Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192291500

Identifier: 192291500

GI number: 192291500

Start: 3371068

End: 3371535

Strand: Reverse

Name: 192291500

Synonym: Rpal_3124

Alternate gene names: NA

Gene position: 3371535-3371068 (Counterclockwise)

Preceding gene: 192291501

Following gene: 192291499

Centisome position: 58.7

GC content: 63.03

Gene sequence:

>468_bases
ATGCGAAAAGCAATCACATCCCTGGCGACCGCTGCCTTGCTAATCGGATCGGCGACCGTCGGCCCCGCAATTGCCCGCGA
TCGCTCTGACCGCGCCGACCGTGTGGAATTGACCACAAGCCAACTCACCGATCAGGCGGTTGCCCGCGCAGCTCAGCTCA
AAGCTGACCTTCGTCTCACGCCGGAGCAGGACAAGAACTGGGCGGGCGTCCAGGGCGCGCTGGTCGACGTCTGGAGGAAG
CGGGCCGAAGAGCGCCAATCCTGGCGGAACGCGCGCGCCAATGCGACAGGCAGCACCGATCTGATCGAGCAGATGCGCAA
GACTGGCGACGATCAGATCGAACGCGGCAATAATCTGAAGAAGCTCGCCGATGCGGCTCAGCCGCTGTACGCATCACTCG
ACGATCAGCAGAAGCGGCGCTTCACCGAGGCGTTGTTTCAACGGCATCGCGATCGCCGCTCGGATTGA

Upstream 100 bases:

>100_bases
GAAAGCTCTGATCGCAGATCCGCGCGACATCTCTCGTCGCTTCCCGAGACTACGGCAGGCACTCAACGATACAAGCTCAA
CTCCAAAAAAGGAACGCGCT

Downstream 100 bases:

>100_bases
GCTAAAGATCGCTCGAGCAGTTTCGCAATAGCGGGCGTCCTCTGGATGGCCCGCTATTCGTCCTTTTTGATGCGGCGATC
GAGGCGAAACATGCAGACCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MRKAITSLATAALLIGSATVGPAIARDRSDRADRVELTTSQLTDQAVARAAQLKADLRLTPEQDKNWAGVQGALVDVWRK
RAEERQSWRNARANATGSTDLIEQMRKTGDDQIERGNNLKKLADAAQPLYASLDDQQKRRFTEALFQRHRDRRSD

Sequences:

>Translated_155_residues
MRKAITSLATAALLIGSATVGPAIARDRSDRADRVELTTSQLTDQAVARAAQLKADLRLTPEQDKNWAGVQGALVDVWRK
RAEERQSWRNARANATGSTDLIEQMRKTGDDQIERGNNLKKLADAAQPLYASLDDQQKRRFTEALFQRHRDRRSD
>Mature_155_residues
MRKAITSLATAALLIGSATVGPAIARDRSDRADRVELTTSQLTDQAVARAAQLKADLRLTPEQDKNWAGVQGALVDVWRK
RAEERQSWRNARANATGSTDLIEQMRKTGDDQIERGNNLKKLADAAQPLYASLDDQQKRRFTEALFQRHRDRRSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17385; Mature: 17385

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKAITSLATAALLIGSATVGPAIARDRSDRADRVELTTSQLTDQAVARAAQLKADLRLT
CHHHHHHHHHHHHHHHCHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PEQDKNWAGVQGALVDVWRKRAEERQSWRNARANATGSTDLIEQMRKTGDDQIERGNNLK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHCCCCHH
KLADAAQPLYASLDDQQKRRFTEALFQRHRDRRSD
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRKAITSLATAALLIGSATVGPAIARDRSDRADRVELTTSQLTDQAVARAAQLKADLRLT
CHHHHHHHHHHHHHHHCHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PEQDKNWAGVQGALVDVWRKRAEERQSWRNARANATGSTDLIEQMRKTGDDQIERGNNLK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHCCCCHH
KLADAAQPLYASLDDQQKRRFTEALFQRHRDRRSD
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA