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The map label for this gene is ctpA [H]

Identifier: 193211695

GI number: 193211695

Start: 23854

End: 25596

Strand: Direct

Name: ctpA [H]

Synonym: Cpar_0019

Alternate gene names: 193211695

Gene position: 23854-25596 (Clockwise)

Preceding gene: 193211694

Following gene: 193211700

Centisome position: 1.04

GC content: 59.04

Gene sequence:

>1743_bases
GTGAGGTTTTCCGTGAGCCTTTTACGCACCGCTCTCTTCAGGCGTGTCGCCCGCTGGCCGCGGTTTGTCGCCGTCGCTTC
GGTTGCTGCCATGTCGGTCGTACTGACCACCGAGCCTGTACTGGCGAAGACCGAGGCCTCCTCGAACTTCTTTGAAGTCA
ACAAAAGCATCGAGCTGCTCGGCGATGTCTATCAAGAGGTGTCGCAGAATTATGTCGAGCCCATCGATGTCAGCGAGTTC
ATGTACTCGGGCATCGATGGCATGCTCGGCCAGCTCGATCCGTACACCGTTCTTCTCGACAAGGAGCAGTCCGGCGAGCT
CGACGAGCTGACCAGCGGCCAGTATGCGGGCATCGGCGTTACTATCGGCACCATTGCCGGTGATCTGTACGTGACCTCGA
TTTTTGAAGGGCAGGCCGCCGCGAAGGCTGGATTGCAGGTGGGCGACAAGATTGTGGCCGTGAACGGTGTCCGGGTTGGT
GACCGGCCGATCGAAGAAATTCGGGAATCCATCAAGGGCCGAGCCGGCACGACCGTCAGGCTCACCGTGCGCAAGGATGG
ATGGGGCGCCCGGAAGCAGTACCGCATTGCAAGGGGCGAAGTCCGGGTCAGCACGGTTTCCTATTCCGGGCTGTTCGGCT
CGGTGGCGTACATCCGCATGACCAGCTTTGCCCGGCACTCGCGCGCTGAAATGGTTGACGCGATCCGTGCCTTGCAGCAA
CAGGCTGCCAGGGAGAATCGCACCATGAGCGGCCTCGTGTTCGATCTGCGCGGCAATCCGGGCGGCCTCCTGAACTCGGC
GGTTGACGTTGCCGCGCTGTTCGTCGAAAAGGGCAGTCGCGTGGTCTCCACCAAAGGGCGGGCTGCCGACAGCGAACAGC
GCTATGTGACCAACATCGATCCGCTGTTGCCTTCGCTGCCGCTGGTTGTACTGATCGATGGCCAGAGCGCATCGGCTGCG
GAAATCGTGGCCGGGGCCATTCAGGAGCTTGACCGTGGCCTTATCGTCGGTGAAAATTCGTTCGGCAAGGGGCTGGTGCA
GTCGGTCATTGAGCTGCCCTACGACCACTCGCTCAAGATCACGACGGCCAAATACTACACCCCTTCAGGGCGACTGATCC
AGAAGCCGCTGGTTCATGGCGGCGCCTCTTGTCAGAACCCTCAGCGCAAGGTGCTTCTCTCTCCGGAGACGTATGATTCC
ACGAAAGTCTATTACACCCTCAACCATCGCAAAGTGTATGGCGGTGGCGGTATCAAGCCGGACTTTTCGGTCAGCGCTGC
GGAGCCGTCGGAGTACGAAAAGGCGCAGGACAAGGAGGGACTCCTGTTCACCTATGCCACGAATTTTCACCGGAAGCATC
GCGATATCTCCTTGCCGAAGATAGCTGCCACGCCGGTGCTCAAAGAGTTCAGGGAGTTTGTTGACGATAAGACGTTTGTC
TATCGTTCAGCACCACAGCGGCAGCTCGACAGCCTGAAAACGATGATCGGTAAGGATGGCGGCGAAAAGGACAGTCTGCT
TTCGGTCAGGCTTCAGGCATTCGACGAGGCGCTCGCCAGCTGGACAAAGCAAGGCATCCAGCGCGATTCACTTCGCATCA
CAACCGCCGTTCAGCGTGAAATCATTCGCCATTACGATGAGAAGGCGGCCTGGAGAAAAGGCATCGAGCTCGATCCGGTC
GCTGCAAAAGCTTTTGCGCTGCTCGCTGATCCGGTGAGTTATCAGAAGCTGCTCAAGCCGTAG

Upstream 100 bases:

