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The map label for this gene is 192290375

Identifier: 192290375

GI number: 192290375

Start: 2142973

End: 2143422

Strand: Reverse

Name: 192290375

Synonym: Rpal_1982

Alternate gene names: NA

Gene position: 2143422-2142973 (Counterclockwise)

Preceding gene: 192290376

Following gene: 192290372

Centisome position: 37.32

GC content: 67.33

Gene sequence:

>450_bases
ATGACGACCGATCCCGATCCGAACCACACCGCCGCGACCGTCGGCATTCCTGACGGCTTCGTGCGCCACGCCCGTTCGAG
CCCCCTCACCGCGCCGTGGGAGCCGCTCTACGCGAAGACCACCGCGGACGCGGTGATGCTCGGCTTGCGGATTCGCGAGT
GCCACACCAATTCGCGTGGCCTCGCTCATGGCGGGCTGATCACCGCGCTGGCCGACAACGCGATGGGCTATAGTTGCGGC
CTCAAGCTCGGCGGCGGCGGGCGGCTGCTGACGTCGTCACTGGCCATCGACTTCATCGGTCCGGCCAAGATCGGCCAATG
GCTGCAGATCGAGCCGGAGGTGATCAAGCTTGGCGCCAAGCTGTGCGTCGCGCAGTGCTTTGTCACCGCCGGCGGTACTC
GCTGCGCCCGCGCCAACGGTACGTTCAGCGTGGTGAAGGCGAAGGAGTGA

Upstream 100 bases:

>100_bases
AACACCGTCTCAAACCGCGCTTCAAACTTTGTCGGCGTTGCCGGCGATGCTGCGGTGCGGTCTAAAGGTTGTCAGTGCAG
CGAGGCGAGCGACGACGCGC

Downstream 100 bases:

>100_bases
GTTAGCGGCTCATGGCCGTCTAGCACCGTCGTTCCGGGGCGCGCGGAGCGCGAACCCGGAACCCCGAGCTGTTCTGCGGC
GTCAGCTTGCGTCACAACCT

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MTTDPDPNHTAATVGIPDGFVRHARSSPLTAPWEPLYAKTTADAVMLGLRIRECHTNSRGLAHGGLITALADNAMGYSCG
LKLGGGGRLLTSSLAIDFIGPAKIGQWLQIEPEVIKLGAKLCVAQCFVTAGGTRCARANGTFSVVKAKE

Sequences:

>Translated_149_residues
MTTDPDPNHTAATVGIPDGFVRHARSSPLTAPWEPLYAKTTADAVMLGLRIRECHTNSRGLAHGGLITALADNAMGYSCG
LKLGGGGRLLTSSLAIDFIGPAKIGQWLQIEPEVIKLGAKLCVAQCFVTAGGTRCARANGTFSVVKAKE
>Mature_148_residues
TTDPDPNHTAATVGIPDGFVRHARSSPLTAPWEPLYAKTTADAVMLGLRIRECHTNSRGLAHGGLITALADNAMGYSCGL
KLGGGGRLLTSSLAIDFIGPAKIGQWLQIEPEVIKLGAKLCVAQCFVTAGGTRCARANGTFSVVKAKE

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase PaaI family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003736
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 15561; Mature: 15430

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTDPDPNHTAATVGIPDGFVRHARSSPLTAPWEPLYAKTTADAVMLGLRIRECHTNSRG
CCCCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHEEHEECCCCCCC
LAHGGLITALADNAMGYSCGLKLGGGGRLLTSSLAIDFIGPAKIGQWLQIEPEVIKLGAK
CCCCCEEEEECCCCCCEECCEEECCCCEEEEEEEEEEEECCHHCCCEEEECHHHHHHHHH
LCVAQCFVTAGGTRCARANGTFSVVKAKE
HHHHHHHHHCCCCEEEECCCCEEEEEECC
>Mature Secondary Structure 
TTDPDPNHTAATVGIPDGFVRHARSSPLTAPWEPLYAKTTADAVMLGLRIRECHTNSRG
CCCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHEEHEECCCCCCC
LAHGGLITALADNAMGYSCGLKLGGGGRLLTSSLAIDFIGPAKIGQWLQIEPEVIKLGAK
CCCCCEEEEECCCCCCEECCEEECCCCEEEEEEEEEEEECCHHCCCEEEECHHHHHHHHH
LCVAQCFVTAGGTRCARANGTFSVVKAKE
HHHHHHHHHCCCCEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]