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The map label for this gene is 192290371

Identifier: 192290371

GI number: 192290371

Start: 2138916

End: 2140055

Strand: Reverse

Name: 192290371

Synonym: Rpal_1978

Alternate gene names: NA

Gene position: 2140055-2138916 (Counterclockwise)

Preceding gene: 192290372

Following gene: 192290370

Centisome position: 37.26

GC content: 65.53

Gene sequence:

>1140_bases
ATGCGTCGCAATCAGGTTGCTATCGTCGGCGCCGCCGAAACCACCAAGCTCGGCGTCATCCCCGATATGTCGCAGATCCA
GCTCCACGCTGACGCCGCGCTCAACGCGATCGCCGACGCCGGGCTGAAGCTCTCGGACATCGACGGCATCGCCACCGCTG
TGGAAACGCCGCAGCAGATCGCCCACTATCTCGGGATCACCCCGACCTGGGTCGACGGCACGTCGGTCGGCGGCTGCTCG
TTCATGCTGCACGTCCGCCACGCCGCCGCGGCGATCGAGGCCGGGCTGTGCAAGACCGTGCTGATCACCCATGCCGAGAG
CGGCAAGTCGATGATCGGCAAGCTGCCACGCTCGATTCCCGCCGACAGCCTGCAGGGCCAGTTCGAGGCGCCCTACGGCA
TCTACGGGCCGCCGAGCCAGTTTCCGATTCCGGTGCTGCGCTTCATGAAGACCTACGGCATCCCCCACGAGCAGATCGCC
TCGGTGGCCGTGGTGCAGCGAGAATGGGCCGCGAAGAATCCGCGCGCGATGATGAAGGACCCGATCACCGTCGAGGACGT
GCTGAACTCGCGGATGATCGCCTACCCGTTCCGGCTGCTGCAGTGCTGCCTCGTCACCGACGGCGGCGGCGCACTGATCA
TGACCTCGGCCGATCGCGCCAAGGACTTCCCGCACAAACCGGTCTATGTGCTCGGCACCGGCGAGAGCGTGGAAACGCCG
ATGGTCAGCCAGATGGAGACCTTCAACTCCTCGCGCGCCTTCAAGGTGGCGGGCCCGACCGCGTTCCGCGAAGCTGGTAT
CAGCCACAGCGACGTCGATCATCTGATGATCTACGACGCCTTTGCGCACCTGCCGCTGTTCGGCCTCGGCGACCTCGGCT
TCATGCCCTATGAGGAAACCGGAAAGTTCATCGCCGACGGCAACACCCGCCCCGGCGGCAAGCTGCCGCTCAACACCAAC
GGCGGCGGCCTGTCCTACATGCACTCGGGCATGTACGGCATGTACGCGTTGCAGGAAAGCGTCCGGCAGATGCGCGGCAT
CGCGCCCGCACAGGTGCCGAACGCGAAGATCTCGGTCTGCCACGGCGTCGGCGGCATGTTCGCTGCAAGCGGCACGATCA
TCTTCACCAACGAGAAGTAG

Upstream 100 bases:

>100_bases
CCGAGGCGCTCGAGCTCGATATGAAGCTGGAAGTCACCTTCCAGAAGATCGACGACAACCTCACCCTTCCGCAATTCCGT
CCGGCGAAGGGGTAAGCACC

Downstream 100 bases:

>100_bases
TTCGGCGCAAGCCGCAGTACACCACGTCATCGCCGGGCTCGCCCCGGCGATCCATCCCTCGAAAAGATGGATGCGCGGGC
CTACGCCGTGCCGAAGGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MRRNQVAIVGAAETTKLGVIPDMSQIQLHADAALNAIADAGLKLSDIDGIATAVETPQQIAHYLGITPTWVDGTSVGGCS
FMLHVRHAAAAIEAGLCKTVLITHAESGKSMIGKLPRSIPADSLQGQFEAPYGIYGPPSQFPIPVLRFMKTYGIPHEQIA
SVAVVQREWAAKNPRAMMKDPITVEDVLNSRMIAYPFRLLQCCLVTDGGGALIMTSADRAKDFPHKPVYVLGTGESVETP
MVSQMETFNSSRAFKVAGPTAFREAGISHSDVDHLMIYDAFAHLPLFGLGDLGFMPYEETGKFIADGNTRPGGKLPLNTN
GGGLSYMHSGMYGMYALQESVRQMRGIAPAQVPNAKISVCHGVGGMFAASGTIIFTNEK

Sequences:

