGVIGKEVAKRLITSGRKVVVFARSTEAAKAKVPGAAAYVHWDSDMATGE
CCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHCCCCCEEEEEECCCCCCCC
WTKWIDGAYGVIHLAGKPLLEARWTEEHKKACYDSRIDGTRALVAAMTAASAKPKVFLSS
HHHHHCCCCEEEEECCCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEC
SAIGYYGSFERCQDTPQLGESGAPGKDFLAQICFDWEKEALPAEQLGIRVIRLRTGIVLS
CCCCCCCCHHHHCCCHHCCCCCCCHHHHHHHHHHCCCHHCCCHHHHCEEEEEEEECEEEE
SKGGMLQKMMTPFDFFIGGSIGSGQQCISWIHLDDEVEIILEALDKEEFHGPINAVAPDP
CCCCHHHHHHCCHHHHCCCCCCCHHHHHEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCC
VNMKDFADALGSVMHRPSLFPVPKLAVQVLMGEGAEYAVKGQNVKPEFLQQHGFSFAWAH
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCCCCCHHHH
LHDALADLISRKI
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]