| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192291468
Identifier: 192291468
GI number: 192291468
Start: 3337268
End: 3338461
Strand: Reverse
Name: 192291468
Synonym: Rpal_3092
Alternate gene names: NA
Gene position: 3338461-3337268 (Counterclockwise)
Preceding gene: 192291470
Following gene: 192291466
Centisome position: 58.12
GC content: 64.82
Gene sequence:
>1194_bases ATGACGATGATGGCCGAGCTGATCGAGGCCCGGACCGCCGATCGCATGGCGGCCGCGCAGAGCCGGATCGCCCACGTCGA GATCATCACCGACATCGACGCCGCCGAACCGATCTGGCGCGCGCTCGAGCAGACCGGCCAGCATTCTTCGCCCTATCAGC GGTTCGATTTCCTCAGTGCCTGGCAGTATCATGTCGGCCGCGCCGAGGGGCGACAGCCGTTCATCGTGGTTGCGCGCGAC GTCGAGCGCCGGCCGTTATTGCTGTTGCCGCTGGGTCTCGAACGTAAATTCGGCGTCCGCGTGGCCGGATTCCTCGGCGG CAAACACGCGACCTTCAACATGCCGTTATGGCGGCGTGATTTCGCTGCGAACGCGGGCGACGCCGACATCGCCGAGTTGA TCAGGCGAGTGCGGAACATCGGCGGAGCCGATCTGCTCGCATTCGAACAGCAGCCGGCACGCTGGAACGATCTCGCCAAT CCGTTGGCCCGCCTTCCCCATCAGCCCTCGGTCAACGATTGCCCGGTGCTGGTGTTGCCGCCGTGCGCTGCGCTGAACGA CCTGATCAGCAATTCGATGCGCCGCCGGCTCAAGGGCAAGGAACGCAAGCTGCAGGAGCTGGCCGGCTATCGCTACGGCC AGGCTCGCACCCAAGCGGATGTCGACCGCCTGCTCGAAGCGTTCTTCCGGATCAAGCCGGTGCGGATGGCGGCGCAGAAT CTGCCAAACGTATTCGCCGAACCCGGCGTCGCCGATTTCATCCGCCAGGCCTGCTCTACGGAGCTGAGCGGCGGCGGCCA TGCGATCGAAATCCACGCGCTGGAATGCGACGACGAGATGATCGCGATGTATGCCGGCGTCGCCGACGGCAGCCGCTATT CGATGATGTTCAACACCTACACACTGTCGGACGCGGCGCGCTACAGCCCCGGCCTGATCCTGATGCGCCATATCATCGAT CACTACGCCGGCCTCGGCTATCGCTGGATCGACCTCGGCATCGGCTCGGACGACTACAAGAAGATATTCTGCAAGGATCT CGAGCCGATCTTCGACAGCTTCGTTCCGCTGACCCCGCGCGGACAGATCGCGGCGGCCGCGATGTCGGCGATCGGCCGTG GCAAACGCGCGGTCAAGCAGAGTCCGGCGATGATGCAGGCGGTGCAACGCCTGCGCGGCATGCTGCCACGCTGA
Upstream 100 bases:
>100_bases AGCGGTTTCGCGGGTCATCATTACGCTTTGTTGAGATTTGTTTGTAAAGGTCCGCAACGTTGCGCCACTCGCGCGTTATC TGTTCTCATTGGATCGCCGG
Downstream 100 bases:
>100_bases GATCGGAGTGACTTCCGATTACCCGACCGTCAACGCCCGGGGCCCGCCCGGGCGTTTCTGTTTGATGTGTTATTCGACCC TACGCCGCTGCGGAGCGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Protein Involved In Cellulose Biosynthesis-Like Protein
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MTMMAELIEARTADRMAAAQSRIAHVEIITDIDAAEPIWRALEQTGQHSSPYQRFDFLSAWQYHVGRAEGRQPFIVVARD VERRPLLLLPLGLERKFGVRVAGFLGGKHATFNMPLWRRDFAANAGDADIAELIRRVRNIGGADLLAFEQQPARWNDLAN PLARLPHQPSVNDCPVLVLPPCAALNDLISNSMRRRLKGKERKLQELAGYRYGQARTQADVDRLLEAFFRIKPVRMAAQN LPNVFAEPGVADFIRQACSTELSGGGHAIEIHALECDDEMIAMYAGVADGSRYSMMFNTYTLSDAARYSPGLILMRHIID HYAGLGYRWIDLGIGSDDYKKIFCKDLEPIFDSFVPLTPRGQIAAAAMSAIGRGKRAVKQSPAMMQAVQRLRGMLPR
Sequences:
>Translated_397_residues MTMMAELIEARTADRMAAAQSRIAHVEIITDIDAAEPIWRALEQTGQHSSPYQRFDFLSAWQYHVGRAEGRQPFIVVARD VERRPLLLLPLGLERKFGVRVAGFLGGKHATFNMPLWRRDFAANAGDADIAELIRRVRNIGGADLLAFEQQPARWNDLAN PLARLPHQPSVNDCPVLVLPPCAALNDLISNSMRRRLKGKERKLQELAGYRYGQARTQADVDRLLEAFFRIKPVRMAAQN LPNVFAEPGVADFIRQACSTELSGGGHAIEIHALECDDEMIAMYAGVADGSRYSMMFNTYTLSDAARYSPGLILMRHIID HYAGLGYRWIDLGIGSDDYKKIFCKDLEPIFDSFVPLTPRGQIAAAAMSAIGRGKRAVKQSPAMMQAVQRLRGMLPR >Mature_396_residues TMMAELIEARTADRMAAAQSRIAHVEIITDIDAAEPIWRALEQTGQHSSPYQRFDFLSAWQYHVGRAEGRQPFIVVARDV ERRPLLLLPLGLERKFGVRVAGFLGGKHATFNMPLWRRDFAANAGDADIAELIRRVRNIGGADLLAFEQQPARWNDLANP LARLPHQPSVNDCPVLVLPPCAALNDLISNSMRRRLKGKERKLQELAGYRYGQARTQADVDRLLEAFFRIKPVRMAAQNL PNVFAEPGVADFIRQACSTELSGGGHAIEIHALECDDEMIAMYAGVADGSRYSMMFNTYTLSDAARYSPGLILMRHIIDH YAGLGYRWIDLGIGSDDYKKIFCKDLEPIFDSFVPLTPRGQIAAAAMSAIGRGKRAVKQSPAMMQAVQRLRGMLPR
Specific function: Unknown
COG id: COG5653
COG function: function code M; Protein involved in cellulose biosynthesis (CelD)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44333; Mature: 44202
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMMAELIEARTADRMAAAQSRIAHVEIITDIDAAEPIWRALEQTGQHSSPYQRFDFLSA CCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHH WQYHVGRAEGRQPFIVVARDVERRPLLLLPLGLERKFGVRVAGFLGGKHATFNMPLWRRD HHHHHCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCEEEEEECCCCEEECCCHHHHH FAANAGDADIAELIRRVRNIGGADLLAFEQQPARWNDLANPLARLPHQPSVNDCPVLVLP HCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEC PCAALNDLISNSMRRRLKGKERKLQELAGYRYGQARTQADVDRLLEAFFRIKPVRMAAQN CHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH LPNVFAEPGVADFIRQACSTELSGGGHAIEIHALECDDEMIAMYAGVADGSRYSMMFNTY CCHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHCCCCCCEEEEEEEEE TLSDAARYSPGLILMRHIIDHYAGLGYRWIDLGIGSDDYKKIFCKDLEPIFDSFVPLTPR EECCHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCC GQIAAAAMSAIGRGKRAVKQSPAMMQAVQRLRGMLPR CHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCCC >Mature Secondary Structure TMMAELIEARTADRMAAAQSRIAHVEIITDIDAAEPIWRALEQTGQHSSPYQRFDFLSA CHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHH WQYHVGRAEGRQPFIVVARDVERRPLLLLPLGLERKFGVRVAGFLGGKHATFNMPLWRRD HHHHHCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCEEEEEECCCCEEECCCHHHHH FAANAGDADIAELIRRVRNIGGADLLAFEQQPARWNDLANPLARLPHQPSVNDCPVLVLP HCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEC PCAALNDLISNSMRRRLKGKERKLQELAGYRYGQARTQADVDRLLEAFFRIKPVRMAAQN CHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH LPNVFAEPGVADFIRQACSTELSGGGHAIEIHALECDDEMIAMYAGVADGSRYSMMFNTY CCHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHCCCCCCEEEEEEEEE TLSDAARYSPGLILMRHIIDHYAGLGYRWIDLGIGSDDYKKIFCKDLEPIFDSFVPLTPR EECCHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCC GQIAAAAMSAIGRGKRAVKQSPAMMQAVQRLRGMLPR CHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA