| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290965
Identifier: 192290965
GI number: 192290965
Start: 2790269
End: 2790769
Strand: Reverse
Name: 192290965
Synonym: Rpal_2582
Alternate gene names: NA
Gene position: 2790769-2790269 (Counterclockwise)
Preceding gene: 192290967
Following gene: 192290964
Centisome position: 48.59
GC content: 66.67
Gene sequence:
>501_bases ATGACGCCCGCAAACGATCACACTTATGCATTCGTCTCCGTCCTGCCGGGGCGGATTCGGTTGCGGCATCGGATGCTTCG TGATCGTGCTCGTCATGCTGCGCTTGATGCGCGATTGCGCGCTCTCGTGACGGTGGATGGCGATCCGGCCGTCGGCTCGC TCCTGCTGCAATATGATCCGGCCGACACCGAGATGGAGGCGCGCATCCGAGCCGAGGTCGCAGCGGTGTGGCCCACGATG GCACCGGTCGAGCCACAGGATCCACCAACCGCCGATGCAGAGGCTGCGACGGCCGCCAACGACCCAATCGACCGTTTGCG GCGTCGGGCGCAGACCCGGTTGGCGATCAACCGCGTCGCCAAAGTCGGCGCACTCGCCGGCATGGCCGGCACCGTCGCGG CGCTCGGCGTCAGCCGCAAACTCCACGCTCAGATGGGCATCGTCGCCATCGCGGCGACTCTCACCCACCTCGCGGTGCAT TGGCGCCGCACATTTCGTTAG
Upstream 100 bases:
>100_bases AGTGCGCGATCCGCCCTCGCCTCCCATCAATTCCACAAAACGCCTTCGTGCCGCGCCGCCCAGCAGCCCAACACGCGCAA CAGCAAGGTCTGCGTCGGCA
Downstream 100 bases:
>100_bases GCCCTCCGTGTCCGATCCTTCCGCCGCAGGCCTGCTGCGCTTCACCCGACATCTTGAGATCGCGCATCACCTGCCAGGTC GCATCCGCCTCAAACTGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTPANDHTYAFVSVLPGRIRLRHRMLRDRARHAALDARLRALVTVDGDPAVGSLLLQYDPADTEMEARIRAEVAAVWPTM APVEPQDPPTADAEAATAANDPIDRLRRRAQTRLAINRVAKVGALAGMAGTVAALGVSRKLHAQMGIVAIAATLTHLAVH WRRTFR
Sequences:
>Translated_166_residues MTPANDHTYAFVSVLPGRIRLRHRMLRDRARHAALDARLRALVTVDGDPAVGSLLLQYDPADTEMEARIRAEVAAVWPTM APVEPQDPPTADAEAATAANDPIDRLRRRAQTRLAINRVAKVGALAGMAGTVAALGVSRKLHAQMGIVAIAATLTHLAVH WRRTFR >Mature_165_residues TPANDHTYAFVSVLPGRIRLRHRMLRDRARHAALDARLRALVTVDGDPAVGSLLLQYDPADTEMEARIRAEVAAVWPTMA PVEPQDPPTADAEAATAANDPIDRLRRRAQTRLAINRVAKVGALAGMAGTVAALGVSRKLHAQMGIVAIAATLTHLAVHW RRTFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18049; Mature: 17918
Theoretical pI: Translated: 11.60; Mature: 11.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPANDHTYAFVSVLPGRIRLRHRMLRDRARHAALDARLRALVTVDGDPAVGSLLLQYDP CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHEEEEECC ADTEMEARIRAEVAAVWPTMAPVEPQDPPTADAEAATAANDPIDRLRRRAQTRLAINRVA CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHH KVGALAGMAGTVAALGVSRKLHAQMGIVAIAATLTHLAVHWRRTFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TPANDHTYAFVSVLPGRIRLRHRMLRDRARHAALDARLRALVTVDGDPAVGSLLLQYDP CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHEEEEECC ADTEMEARIRAEVAAVWPTMAPVEPQDPPTADAEAATAANDPIDRLRRRAQTRLAINRVA CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHH KVGALAGMAGTVAALGVSRKLHAQMGIVAIAATLTHLAVHWRRTFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA