Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192291573

Identifier: 192291573

GI number: 192291573

Start: 3447735

End: 3448694

Strand: Reverse

Name: 192291573

Synonym: Rpal_3200

Alternate gene names: NA

Gene position: 3448694-3447735 (Counterclockwise)

Preceding gene: 192291574

Following gene: 192291572

Centisome position: 60.04

GC content: 62.19

Gene sequence:

>960_bases
ATGGCCACCAAGATCACCATCAACGTCACGAACAACAGCACTTCGACCCAGAATTTCTTCTTCTTCCAGCAGCCGGCCGT
CTATTCCGGCGGCCCCAAGGTCTACACCAACAGCCTCTACAGTCAGACGCTGCTGCCGTATGCGACCTCGGGGTCGGTGC
TGAGCTTCACGATGATCCTGCAGTACTATGCTGGCGTTCAGCAGCAGGTGGACCCGCCGCAGATCGGGCAGCCGTCCGGC
CAGCTCGGCGCGATTCAGCCGATCGAGCTCACGCCTGCGTCGGGCGGTACGCCCACCAAGAACACCACTAACATGACGGT
TGATCCGTCGCTGGGCTTGTCCGTACCGGTCTCGACGGATGGCCCGCAGGCCGGCTCGTTCCGGATCGTGACGCCGGTGT
ACGATCCGGTGCTGATGAATTACAGCGCGGGCTCGGCGGTGCAGTCGCTGACGGGAGCCATCACGCTGTCGAACTTCGTC
ACCGCTCAACCCAACACCAATCTGGACTGCCAACCGATCATCAAGTTCTACGTCCAGACCGGCACCTACACCGCCGGAAC
GGTGATGAATTTCACCTCGTCGTCGGTGGGGGCGGCGCTTTGCGACGCCACCCCCGGCTTCACCACGTTCAACGTCAGCT
ACAACCCCAACGGCACCTGGACGGTGAAGAACATGGCGTTGTCTCAGCTCGCCAACGGCAGCCGCGGTCTGCTGGAGAAG
TCATCCTTCACGACCGAGCTGAACGCGACGGCCCAGATTGCCGAGGTTCTCAACGAGGCAGGTACGGCAGTTGTGTCCAC
GGGCCTGGCGGCGAACTTCTTGCGCCCCGTCACCGTGACCAACCTCACTGCGCCGGGTGCCATCATTCGGAATCGCGACT
ACCAGGTCGGGCCGGTCGGTGGCCGGTATCAGGGTTTGACCTGTACTGACGTCGCCGGAAATACCGCGGTTTTCGACTGA

Upstream 100 bases:

>100_bases
GTTGCATTCTGAGGCGGTTGCCTGCGTTACGGTTGTGCAACCCTTGGTTGTGTTTACTCCGAGGGTTCAACCGCACCCCG
TAGCCCGCCAGGAGACCATC

Downstream 100 bases:

>100_bases
GATCGAGCTAAGCTCTTGGTAAGGTAAAGCCCCCGAACCGGCGGTTCTGCTAATCGGCCGGAGGCCATGCTGCCTCCGGC
CATTCGCGTTGACAGAAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MATKITINVTNNSTSTQNFFFFQQPAVYSGGPKVYTNSLYSQTLLPYATSGSVLSFTMILQYYAGVQQQVDPPQIGQPSG
QLGAIQPIELTPASGGTPTKNTTNMTVDPSLGLSVPVSTDGPQAGSFRIVTPVYDPVLMNYSAGSAVQSLTGAITLSNFV
TAQPNTNLDCQPIIKFYVQTGTYTAGTVMNFTSSSVGAALCDATPGFTTFNVSYNPNGTWTVKNMALSQLANGSRGLLEK
SSFTTELNATAQIAEVLNEAGTAVVSTGLAANFLRPVTVTNLTAPGAIIRNRDYQVGPVGGRYQGLTCTDVAGNTAVFD

Sequences:

>Translated_319_residues
MATKITINVTNNSTSTQNFFFFQQPAVYSGGPKVYTNSLYSQTLLPYATSGSVLSFTMILQYYAGVQQQVDPPQIGQPSG
QLGAIQPIELTPASGGTPTKNTTNMTVDPSLGLSVPVSTDGPQAGSFRIVTPVYDPVLMNYSAGSAVQSLTGAITLSNFV
TAQPNTNLDCQPIIKFYVQTGTYTAGTVMNFTSSSVGAALCDATPGFTTFNVSYNPNGTWTVKNMALSQLANGSRGLLEK
SSFTTELNATAQIAEVLNEAGTAVVSTGLAANFLRPVTVTNLTAPGAIIRNRDYQVGPVGGRYQGLTCTDVAGNTAVFD
>Mature_318_residues
ATKITINVTNNSTSTQNFFFFQQPAVYSGGPKVYTNSLYSQTLLPYATSGSVLSFTMILQYYAGVQQQVDPPQIGQPSGQ
LGAIQPIELTPASGGTPTKNTTNMTVDPSLGLSVPVSTDGPQAGSFRIVTPVYDPVLMNYSAGSAVQSLTGAITLSNFVT
AQPNTNLDCQPIIKFYVQTGTYTAGTVMNFTSSSVGAALCDATPGFTTFNVSYNPNGTWTVKNMALSQLANGSRGLLEKS
SFTTELNATAQIAEVLNEAGTAVVSTGLAANFLRPVTVTNLTAPGAIIRNRDYQVGPVGGRYQGLTCTDVAGNTAVFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33430; Mature: 33299

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKITINVTNNSTSTQNFFFFQQPAVYSGGPKVYTNSLYSQTLLPYATSGSVLSFTMIL
CCEEEEEEEECCCCCCCEEEEEECCCEECCCCCEEECCHHHHHHCCEECCCCHHHHHHHH
QYYAGVQQQVDPPQIGQPSGQLGAIQPIELTPASGGTPTKNTTNMTVDPSLGLSVPVSTD
HHHHCHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCEEEEECCC
GPQAGSFRIVTPVYDPVLMNYSAGSAVQSLTGAITLSNFVTAQPNTNLDCQPIIKFYVQT
CCCCCCEEEECCCCCCEEEECCCCHHHHHHHHEEEEEEEEEECCCCCCCHHHEEEEEEEC
GTYTAGTVMNFTSSSVGAALCDATPGFTTFNVSYNPNGTWTVKNMALSQLANGSRGLLEK
CCEECCEEEEECCCCCCEEEECCCCCCEEEEEEECCCCCEEEHHHHHHHHCCCCCCCEEC
SSFTTELNATAQIAEVLNEAGTAVVSTGLAANFLRPVTVTNLTAPGAIIRNRDYQVGPVG
CCCCEECCCHHHHHHHHHHCCCEEEECCHHHHHCCCEEEEECCCCCCEEECCCEEECCCC
GRYQGLTCTDVAGNTAVFD
CCCCCEEEECCCCCCEECC
>Mature Secondary Structure 
ATKITINVTNNSTSTQNFFFFQQPAVYSGGPKVYTNSLYSQTLLPYATSGSVLSFTMIL
CEEEEEEEECCCCCCCEEEEEECCCEECCCCCEEECCHHHHHHCCEECCCCHHHHHHHH
QYYAGVQQQVDPPQIGQPSGQLGAIQPIELTPASGGTPTKNTTNMTVDPSLGLSVPVSTD
HHHHCHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCEEEEECCC
GPQAGSFRIVTPVYDPVLMNYSAGSAVQSLTGAITLSNFVTAQPNTNLDCQPIIKFYVQT
CCCCCCEEEECCCCCCEEEECCCCHHHHHHHHEEEEEEEEEECCCCCCCHHHEEEEEEEC
GTYTAGTVMNFTSSSVGAALCDATPGFTTFNVSYNPNGTWTVKNMALSQLANGSRGLLEK
CCEECCEEEEECCCCCCEEEECCCCCCEEEEEEECCCCCEEEHHHHHHHHCCCCCCCEEC
SSFTTELNATAQIAEVLNEAGTAVVSTGLAANFLRPVTVTNLTAPGAIIRNRDYQVGPVG
CCCCEECCCHHHHHHHHHHCCCEEEECCHHHHHCCCEEEEECCCCCCEEECCCEEECCCC
GRYQGLTCTDVAGNTAVFD
CCCCCEEEECCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA