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The map label for this gene is 192290372

Identifier: 192290372

GI number: 192290372

Start: 2140061

End: 2140474

Strand: Reverse

Name: 192290372

Synonym: Rpal_1979

Alternate gene names: NA

Gene position: 2140474-2140061 (Counterclockwise)

Preceding gene: 192290375

Following gene: 192290371

Centisome position: 37.26

GC content: 64.01

Gene sequence:

>414_bases
ATGGCTGAACCCGCACGCGCACGTCCCAAGATCACTCCGGAGACCCAGCACTACTGGGACGGCGCCAAGCAAGGCGAACT
GCGGCTTCAGCGCTGCGATTCCTGCGCCCACGCGTACTTCCCGCCCCGCCCGTTCTGCCCGAAATGCGGCTCGCGCGAGG
TCAGCGTGTTCAAGGCCTCCGGCAAGGGCACCCTGTATTCCTACGTGATCAATCATCGGCCACTGGCGGCCGGCTTCACC
GAGCCCTACGCGATCGCGGTGGTCGAGCTCGAAGAGGGCCCGCGAATGATGAGCAACATCCTGGAGTGCCCGCAGACGCC
CGAGGCGCTCGAGCTCGATATGAAGCTGGAAGTCACCTTCCAGAAGATCGACGACAACCTCACCCTTCCGCAATTCCGTC
CGGCGAAGGGGTAA

Upstream 100 bases:

>100_bases
TGGCTCCGCGCCCTGCGCGTGTTGACGCTGGCGGGCCGATATCGCATCAAGACCGCACAACCGATGGGCCCACGAGCCAG
CTCAGGGAGAAAACTAAGAC

Downstream 100 bases:

>100_bases
GCACCATGCGTCGCAATCAGGTTGCTATCGTCGGCGCCGCCGAAACCACCAAGCTCGGCGTCATCCCCGATATGTCGCAG
ATCCAGCTCCACGCTGACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MAEPARARPKITPETQHYWDGAKQGELRLQRCDSCAHAYFPPRPFCPKCGSREVSVFKASGKGTLYSYVINHRPLAAGFT
EPYAIAVVELEEGPRMMSNILECPQTPEALELDMKLEVTFQKIDDNLTLPQFRPAKG

Sequences:

>Translated_137_residues
MAEPARARPKITPETQHYWDGAKQGELRLQRCDSCAHAYFPPRPFCPKCGSREVSVFKASGKGTLYSYVINHRPLAAGFT
EPYAIAVVELEEGPRMMSNILECPQTPEALELDMKLEVTFQKIDDNLTLPQFRPAKG
>Mature_136_residues
AEPARARPKITPETQHYWDGAKQGELRLQRCDSCAHAYFPPRPFCPKCGSREVSVFKASGKGTLYSYVINHRPLAAGFTE
PYAIAVVELEEGPRMMSNILECPQTPEALELDMKLEVTFQKIDDNLTLPQFRPAKG

Specific function: Unknown

COG id: COG1545

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002878
- InterPro:   IPR022002 [H]

Pfam domain/function: PF01796 DUF35; PF12172 DUF35_N [H]

EC number: NA

Molecular weight: Translated: 15398; Mature: 15267

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEPARARPKITPETQHYWDGAKQGELRLQRCDSCAHAYFPPRPFCPKCGSREVSVFKAS
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
GKGTLYSYVINHRPLAAGFTEPYAIAVVELEEGPRMMSNILECPQTPEALELDMKLEVTF
CCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCCEEECEEEEEEE
QKIDDNLTLPQFRPAKG
EECCCCCCCCCCCCCCC
>Mature Secondary Structure 
AEPARARPKITPETQHYWDGAKQGELRLQRCDSCAHAYFPPRPFCPKCGSREVSVFKAS
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
GKGTLYSYVINHRPLAAGFTEPYAIAVVELEEGPRMMSNILECPQTPEALELDMKLEVTF
CCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCCEEECEEEEEEE
QKIDDNLTLPQFRPAKG
EECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]