>100_bases
AGTTCGCCGCCGAACATGGCCTGTCGATCTACACGCCGCTCATCGTCAAATACCGCGACGAGCGTACCGACAGCGCCACC
GCCCTCGAAAGCGCTCTCAG

Downstream 100 bases:

>100_bases
GCGCGAAGCCCAAGCTGCAAGCGCGATACTCAACCCCTGAGCCGCTGTTCGGCGAGCTTGCGCTGTTTGTGGATACCGAT
GACGATCATCAGGTTGCTGA

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 580; Mature: 580

Protein sequence:

>580_residues
MRFSVSLLRTALFRRVARWPRFVAVASVAAMSVVLTTEPVLAKTEASSNFFEVNKSIELLGDVYQEVSQNYVEPIDVSEF
MYSGIDGMLGQLDPYTVLLDKEQSGELDELTSGQYAGIGVTIGTIAGDLYVTSIFEGQAAAKAGLQVGDKIVAVNGVRVG
DRPIEEIRESIKGRAGTTVRLTVRKDGWGARKQYRIARGEVRVSTVSYSGLFGSVAYIRMTSFARHSRAEMVDAIRALQQ
QAARENRTMSGLVFDLRGNPGGLLNSAVDVAALFVEKGSRVVSTKGRAADSEQRYVTNIDPLLPSLPLVVLIDGQSASAA
EIVAGAIQELDRGLIVGENSFGKGLVQSVIELPYDHSLKITTAKYYTPSGRLIQKPLVHGGASCQNPQRKVLLSPETYDS
TKVYYTLNHRKVYGGGGIKPDFSVSAAEPSEYEKAQDKEGLLFTYATNFHRKHRDISLPKIAATPVLKEFREFVDDKTFV
YRSAPQRQLDSLKTMIGKDGGEKDSLLSVRLQAFDEALASWTKQGIQRDSLRITTAVQREIIRHYDEKAAWRKGIELDPV
AAKAFALLADPVSYQKLLKP

Sequences:

>Translated_580_residues
MRFSVSLLRTALFRRVARWPRFVAVASVAAMSVVLTTEPVLAKTEASSNFFEVNKSIELLGDVYQEVSQNYVEPIDVSEF
MYSGIDGMLGQLDPYTVLLDKEQSGELDELTSGQYAGIGVTIGTIAGDLYVTSIFEGQAAAKAGLQVGDKIVAVNGVRVG
DRPIEEIRESIKGRAGTTVRLTVRKDGWGARKQYRIARGEVRVSTVSYSGLFGSVAYIRMTSFARHSRAEMVDAIRALQQ
QAARENRTMSGLVFDLRGNPGGLLNSAVDVAALFVEKGSRVVSTKGRAADSEQRYVTNIDPLLPSLPLVVLIDGQSASAA
EIVAGAIQELDRGLIVGENSFGKGLVQSVIELPYDHSLKITTAKYYTPSGRLIQKPLVHGGASCQNPQRKVLLSPETYDS
TKVYYTLNHRKVYGGGGIKPDFSVSAAEPSEYEKAQDKEGLLFTYATNFHRKHRDISLPKIAATPVLKEFREFVDDKTFV
YRSAPQRQLDSLKTMIGKDGGEKDSLLSVRLQAFDEALASWTKQGIQRDSLRITTAVQREIIRHYDEKAAWRKGIELDPV
AAKAFALLADPVSYQKLLKP
>Mature_580_residues
MRFSVSLLRTALFRRVARWPRFVAVASVAAMSVVLTTEPVLAKTEASSNFFEVNKSIELLGDVYQEVSQNYVEPIDVSEF
MYSGIDGMLGQLDPYTVLLDKEQSGELDELTSGQYAGIGVTIGTIAGDLYVTSIFEGQAAAKAGLQVGDKIVAVNGVRVG
DRPIEEIRESIKGRAGTTVRLTVRKDGWGARKQYRIARGEVRVSTVSYSGLFGSVAYIRMTSFARHSRAEMVDAIRALQQ
QAARENRTMSGLVFDLRGNPGGLLNSAVDVAALFVEKGSRVVSTKGRAADSEQRYVTNIDPLLPSLPLVVLIDGQSASAA
EIVAGAIQELDRGLIVGENSFGKGLVQSVIELPYDHSLKITTAKYYTPSGRLIQKPLVHGGASCQNPQRKVLLSPETYDS
TKVYYTLNHRKVYGGGGIKPDFSVSAAEPSEYEKAQDKEGLLFTYATNFHRKHRDISLPKIAATPVLKEFREFVDDKTFV
YRSAPQRQLDSLKTMIGKDGGEKDSLLSVRLQAFDEALASWTKQGIQRDSLRITTAVQREIIRHYDEKAAWRKGIELDPV
AAKAFALLADPVSYQKLLKP

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=312, Percent_Identity=29.4871794871795, Blast_Score=93, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 63685; Mature: 63685

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFSVSLLRTALFRRVARWPRFVAVASVAAMSVVLTTEPVLAKTEASSNFFEVNKSIELL
CCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHEEEEECCCCEEECCCCCCCEEHHHHHHHH
GDVYQEVSQNYVEPIDVSEFMYSGIDGMLGQLDPYTVLLDKEQSGELDELTSGQYAGIGV
HHHHHHHHHHCCCCCCHHHHHHHCHHHHHCCCCCEEEEEECCCCCCHHHHCCCCCCEEEE
TIGTIAGDLYVTSIFEGQAAAKAGLQVGDKIVAVNGVRVGDRPIEEIRESIKGRAGTTVR
EHHHHHCHHEEEEECCCHHHHHHHHHCCCEEEEEECEECCCCHHHHHHHHHCCCCCCEEE
LTVRKDGWGARKQYRIARGEVRVSTVSYSGLFGSVAYIRMTSFARHSRAEMVDAIRALQQ
EEEECCCCCCCHHEEEECCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAARENRTMSGLVFDLRGNPGGLLNSAVDVAALFVEKGSRVVSTKGRAADSEQRYVTNID
HHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEECCCC
PLLPSLPLVVLIDGQSASAAEIVAGAIQELDRGLIVGENSFGKGLVQSVIELPYDHSLKI
HHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCEEE
TTAKYYTPSGRLIQKPLVHGGASCQNPQRKVLLSPETYDSTKVYYTLNHRKVYGGGGIKP
EEEEEECCCCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEEEEECEEEECCCCCCC
DFSVSAAEPSEYEKAQDKEGLLFTYATNFHRKHRDISLPKIAATPVLKEFREFVDDKTFV
CCCCCCCCCHHHHHCCCCCCEEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEE
YRSAPQRQLDSLKTMIGKDGGEKDSLLSVRLQAFDEALASWTKQGIQRDSLRITTAVQRE
ECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHH
IIRHYDEKAAWRKGIELDPVAAKAFALLADPVSYQKLLKP
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHCCC
>Mature Secondary Structure
MRFSVSLLRTALFRRVARWPRFVAVASVAAMSVVLTTEPVLAKTEASSNFFEVNKSIELL
CCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHEEEEECCCCEEECCCCCCCEEHHHHHHHH
GDVYQEVSQNYVEPIDVSEFMYSGIDGMLGQLDPYTVLLDKEQSGELDELTSGQYAGIGV
HHHHHHHHHHCCCCCCHHHHHHHCHHHHHCCCCCEEEEEECCCCCCHHHHCCCCCCEEEE
TIGTIAGDLYVTSIFEGQAAAKAGLQVGDKIVAVNGVRVGDRPIEEIRESIKGRAGTTVR
EHHHHHCHHEEEEECCCHHHHHHHHHCCCEEEEEECEECCCCHHHHHHHHHCCCCCCEEE
LTVRKDGWGARKQYRIARGEVRVSTVSYSGLFGSVAYIRMTSFARHSRAEMVDAIRALQQ
EEEECCCCCCCHHEEEECCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAARENRTMSGLVFDLRGNPGGLLNSAVDVAALFVEKGSRVVSTKGRAADSEQRYVTNID
HHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEECCCC
PLLPSLPLVVLIDGQSASAAEIVAGAIQELDRGLIVGENSFGKGLVQSVIELPYDHSLKI
HHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCEEE
TTAKYYTPSGRLIQKPLVHGGASCQNPQRKVLLSPETYDSTKVYYTLNHRKVYGGGGIKP
EEEEEECCCCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEEEEECEEEECCCCCCC
DFSVSAAEPSEYEKAQDKEGLLFTYATNFHRKHRDISLPKIAATPVLKEFREFVDDKTFV
CCCCCCCCCHHHHHCCCCCCEEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEE
YRSAPQRQLDSLKTMIGKDGGEKDSLLSVRLQAFDEALASWTKQGIQRDSLRITTAVQRE
ECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHH
IIRHYDEKAAWRKGIELDPVAAKAFALLADPVSYQKLLKP
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]