Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is pobA [H]

Identifier: 192290376

GI number: 192290376

Start: 2143761

End: 2144933

Strand: Reverse

Name: pobA [H]

Synonym: Rpal_1983

Alternate gene names: 192290376

Gene position: 2144933-2143761 (Counterclockwise)

Preceding gene: 192290386

Following gene: 192290375

Centisome position: 37.34

GC content: 65.98

Gene sequence:

>1173_bases
ATGCGGACACAAGTGGCCATCATCGGCGCGGGTCCGTCCGGACTGCTGCTCGGCCAGCTGCTGCACAAATACGGCATCGA
CGCCGTCATCGTGGAACGCAAGGATCCGGACTACGTGCTGTCGCGGATTCGCGCCGGCGTGCTCGAACAGGGCATGGTCG
ACCTGCTCGACGAAGCCGGCGTCTCCACCCGGTTGCACCAGGAAGCGCTGGTGCACGGCGGCTTCGAGATCGCGTTCGCC
GGTCAGCGGCACCACATCGATCTGAGGGGCGCGACCGGCGGCAAGAGCGTCACCGTGTATGGCCAGACCGAGGTCACCCG
CGACCTGATGGAAGCGCGTAGCGCCGCCGGTCTCACCACGATCTACGACGCCGCCGACGTCAGCCTGCACGACTTCGAAG
GCGCCCATCCCAAGGTGCGCTACGTCAAGGACGGCACCACGCGCGAGATCGTGTGCGATTTCATCGCCGGCTGCGACGGC
TTCCACGGCATCAGCCGGCAGAGCGTGCCGGCAAGTGCGGTGCAGTCGTTCGAGCGGGTGTATCCGTTCGGCTGGCTCGG
ATTGCTCTCCGACACTCCGCCGGTGTCGTCGGAGCTGATTTACGTCAACCACGACCGCGGCTTTGCGTTGTGCTCGATGC
GCTCGATGCACCGCAGCCGCTATTACGTGCAGTGCCCGCTCACCGACGACGTCGCCGACTGGAGCGACGACCGGTTCTGG
GACGAGCTGAAGAGCCGGCTCGATCCGGAAACCGCCGGAAAGCTGGTCACCGGCCCATCGATTGAAAAGAGCATCGCGCC
ACTACGCTCATTTGTCGCCGAGCCGATGCGGTTCGGCCGGCTGTTCCTCGCCGGCGACGCCGCCCACATCGTGCCGCCGA
CCGGCGCCAAGGGCCTGAACCTCGCCGCCAGCGACGTTTACTATCTCTCTCGCGTCATGCGCGAATACTACGCGGAGAAG
TCGGAGGCCGGCATCGATGCCTATTCGGCGAGCGCGCTTCGCCGGGTGTGGAAGGCCGAGCGGTTCTCCTGGTGGATGAC
CTCGCAGCTCCACCGCTTCCCCGACAGCGACGCCTTCTCCCAGCGCATCCAGACCGCCGAACTCGACTACCTGGTCAACT
CTAAGGCCGCGCTCACCTCGCTGGCGGAGAACTACGTCGGCCTGCCGTACTGA

Upstream 100 bases:

>100_bases
GCAAGTGACGGCCGCGTAATAGCTGCTAGACACCGGACGGCGGCTAGACGGCTTCGTGACGGTCCCGTAACGAGGCGACG
ACATCATCGGGGGAACGACC

Downstream 100 bases:

>100_bases
GACGACGCAGAGCCGCCATTCGCGGCTTAGCCATTGTCATTCCGGGGCGCGCGGAGCGCGAGCCCGGAATCCATAAGCCC
TGCGCTTGTGTTCTGGGACA

Product: 4-hydroxybenzoate 3-monooxygenase

Products: NA

Alternate protein names: PHBH; 4-hydroxybenzoate 3-monooxygenase [H]

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MRTQVAIIGAGPSGLLLGQLLHKYGIDAVIVERKDPDYVLSRIRAGVLEQGMVDLLDEAGVSTRLHQEALVHGGFEIAFA
GQRHHIDLRGATGGKSVTVYGQTEVTRDLMEARSAAGLTTIYDAADVSLHDFEGAHPKVRYVKDGTTREIVCDFIAGCDG
FHGISRQSVPASAVQSFERVYPFGWLGLLSDTPPVSSELIYVNHDRGFALCSMRSMHRSRYYVQCPLTDDVADWSDDRFW
DELKSRLDPETAGKLVTGPSIEKSIAPLRSFVAEPMRFGRLFLAGDAAHIVPPTGAKGLNLAASDVYYLSRVMREYYAEK
SEAGIDAYSASALRRVWKAERFSWWMTSQLHRFPDSDAFSQRIQTAELDYLVNSKAALTSLAENYVGLPY

Sequences:

>Translated_390_residues
MRTQVAIIGAGPSGLLLGQLLHKYGIDAVIVERKDPDYVLSRIRAGVLEQGMVDLLDEAGVSTRLHQEALVHGGFEIAFA
GQRHHIDLRGATGGKSVTVYGQTEVTRDLMEARSAAGLTTIYDAADVSLHDFEGAHPKVRYVKDGTTREIVCDFIAGCDG
FHGISRQSVPASAVQSFERVYPFGWLGLLSDTPPVSSELIYVNHDRGFALCSMRSMHRSRYYVQCPLTDDVADWSDDRFW
DELKSRLDPETAGKLVTGPSIEKSIAPLRSFVAEPMRFGRLFLAGDAAHIVPPTGAKGLNLAASDVYYLSRVMREYYAEK
SEAGIDAYSASALRRVWKAERFSWWMTSQLHRFPDSDAFSQRIQTAELDYLVNSKAALTSLAENYVGLPY
>Mature_390_residues
MRTQVAIIGAGPSGLLLGQLLHKYGIDAVIVERKDPDYVLSRIRAGVLEQGMVDLLDEAGVSTRLHQEALVHGGFEIAFA
GQRHHIDLRGATGGKSVTVYGQTEVTRDLMEARSAAGLTTIYDAADVSLHDFEGAHPKVRYVKDGTTREIVCDFIAGCDG
FHGISRQSVPASAVQSFERVYPFGWLGLLSDTPPVSSELIYVNHDRGFALCSMRSMHRSRYYVQCPLTDDVADWSDDRFW
DELKSRLDPETAGKLVTGPSIEKSIAPLRSFVAEPMRFGRLFLAGDAAHIVPPTGAKGLNLAASDVYYLSRVMREYYAEK
SEAGIDAYSASALRRVWKAERFSWWMTSQLHRFPDSDAFSQRIQTAELDYLVNSKAALTSLAENYVGLPY

Specific function: Unknown

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012733
- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: =1.14.13.2 [H]

Molecular weight: Translated: 43134; Mature: 43134

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTQVAIIGAGPSGLLLGQLLHKYGIDAVIVERKDPDYVLSRIRAGVLEQGMVDLLDEAG
CCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC
VSTRLHQEALVHGGFEIAFAGQRHHIDLRGATGGKSVTVYGQTEVTRDLMEARSAAGLTT
CHHHHHHHHHHHCCEEEEECCCEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCEE
IYDAADVSLHDFEGAHPKVRYVKDGTTREIVCDFIAGCDGFHGISRQSVPASAVQSFERV
EECCCCCEECCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
YPFGWLGLLSDTPPVSSELIYVNHDRGFALCSMRSMHRSRYYVQCPLTDDVADWSDDRFW
CCCHHEECCCCCCCCCCCEEEEECCCCEEHHHHHHHHHCCEEEECCCCCCCCCCCCHHHH
DELKSRLDPETAGKLVTGPSIEKSIAPLRSFVAEPMRFGRLFLAGDAAHIVPPTGAKGLN
HHHHHHCCHHHCCCEEECCCHHHHHHHHHHHHHHHHHHCEEEEECCCCEEECCCCCCCCC
LAASDVYYLSRVMREYYAEKSEAGIDAYSASALRRVWKAERFSWWMTSQLHRFPDSDAFS
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
QRIQTAELDYLVNSKAALTSLAENYVGLPY
HHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRTQVAIIGAGPSGLLLGQLLHKYGIDAVIVERKDPDYVLSRIRAGVLEQGMVDLLDEAG
CCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC
VSTRLHQEALVHGGFEIAFAGQRHHIDLRGATGGKSVTVYGQTEVTRDLMEARSAAGLTT
CHHHHHHHHHHHCCEEEEECCCEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCEE
IYDAADVSLHDFEGAHPKVRYVKDGTTREIVCDFIAGCDGFHGISRQSVPASAVQSFERV
EECCCCCEECCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
YPFGWLGLLSDTPPVSSELIYVNHDRGFALCSMRSMHRSRYYVQCPLTDDVADWSDDRFW
CCCHHEECCCCCCCCCCCEEEEECCCCEEHHHHHHHHHCCEEEECCCCCCCCCCCCHHHH
DELKSRLDPETAGKLVTGPSIEKSIAPLRSFVAEPMRFGRLFLAGDAAHIVPPTGAKGLN
HHHHHHCCHHHCCCEEECCCHHHHHHHHHHHHHHHHHHCEEEEECCCCEEECCCCCCCCC
LAASDVYYLSRVMREYYAEKSEAGIDAYSASALRRVWKAERFSWWMTSQLHRFPDSDAFS
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
QRIQTAELDYLVNSKAALTSLAENYVGLPY
HHHHHHHHHHHHCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2465205; 10984043; 7939628; 8555229; 8312276 [H]