>Translated_379_residues
MRRNQVAIVGAAETTKLGVIPDMSQIQLHADAALNAIADAGLKLSDIDGIATAVETPQQIAHYLGITPTWVDGTSVGGCS
FMLHVRHAAAAIEAGLCKTVLITHAESGKSMIGKLPRSIPADSLQGQFEAPYGIYGPPSQFPIPVLRFMKTYGIPHEQIA
SVAVVQREWAAKNPRAMMKDPITVEDVLNSRMIAYPFRLLQCCLVTDGGGALIMTSADRAKDFPHKPVYVLGTGESVETP
MVSQMETFNSSRAFKVAGPTAFREAGISHSDVDHLMIYDAFAHLPLFGLGDLGFMPYEETGKFIADGNTRPGGKLPLNTN
GGGLSYMHSGMYGMYALQESVRQMRGIAPAQVPNAKISVCHGVGGMFAASGTIIFTNEK
>Mature_379_residues
MRRNQVAIVGAAETTKLGVIPDMSQIQLHADAALNAIADAGLKLSDIDGIATAVETPQQIAHYLGITPTWVDGTSVGGCS
FMLHVRHAAAAIEAGLCKTVLITHAESGKSMIGKLPRSIPADSLQGQFEAPYGIYGPPSQFPIPVLRFMKTYGIPHEQIA
SVAVVQREWAAKNPRAMMKDPITVEDVLNSRMIAYPFRLLQCCLVTDGGGALIMTSADRAKDFPHKPVYVLGTGESVETP
MVSQMETFNSSRAFKVAGPTAFREAGISHSDVDHLMIYDAFAHLPLFGLGDLGFMPYEETGKFIADGNTRPGGKLPLNTN
GGGLSYMHSGMYGMYALQESVRQMRGIAPAQVPNAKISVCHGVGGMFAASGTIIFTNEK

Specific function: Unknown

COG id: COG0183

COG function: function code I; Acetyl-CoA acetyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI19923233, Length=389, Percent_Identity=26.2210796915167, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI302344760, Length=324, Percent_Identity=25.9259259259259, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI302344767, Length=261, Percent_Identity=26.4367816091954, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI302344762, Length=261, Percent_Identity=26.4367816091954, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI55956775, Length=223, Percent_Identity=24.6636771300448, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17537653, Length=379, Percent_Identity=23.2189973614776, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI19921506, Length=392, Percent_Identity=26.0204081632653, Blast_Score=88, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24585051, Length=392, Percent_Identity=26.2755102040816, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002155
- InterPro:   IPR016039
- InterPro:   IPR016038
- InterPro:   IPR020617
- InterPro:   IPR020616 [H]

Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]

EC number: NA

Molecular weight: Translated: 40511; Mature: 40511

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRNQVAIVGAAETTKLGVIPDMSQIQLHADAALNAIADAGLKLSDIDGIATAVETPQQI
CCCCEEEEEECCCCCEECCCCCHHHEEEEHHHHHHHHHHCCCEEECCCHHHHHHCCHHHH
AHYLGITPTWVDGTSVGGCSFMLHVRHAAAAIEAGLCKTVLITHAESGKSMIGKLPRSIP
HHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHCCCCCC
ADSLQGQFEAPYGIYGPPSQFPIPVLRFMKTYGIPHEQIASVAVVQREWAAKNPRAMMKD
CHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHCC
PITVEDVLNSRMIAYPFRLLQCCLVTDGGGALIMTSADRAKDFPHKPVYVLGTGESVETP
CCCHHHHHCCCHHHHHHHHHHHHEEECCCCEEEEECCHHHCCCCCCCEEEEECCCCCCCC
MVSQMETFNSSRAFKVAGPTAFREAGISHSDVDHLMIYDAFAHLPLFGLGDLGFMPYEET
HHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHCCEECCCCCCCCCHHHC
GKFIADGNTRPGGKLPLNTNGGGLSYMHSGMYGMYALQESVRQMRGIAPAQVPNAKISVC
CCEEECCCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
HGVGGMFAASGTIIFTNEK
ECCCCCEECCCEEEEECCC
>Mature Secondary Structure
MRRNQVAIVGAAETTKLGVIPDMSQIQLHADAALNAIADAGLKLSDIDGIATAVETPQQI
CCCCEEEEEECCCCCEECCCCCHHHEEEEHHHHHHHHHHCCCEEECCCHHHHHHCCHHHH
AHYLGITPTWVDGTSVGGCSFMLHVRHAAAAIEAGLCKTVLITHAESGKSMIGKLPRSIP
HHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHCCCCCC
ADSLQGQFEAPYGIYGPPSQFPIPVLRFMKTYGIPHEQIASVAVVQREWAAKNPRAMMKD
CHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHCC
PITVEDVLNSRMIAYPFRLLQCCLVTDGGGALIMTSADRAKDFPHKPVYVLGTGESVETP
CCCHHHHHCCCHHHHHHHHHHHHEEECCCCEEEEECCHHHCCCCCCCEEEEECCCCCCCC
MVSQMETFNSSRAFKVAGPTAFREAGISHSDVDHLMIYDAFAHLPLFGLGDLGFMPYEET
HHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHCCEECCCCCCCCCHHHC
GKFIADGNTRPGGKLPLNTNGGGLSYMHSGMYGMYALQESVRQMRGIAPAQVPNAKISVC
CCEEECCCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
HGVGGMFAASGTIIFTNEK
ECCCCCEECCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]