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The map label for this gene is yrkF [H]

Identifier: 193211700

GI number: 193211700

Start: 30605

End: 31072

Strand: Direct

Name: yrkF [H]

Synonym: Cpar_0025

Alternate gene names: 193211700

Gene position: 30605-31072 (Clockwise)

Preceding gene: 193211695

Following gene: 193211701

Centisome position: 1.34

GC content: 59.19

Gene sequence:

>468_bases
ATGAGCCGTTTGAACGACTTGCTGGAGAAGACTCTTTCCGAGATTCGGGAGATTATGCCGTGGAATCTGGTTGACCGGAT
GGCGGAGAATCCAGAGCTGATTATCCTTGATGTTCGCGAGCCAAAGGAGTTCGAGACGTTGCACATCGAGGGCTCGATCC
ATGTGCCGCGTGGCGTGCTGGAGTCGGCGTGCGAGTGGGATTACGACGATACCGTTCCTGCGCTGGTGACGGGCCGCGAC
AAGGAGATTGTGGTGGTGTGCCGCTCTGGCCGCCGGAGCGCGTTTGCCGCCAAAACCATGCAGGAGTTGGGCTTCACAAA
CGTGGTGTCGCTGAAGACGGGGCTTCGTGGCTGGAACGATTACGAGGAGCCACTGGTGAACAGCGCGGGCGAGACGGTGG
GCGAGGAGTTCGCGGACGACTTTTTCACCTCGAAGGTTCGGCCTGATCAGCTGAAACCGAAGCCCTGA

Upstream 100 bases:

>100_bases
CTGAATAGTTATATAATTGATTTTTGCGGCTTTGGGCTGCGTTTGTCCGTCCGCGTTCACGGATGGTAATAAAATCTGTA
ACCTGTTGATTTTCATAAAG

Downstream 100 bases:

>100_bases
GCGCTTTTCCGGAGGTATCGAGTTGAGTGCTATCACCATTCCGAGGCTGATGATTTCGGCTTCTTGGAAGAGCGCCGGGA
AGACCACGGTGGCGCTGGGG

Product: Rhodanese domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MSRLNDLLEKTLSEIREIMPWNLVDRMAENPELIILDVREPKEFETLHIEGSIHVPRGVLESACEWDYDDTVPALVTGRD
KEIVVVCRSGRRSAFAAKTMQELGFTNVVSLKTGLRGWNDYEEPLVNSAGETVGEEFADDFFTSKVRPDQLKPKP

Sequences:

>Translated_155_residues
MSRLNDLLEKTLSEIREIMPWNLVDRMAENPELIILDVREPKEFETLHIEGSIHVPRGVLESACEWDYDDTVPALVTGRD
KEIVVVCRSGRRSAFAAKTMQELGFTNVVSLKTGLRGWNDYEEPLVNSAGETVGEEFADDFFTSKVRPDQLKPKP
>Mature_154_residues
SRLNDLLEKTLSEIREIMPWNLVDRMAENPELIILDVREPKEFETLHIEGSIHVPRGVLESACEWDYDDTVPALVTGRDK
EIVVVCRSGRRSAFAAKTMQELGFTNVVSLKTGLRGWNDYEEPLVNSAGETVGEEFADDFFTSKVRPDQLKPKP

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR001455 [H]

Pfam domain/function: PF00581 Rhodanese; PF01206 SirA [H]

EC number: NA

Molecular weight: Translated: 17593; Mature: 17462

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLNDLLEKTLSEIREIMPWNLVDRMAENPELIILDVREPKEFETLHIEGSIHVPRGVL
CCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCEECCHHHH
ESACEWDYDDTVPALVTGRDKEIVVVCRSGRRSAFAAKTMQELGFTNVVSLKTGLRGWND
HHHHCCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCC
YEEPLVNSAGETVGEEFADDFFTSKVRPDQLKPKP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SRLNDLLEKTLSEIREIMPWNLVDRMAENPELIILDVREPKEFETLHIEGSIHVPRGVL
CHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCEECCHHHH
ESACEWDYDDTVPALVTGRDKEIVVVCRSGRRSAFAAKTMQELGFTNVVSLKTGLRGWND
HHHHCCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCC
YEEPLVNSAGETVGEEFADDFFTSKVRPDQLKPKP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]