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The map label for this gene is 192291466

Identifier: 192291466

GI number: 192291466

Start: 3333423

End: 3334565

Strand: Reverse

Name: 192291466

Synonym: Rpal_3090

Alternate gene names: NA

Gene position: 3334565-3333423 (Counterclockwise)

Preceding gene: 192291468

Following gene: 192291465

Centisome position: 58.05

GC content: 68.24

Gene sequence:

>1143_bases
ATGACCCCAGCCACGCAGGATCAGCCGCTGCGGATCGTTCATGCGGTGCGCGCTCCGGTCGGCGGCATCATCCGCCACAT
CCTCGATCTCGCCAACGGTCAGGCCGACCGGGGCCATCACGTCGCGCTGATCACCGACAGCCTCACCGGCGGCGACCGCG
CCGTAGCGGCGCTCGACGAGATCGCCCCGAAGATGAAGCTCGGCGTCTATCGCCTGCCGATCCGGCGCGAGCCAAGCATC
ACGGATCTGTTCGTCTGGGGCCGCTTCGTCCGCCTGATCGCGACGCTGAGGCCGGACGTGCTGCACGGCCACGGCGCCAA
GGCCGGCATCTTCATGCGCGTCGTGCCGCGGCCGACCGGATCGATCCGGGTCTACACGCCGCATGGCGGCTCGCTGCACT
ACCCGACCACGACGTTCAAAGGGCAGCTCTACAGCCGGCTCGAGCGGCTCTCGATGAACCGCACCGAACTATTCCTGTTC
GAGAGCCAATTTGCGCGCTCAACCTATGAGCGCATGATCGGCAAGCCCGAGGGCCTGGTCCGCTGCGTGTTCAACGGCGT
CACCGCCGGGGAATTCGATCCGGTTTCGCTGGCCGCTGAAGCCAGCGACGTCTGCTATGTCGGCGAGTTCCGCCACATCA
AGGGCGCCGACCTGCTGATCGACGCGATCGCACGGCTGCGGGCCGAGGGCCGTTCGGTGACGCTGACGCTCGGCGGCGAC
GGCGAAGAGACCGCCGCGTTGAAAGCGCAGGTCGCGCGGCTCGATCTCGGCGGCGCGGTGCGCTTCATCGGCCACGTCAA
AGCCCGTCATGGTTTCGCGCAAGGCCGCCTGCTGGTGGTGCCGTCGCGCGGCGATTCCATGCCGTATGTGGTGATCGAAG
CCGCCGCGGCCGGTGTGCCGATGGTCGCCGCCAATGTCGGCGGCATCCCGGAGATCTTCGGCCCGGACCATCGCGACGCG
TTGTTCGCACCCAGCGATCCGGCCGCGATGGCCAAGGCGATCGCTGCCGCGCTCGACGACCTGAACGCCGCCCGCGACCG
GGCCAAGCGGCTGCGCGAGCGGATCTTTCTGCACTTCTCGCAAAAGGCGATGGTCGAAGGCGTGCTTGCCGGCTACCGCG
AGGCCTTAGCGAAGCAGCGCTGA

Upstream 100 bases:

>100_bases
CGGATCAATCCATGCCCCGCGCCGCCATTTTGACTGGCTTCTGTCCCGCTGCGCGCTGTCGCGGCGGTTGGCACAGCGTG
CCGTGTGCACTGGCGATCCG

Downstream 100 bases:

>100_bases
GCGTCGGCGGTCGCCGCTAACCGTTTCTTGCGACTTTTCCGTTAATGCCCGGACTGGGGGAGTTCGCCGGACGACAAAGT
CGTGCCGGCGCAACAGACGG

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MTPATQDQPLRIVHAVRAPVGGIIRHILDLANGQADRGHHVALITDSLTGGDRAVAALDEIAPKMKLGVYRLPIRREPSI
TDLFVWGRFVRLIATLRPDVLHGHGAKAGIFMRVVPRPTGSIRVYTPHGGSLHYPTTTFKGQLYSRLERLSMNRTELFLF
ESQFARSTYERMIGKPEGLVRCVFNGVTAGEFDPVSLAAEASDVCYVGEFRHIKGADLLIDAIARLRAEGRSVTLTLGGD
GEETAALKAQVARLDLGGAVRFIGHVKARHGFAQGRLLVVPSRGDSMPYVVIEAAAAGVPMVAANVGGIPEIFGPDHRDA
LFAPSDPAAMAKAIAAALDDLNAARDRAKRLRERIFLHFSQKAMVEGVLAGYREALAKQR

Sequences:

>Translated_380_residues
MTPATQDQPLRIVHAVRAPVGGIIRHILDLANGQADRGHHVALITDSLTGGDRAVAALDEIAPKMKLGVYRLPIRREPSI
TDLFVWGRFVRLIATLRPDVLHGHGAKAGIFMRVVPRPTGSIRVYTPHGGSLHYPTTTFKGQLYSRLERLSMNRTELFLF
ESQFARSTYERMIGKPEGLVRCVFNGVTAGEFDPVSLAAEASDVCYVGEFRHIKGADLLIDAIARLRAEGRSVTLTLGGD
GEETAALKAQVARLDLGGAVRFIGHVKARHGFAQGRLLVVPSRGDSMPYVVIEAAAAGVPMVAANVGGIPEIFGPDHRDA
LFAPSDPAAMAKAIAAALDDLNAARDRAKRLRERIFLHFSQKAMVEGVLAGYREALAKQR
>Mature_379_residues
TPATQDQPLRIVHAVRAPVGGIIRHILDLANGQADRGHHVALITDSLTGGDRAVAALDEIAPKMKLGVYRLPIRREPSIT
DLFVWGRFVRLIATLRPDVLHGHGAKAGIFMRVVPRPTGSIRVYTPHGGSLHYPTTTFKGQLYSRLERLSMNRTELFLFE
SQFARSTYERMIGKPEGLVRCVFNGVTAGEFDPVSLAAEASDVCYVGEFRHIKGADLLIDAIARLRAEGRSVTLTLGGDG
EETAALKAQVARLDLGGAVRFIGHVKARHGFAQGRLLVVPSRGDSMPYVVIEAAAAGVPMVAANVGGIPEIFGPDHRDAL
FAPSDPAAMAKAIAAALDDLNAARDRAKRLRERIFLHFSQKAMVEGVLAGYREALAKQR

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Homo sapiens, GI11863130, Length=317, Percent_Identity=26.1829652996845, Blast_Score=75, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 41156; Mature: 41025

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPATQDQPLRIVHAVRAPVGGIIRHILDLANGQADRGHHVALITDSLTGGDRAVAALDE
CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHH
IAPKMKLGVYRLPIRREPSITDLFVWGRFVRLIATLRPDVLHGHGAKAGIFMRVVPRPTG
HCHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHEECCCCCCEEEEEEECCCCC
SIRVYTPHGGSLHYPTTTFKGQLYSRLERLSMNRTELFLFESQFARSTYERMIGKPEGLV
CEEEECCCCCEECCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHCCCCHHH
RCVFNGVTAGEFDPVSLAAEASDVCYVGEFRHIKGADLLIDAIARLRAEGRSVTLTLGGD
HHHHCCCCCCCCCCCEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCC
GEETAALKAQVARLDLGGAVRFIGHVKARHGFAQGRLLVVPSRGDSMPYVVIEAAAAGVP
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCCC
MVAANVGGIPEIFGPDHRDALFAPSDPAAMAKAIAAALDDLNAARDRAKRLRERIFLHFS
EEEECCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QKAMVEGVLAGYREALAKQR
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TPATQDQPLRIVHAVRAPVGGIIRHILDLANGQADRGHHVALITDSLTGGDRAVAALDE
CCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHH
IAPKMKLGVYRLPIRREPSITDLFVWGRFVRLIATLRPDVLHGHGAKAGIFMRVVPRPTG
HCHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHEECCCCCCEEEEEEECCCCC
SIRVYTPHGGSLHYPTTTFKGQLYSRLERLSMNRTELFLFESQFARSTYERMIGKPEGLV
CEEEECCCCCEECCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHCCCCHHH
RCVFNGVTAGEFDPVSLAAEASDVCYVGEFRHIKGADLLIDAIARLRAEGRSVTLTLGGD
HHHHCCCCCCCCCCCEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCC
GEETAALKAQVARLDLGGAVRFIGHVKARHGFAQGRLLVVPSRGDSMPYVVIEAAAAGVP
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCCC
MVAANVGGIPEIFGPDHRDALFAPSDPAAMAKAIAAALDDLNAARDRAKRLRERIFLHFS
EEEECCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QKAMVEGVLAGYREALAKQR
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]