| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290964
Identifier: 192290964
GI number: 192290964
Start: 2789929
End: 2790261
Strand: Reverse
Name: 192290964
Synonym: Rpal_2581
Alternate gene names: NA
Gene position: 2790261-2789929 (Counterclockwise)
Preceding gene: 192290965
Following gene: 192290963
Centisome position: 48.58
GC content: 66.07
Gene sequence:
>333_bases GTGTCCGATCCTTCCGCCGCAGGCCTGCTGCGCTTCACCCGACATCTTGAGATCGCGCATCACCTGCCAGGTCGCATCCG CCTCAAACTGAAGGTCCCGCTCGACAGCGAGATCATCGCCATGGCGGACGAGGCGAAACGCTTCGGCAAAGCGCTGGCGA AGATGGACGGCATCCGCTCGATCAGCCTGAACCCGCTCGCGCGATCCTGCGTGGTCGAATACGACCCGTCCGGAATCCCG CCCTCCGCCTGGCGCGACTTCGTCTCCGGCGACGCGACGCCGGAGGGCGAAGCGCTGCGCAATGATCTGCACGGCCTGCT GGCCGGCTTATAG
Upstream 100 bases:
>100_bases GTCAGCCGCAAACTCCACGCTCAGATGGGCATCGTCGCCATCGCGGCGACTCTCACCCACCTCGCGGTGCATTGGCGCCG CACATTTCGTTAGGCCCTCC
Downstream 100 bases:
>100_bases TTTGGAAGGATTTCATCATGCTGCCACTTCTGAGATTTGCGTCTGGTATCCTCGTCGGCGTCGTCGGCGTGCACCTGCTG AAGCAGGCCAAAGCGCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MSDPSAAGLLRFTRHLEIAHHLPGRIRLKLKVPLDSEIIAMADEAKRFGKALAKMDGIRSISLNPLARSCVVEYDPSGIP PSAWRDFVSGDATPEGEALRNDLHGLLAGL
Sequences:
>Translated_110_residues MSDPSAAGLLRFTRHLEIAHHLPGRIRLKLKVPLDSEIIAMADEAKRFGKALAKMDGIRSISLNPLARSCVVEYDPSGIP PSAWRDFVSGDATPEGEALRNDLHGLLAGL >Mature_109_residues SDPSAAGLLRFTRHLEIAHHLPGRIRLKLKVPLDSEIIAMADEAKRFGKALAKMDGIRSISLNPLARSCVVEYDPSGIPP SAWRDFVSGDATPEGEALRNDLHGLLAGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11911; Mature: 11780
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPSAAGLLRFTRHLEIAHHLPGRIRLKLKVPLDSEIIAMADEAKRFGKALAKMDGIRS CCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCC ISLNPLARSCVVEYDPSGIPPSAWRDFVSGDATPEGEALRNDLHGLLAGL CCCCCHHHHHEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SDPSAAGLLRFTRHLEIAHHLPGRIRLKLKVPLDSEIIAMADEAKRFGKALAKMDGIRS CCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCC ISLNPLARSCVVEYDPSGIPPSAWRDFVSGDATPEGEALRNDLHGLLAGL CCCCCHHHHHEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA