| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is pobA [H]
Identifier: 192290376
GI number: 192290376
Start: 2143761
End: 2144933
Strand: Reverse
Name: pobA [H]
Synonym: Rpal_1983
Alternate gene names: 192290376
Gene position: 2144933-2143761 (Counterclockwise)
Preceding gene: 192290386
Following gene: 192290375
Centisome position: 37.34
GC content: 65.98
Gene sequence:
>1173_bases ATGCGGACACAAGTGGCCATCATCGGCGCGGGTCCGTCCGGACTGCTGCTCGGCCAGCTGCTGCACAAATACGGCATCGA CGCCGTCATCGTGGAACGCAAGGATCCGGACTACGTGCTGTCGCGGATTCGCGCCGGCGTGCTCGAACAGGGCATGGTCG ACCTGCTCGACGAAGCCGGCGTCTCCACCCGGTTGCACCAGGAAGCGCTGGTGCACGGCGGCTTCGAGATCGCGTTCGCC GGTCAGCGGCACCACATCGATCTGAGGGGCGCGACCGGCGGCAAGAGCGTCACCGTGTATGGCCAGACCGAGGTCACCCG CGACCTGATGGAAGCGCGTAGCGCCGCCGGTCTCACCACGATCTACGACGCCGCCGACGTCAGCCTGCACGACTTCGAAG GCGCCCATCCCAAGGTGCGCTACGTCAAGGACGGCACCACGCGCGAGATCGTGTGCGATTTCATCGCCGGCTGCGACGGC TTCCACGGCATCAGCCGGCAGAGCGTGCCGGCAAGTGCGGTGCAGTCGTTCGAGCGGGTGTATCCGTTCGGCTGGCTCGG ATTGCTCTCCGACACTCCGCCGGTGTCGTCGGAGCTGATTTACGTCAACCACGACCGCGGCTTTGCGTTGTGCTCGATGC GCTCGATGCACCGCAGCCGCTATTACGTGCAGTGCCCGCTCACCGACGACGTCGCCGACTGGAGCGACGACCGGTTCTGG GACGAGCTGAAGAGCCGGCTCGATCCGGAAACCGCCGGAAAGCTGGTCACCGGCCCATCGATTGAAAAGAGCATCGCGCC ACTACGCTCATTTGTCGCCGAGCCGATGCGGTTCGGCCGGCTGTTCCTCGCCGGCGACGCCGCCCACATCGTGCCGCCGA CCGGCGCCAAGGGCCTGAACCTCGCCGCCAGCGACGTTTACTATCTCTCTCGCGTCATGCGCGAATACTACGCGGAGAAG TCGGAGGCCGGCATCGATGCCTATTCGGCGAGCGCGCTTCGCCGGGTGTGGAAGGCCGAGCGGTTCTCCTGGTGGATGAC CTCGCAGCTCCACCGCTTCCCCGACAGCGACGCCTTCTCCCAGCGCATCCAGACCGCCGAACTCGACTACCTGGTCAACT CTAAGGCCGCGCTCACCTCGCTGGCGGAGAACTACGTCGGCCTGCCGTACTGA
Upstream 100 bases:
>100_bases GCAAGTGACGGCCGCGTAATAGCTGCTAGACACCGGACGGCGGCTAGACGGCTTCGTGACGGTCCCGTAACGAGGCGACG ACATCATCGGGGGAACGACC
Downstream 100 bases:
>100_bases GACGACGCAGAGCCGCCATTCGCGGCTTAGCCATTGTCATTCCGGGGCGCGCGGAGCGCGAGCCCGGAATCCATAAGCCC TGCGCTTGTGTTCTGGGACA
Product: 4-hydroxybenzoate 3-monooxygenase
Products: NA
Alternate protein names: PHBH; 4-hydroxybenzoate 3-monooxygenase [H]
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MRTQVAIIGAGPSGLLLGQLLHKYGIDAVIVERKDPDYVLSRIRAGVLEQGMVDLLDEAGVSTRLHQEALVHGGFEIAFA GQRHHIDLRGATGGKSVTVYGQTEVTRDLMEARSAAGLTTIYDAADVSLHDFEGAHPKVRYVKDGTTREIVCDFIAGCDG FHGISRQSVPASAVQSFERVYPFGWLGLLSDTPPVSSELIYVNHDRGFALCSMRSMHRSRYYVQCPLTDDVADWSDDRFW DELKSRLDPETAGKLVTGPSIEKSIAPLRSFVAEPMRFGRLFLAGDAAHIVPPTGAKGLNLAASDVYYLSRVMREYYAEK SEAGIDAYSASALRRVWKAERFSWWMTSQLHRFPDSDAFSQRIQTAELDYLVNSKAALTSLAENYVGLPY
Sequences:
>Translated_390_residues MRTQVAIIGAGPSGLLLGQLLHKYGIDAVIVERKDPDYVLSRIRAGVLEQGMVDLLDEAGVSTRLHQEALVHGGFEIAFA GQRHHIDLRGATGGKSVTVYGQTEVTRDLMEARSAAGLTTIYDAADVSLHDFEGAHPKVRYVKDGTTREIVCDFIAGCDG FHGISRQSVPASAVQSFERVYPFGWLGLLSDTPPVSSELIYVNHDRGFALCSMRSMHRSRYYVQCPLTDDVADWSDDRFW DELKSRLDPETAGKLVTGPSIEKSIAPLRSFVAEPMRFGRLFLAGDAAHIVPPTGAKGLNLAASDVYYLSRVMREYYAEK SEAGIDAYSASALRRVWKAERFSWWMTSQLHRFPDSDAFSQRIQTAELDYLVNSKAALTSLAENYVGLPY >Mature_390_residues MRTQVAIIGAGPSGLLLGQLLHKYGIDAVIVERKDPDYVLSRIRAGVLEQGMVDLLDEAGVSTRLHQEALVHGGFEIAFA GQRHHIDLRGATGGKSVTVYGQTEVTRDLMEARSAAGLTTIYDAADVSLHDFEGAHPKVRYVKDGTTREIVCDFIAGCDG FHGISRQSVPASAVQSFERVYPFGWLGLLSDTPPVSSELIYVNHDRGFALCSMRSMHRSRYYVQCPLTDDVADWSDDRFW DELKSRLDPETAGKLVTGPSIEKSIAPLRSFVAEPMRFGRLFLAGDAAHIVPPTGAKGLNLAASDVYYLSRVMREYYAEK SEAGIDAYSASALRRVWKAERFSWWMTSQLHRFPDSDAFSQRIQTAELDYLVNSKAALTSLAENYVGLPY
Specific function: Unknown
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012733 - InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: =1.14.13.2 [H]
Molecular weight: Translated: 43134; Mature: 43134
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTQVAIIGAGPSGLLLGQLLHKYGIDAVIVERKDPDYVLSRIRAGVLEQGMVDLLDEAG CCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC VSTRLHQEALVHGGFEIAFAGQRHHIDLRGATGGKSVTVYGQTEVTRDLMEARSAAGLTT CHHHHHHHHHHHCCEEEEECCCEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCEE IYDAADVSLHDFEGAHPKVRYVKDGTTREIVCDFIAGCDGFHGISRQSVPASAVQSFERV EECCCCCEECCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH YPFGWLGLLSDTPPVSSELIYVNHDRGFALCSMRSMHRSRYYVQCPLTDDVADWSDDRFW CCCHHEECCCCCCCCCCCEEEEECCCCEEHHHHHHHHHCCEEEECCCCCCCCCCCCHHHH DELKSRLDPETAGKLVTGPSIEKSIAPLRSFVAEPMRFGRLFLAGDAAHIVPPTGAKGLN HHHHHHCCHHHCCCEEECCCHHHHHHHHHHHHHHHHHHCEEEEECCCCEEECCCCCCCCC LAASDVYYLSRVMREYYAEKSEAGIDAYSASALRRVWKAERFSWWMTSQLHRFPDSDAFS CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH QRIQTAELDYLVNSKAALTSLAENYVGLPY HHHHHHHHHHHHCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MRTQVAIIGAGPSGLLLGQLLHKYGIDAVIVERKDPDYVLSRIRAGVLEQGMVDLLDEAG CCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC VSTRLHQEALVHGGFEIAFAGQRHHIDLRGATGGKSVTVYGQTEVTRDLMEARSAAGLTT CHHHHHHHHHHHCCEEEEECCCEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCEE IYDAADVSLHDFEGAHPKVRYVKDGTTREIVCDFIAGCDGFHGISRQSVPASAVQSFERV EECCCCCEECCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH YPFGWLGLLSDTPPVSSELIYVNHDRGFALCSMRSMHRSRYYVQCPLTDDVADWSDDRFW CCCHHEECCCCCCCCCCCEEEEECCCCEEHHHHHHHHHCCEEEECCCCCCCCCCCCHHHH DELKSRLDPETAGKLVTGPSIEKSIAPLRSFVAEPMRFGRLFLAGDAAHIVPPTGAKGLN HHHHHHCCHHHCCCEEECCCHHHHHHHHHHHHHHHHHHCEEEEECCCCEEECCCCCCCCC LAASDVYYLSRVMREYYAEKSEAGIDAYSASALRRVWKAERFSWWMTSQLHRFPDSDAFS CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH QRIQTAELDYLVNSKAALTSLAENYVGLPY HHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2465205; 10984043; 7939628; 8555229; 8312276 [H]