Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192291073

Identifier: 192291073

GI number: 192291073

Start: 2922611

End: 2924341

Strand: Reverse

Name: 192291073

Synonym: Rpal_2694

Alternate gene names: NA

Gene position: 2924341-2922611 (Counterclockwise)

Preceding gene: 192291074

Following gene: 192291069

Centisome position: 50.91

GC content: 52.34

Gene sequence:

>1731_bases
ATGTCCGAAGATGCTTGGTACTACGTCAACTCAGGAGAACGATTCGGTCCGGTCAGCTTGGCGAACCTAAAGAGACTGAT
TTCCTCGCTTCCCAACCCCGAAAGGTGCTTGGTTTGGTCTGCAAAGCTCCCGGACTGGACTGCAGCCGGAGACATCAACG
AACTCCAGCCTTTGACGCCCCCACCTATTCCTAACGAACCGCAGGAGCCCCCCCGCCCCGAATGGCGAGTTCGTTGGTGG
TGGTACGTTGTCGCCCTTTTCTGTCTTGGCTCGATTGGAAGCCAAGACGGACGAACGGCGATGCAATGGGCATCGCGAAA
TCGTGCTGAGCGCCGCAGGATCAGATACGGCAATTCGGTGGTCGACGACAAGAGGCCGAATGTCGCAACTGCGGCCCCAT
TACCATCAAGCAACTACATCACGCGTCACTGGCGAGGCGACCTATCACTTCCAGTTTCGTATTGGGTGAATGGATTCCTA
GGAAATATCGCTACAGCCGGCGCAATCATCTTTCTCGGCAAAGGCCTCGATTTCAAAGATGAATTTCGCCCTGAAATAGC
GCTTGCGAGTGCGACCGCCATTTGGGCCACGATAGTTCTTGTAGCGACCTGGCAGGTTGTCGGCGTTTGGCGTTCAGCAA
CTCACTACTCAGAACAACATGTTCGGAGCTATTGGGGCGGTATTGCAAAGTTCGTAGTGTTCCTCGCTGCCCTAAAGCTC
GGTGGCCAGATCCTAACAAATGCGATCCCTCAAATTACTGAATTTGCTAGAATCTATGCCGGAGACGCTAGCGTAGGAAA
ATACAAATTCCACGTTATCAACGACGGCCGAGAACTTGAATTAGTAGGGGGCATCACATTTGGAGCTGCCAAAGATCTCG
AATCCTTTGCAGACGCTCTGAGCTCCCTCAAAACAGTTCGATTGACCTCGAATGGAGGGCGGATCTCCGAAGCAGCGCGA
ATCGCGGCGCAGATTAGAAAGAGAGGTCTGAACACCTACGTTCCGACCTATTGCGTATCGGCCTGCACTATTGCCTTCCT
AGGCGGCCAACAACGGCTGGTTGGAACAAGCGCAAAGCTGGGATTCCACCAGCCTGATTTCCCAGGGATATCAGCAGTAG
ATCGGAGGGAATTGATCGCGGAAGAGGAGCGTAGATTAACCTCATTGGGGGTTAGTCCAGCTTTCGCTCGAAAAGTGAAT
TCCACGCCTCCAAGCAACATGTGGTTTCCGACTCTTTCAGAGCTCAAGTCAGGGGGCCTCGTCACGAAGACCTTGGACAT
AGATGACAGTCCGGTTTCTTACGAGGCCTTTGTGACCCGGGAAGGTAAGTTTTCTATCGATTTCGGTGGCGTGCCTAAAT
TGACCAAAGGCACAGGCCGGCCGGCTAATGGTGTCTCATACGACTCCTACACTTGGTCAACGGGTGGAACGACCGTATAC
AAAGCGGTTGTGATGTTCGTCTATTCTGAGAGCATCAAAGTTAGCTTTGATGGCGCTATAGCTGGCGCTGCACAAAACGC
AAAAGCCCAACTGGTCAAAGAGCAGCCAGTGAAACTGGCCGATTTCGAGGGTCGAGAAGCTTTCCTGGAAACGCAAGACT
CGATGGAAATTAGGTTGAGATACTTTTTTATCGGTGGCCGCCTATACCAACTAATGGTAGTCGCCCATTTGGGGGAAACC
ACAACGCCAGCAGCCAATGCGTTCTTTGACTCGTTTCATTTCACATTCTGA

Upstream 100 bases:

>100_bases
GTTTGAGCAGCCGTCCTCATCGACCGGTCTTTTCCCTTGAACCGGCAGGAACCTTGGTTGAATTTCGGCGGAGATGCAAT
TGACTGCGCGGGGGCGCGGA

Downstream 100 bases:

>100_bases
TTACGGCATCGGGATCGATAGCTTGCTTTCAGACAAGCGCACGTAGGTCTATAGGGGGCTCTACGGATCCGTTTCAATTG
CAGCGAGACTACCCTGACCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 576; Mature: 575

Protein sequence:

>576_residues
MSEDAWYYVNSGERFGPVSLANLKRLISSLPNPERCLVWSAKLPDWTAAGDINELQPLTPPPIPNEPQEPPRPEWRVRWW
WYVVALFCLGSIGSQDGRTAMQWASRNRAERRRIRYGNSVVDDKRPNVATAAPLPSSNYITRHWRGDLSLPVSYWVNGFL
GNIATAGAIIFLGKGLDFKDEFRPEIALASATAIWATIVLVATWQVVGVWRSATHYSEQHVRSYWGGIAKFVVFLAALKL
GGQILTNAIPQITEFARIYAGDASVGKYKFHVINDGRELELVGGITFGAAKDLESFADALSSLKTVRLTSNGGRISEAAR
IAAQIRKRGLNTYVPTYCVSACTIAFLGGQQRLVGTSAKLGFHQPDFPGISAVDRRELIAEEERRLTSLGVSPAFARKVN
STPPSNMWFPTLSELKSGGLVTKTLDIDDSPVSYEAFVTREGKFSIDFGGVPKLTKGTGRPANGVSYDSYTWSTGGTTVY
KAVVMFVYSESIKVSFDGAIAGAAQNAKAQLVKEQPVKLADFEGREAFLETQDSMEIRLRYFFIGGRLYQLMVVAHLGET
TTPAANAFFDSFHFTF

Sequences:

>Translated_576_residues
MSEDAWYYVNSGERFGPVSLANLKRLISSLPNPERCLVWSAKLPDWTAAGDINELQPLTPPPIPNEPQEPPRPEWRVRWW
WYVVALFCLGSIGSQDGRTAMQWASRNRAERRRIRYGNSVVDDKRPNVATAAPLPSSNYITRHWRGDLSLPVSYWVNGFL
GNIATAGAIIFLGKGLDFKDEFRPEIALASATAIWATIVLVATWQVVGVWRSATHYSEQHVRSYWGGIAKFVVFLAALKL
GGQILTNAIPQITEFARIYAGDASVGKYKFHVINDGRELELVGGITFGAAKDLESFADALSSLKTVRLTSNGGRISEAAR
IAAQIRKRGLNTYVPTYCVSACTIAFLGGQQRLVGTSAKLGFHQPDFPGISAVDRRELIAEEERRLTSLGVSPAFARKVN
STPPSNMWFPTLSELKSGGLVTKTLDIDDSPVSYEAFVTREGKFSIDFGGVPKLTKGTGRPANGVSYDSYTWSTGGTTVY
KAVVMFVYSESIKVSFDGAIAGAAQNAKAQLVKEQPVKLADFEGREAFLETQDSMEIRLRYFFIGGRLYQLMVVAHLGET
TTPAANAFFDSFHFTF
>Mature_575_residues
SEDAWYYVNSGERFGPVSLANLKRLISSLPNPERCLVWSAKLPDWTAAGDINELQPLTPPPIPNEPQEPPRPEWRVRWWW
YVVALFCLGSIGSQDGRTAMQWASRNRAERRRIRYGNSVVDDKRPNVATAAPLPSSNYITRHWRGDLSLPVSYWVNGFLG
NIATAGAIIFLGKGLDFKDEFRPEIALASATAIWATIVLVATWQVVGVWRSATHYSEQHVRSYWGGIAKFVVFLAALKLG
GQILTNAIPQITEFARIYAGDASVGKYKFHVINDGRELELVGGITFGAAKDLESFADALSSLKTVRLTSNGGRISEAARI
AAQIRKRGLNTYVPTYCVSACTIAFLGGQQRLVGTSAKLGFHQPDFPGISAVDRRELIAEEERRLTSLGVSPAFARKVNS
TPPSNMWFPTLSELKSGGLVTKTLDIDDSPVSYEAFVTREGKFSIDFGGVPKLTKGTGRPANGVSYDSYTWSTGGTTVYK
AVVMFVYSESIKVSFDGAIAGAAQNAKAQLVKEQPVKLADFEGREAFLETQDSMEIRLRYFFIGGRLYQLMVVAHLGETT
TPAANAFFDSFHFTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63488; Mature: 63357

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEDAWYYVNSGERFGPVSLANLKRLISSLPNPERCLVWSAKLPDWTAAGDINELQPLTP
CCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
PPIPNEPQEPPRPEWRVRWWWYVVALFCLGSIGSQDGRTAMQWASRNRAERRRIRYGNSV
CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHCCCCC
VDDKRPNVATAAPLPSSNYITRHWRGDLSLPVSYWVNGFLGNIATAGAIIFLGKGLDFKD
CCCCCCCCEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHH
EFRPEIALASATAIWATIVLVATWQVVGVWRSATHYSEQHVRSYWGGIAKFVVFLAALKL
HCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGQILTNAIPQITEFARIYAGDASVGKYKFHVINDGRELELVGGITFGAAKDLESFADAL
CHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECEECCCHHHHHHHHHHH
SSLKTVRLTSNGGRISEAARIAAQIRKRGLNTYVPTYCVSACTIAFLGGQQRLVGTSAKL
HCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCC
GFHQPDFPGISAVDRRELIAEEERRLTSLGVSPAFARKVNSTPPSNMWFPTLSELKSGGL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHHCCCC
VTKTLDIDDSPVSYEAFVTREGKFSIDFGGVPKLTKGTGRPANGVSYDSYTWSTGGTTVY
EEEEECCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHH
KAVVMFVYSESIKVSFDGAIAGAAQNAKAQLVKEQPVKLADFEGREAFLETQDSMEIRLR
HHHHHHHHCCCEEEEECCEECCCCCCHHHHHHHHCCCEEECCCCCHHHHCCCCCEEEEEE
YFFIGGRLYQLMVVAHLGETTTPAANAFFDSFHFTF
EEEECHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
SEDAWYYVNSGERFGPVSLANLKRLISSLPNPERCLVWSAKLPDWTAAGDINELQPLTP
CCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
PPIPNEPQEPPRPEWRVRWWWYVVALFCLGSIGSQDGRTAMQWASRNRAERRRIRYGNSV
CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHCCCCC
VDDKRPNVATAAPLPSSNYITRHWRGDLSLPVSYWVNGFLGNIATAGAIIFLGKGLDFKD
CCCCCCCCEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHH
EFRPEIALASATAIWATIVLVATWQVVGVWRSATHYSEQHVRSYWGGIAKFVVFLAALKL
HCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGQILTNAIPQITEFARIYAGDASVGKYKFHVINDGRELELVGGITFGAAKDLESFADAL
CHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECEECCCHHHHHHHHHHH
SSLKTVRLTSNGGRISEAARIAAQIRKRGLNTYVPTYCVSACTIAFLGGQQRLVGTSAKL
HCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCC
GFHQPDFPGISAVDRRELIAEEERRLTSLGVSPAFARKVNSTPPSNMWFPTLSELKSGGL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHHCCCC
VTKTLDIDDSPVSYEAFVTREGKFSIDFGGVPKLTKGTGRPANGVSYDSYTWSTGGTTVY
EEEEECCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHH
KAVVMFVYSESIKVSFDGAIAGAAQNAKAQLVKEQPVKLADFEGREAFLETQDSMEIRLR
HHHHHHHHCCCEEEEECCEECCCCCCHHHHHHHHCCCEEECCCCCHHHHCCCCCEEEEEE
YFFIGGRLYQLMVVAHLGETTTPAANAFFDSFHFTF
EEEECHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA