Click here to switch to the map view.

The map label for this gene is 192290197

Identifier: 192290197

GI number: 192290197

Start: 1933779

End: 1934636

Strand: Reverse

Name: 192290197

Synonym: Rpal_1800

Alternate gene names: NA

Gene position: 1934636-1933779 (Counterclockwise)

Preceding gene: 192290198

Following gene: 192290196

Centisome position: 33.68

GC content: 67.83

Gene sequence:

>858_bases
ATGACCGACGCGCTCGACATCGATCATCTGCGGCAATGGATCGGCCGCAGCGAACAGGCCACTGACTTCGTCACCCCGCA
ACTCGTGAAGGGCCTGCGCGCGACGCTGTTCCTCGACATCGGCAAACCGCAAGCCGGCGACGCTGCCCCCTTCACCGTGC
ATTGGTGCCTCGGCCAGCCGGTTTACCCGATGGACCAGCTCGGCCCGGACGGCCACCCGACCCGCGGCGGTTTCCTGCCG
CCGGTGCCGCTGCCGCGGCGGATGTGGGCGGGCGGCGAACTGCAGTTCGTCGACGCGCTCAAGGTCGGCGACGAAGTGAC
CCGAACCTCGACGATCGGCGACGTGACGATCAAGCAGGGCTCGACCGGCACGCTGTGCTTCGTCACCGTCAATCATGAGA
TCACAACGCCCCGCGGCGTGGCGATCCGCGACCGCCAGGACATCGTGTATCGCGACGTCCCGCCGCCCTCGTCTGCCACC
GCAGCGCCGGCCAAGCCCGCGGCTGCGCCGCCGGCCGCCAAGCATCGCGAAAGCCACCTCGCCGATCCGGTGCTGCTGTT
CCGTTATTCGGCGCTGACCTTCAACGGCCACCGCATTCACTACGACCGCGACTACGTCACCAAGGTCGAGGGCTATCCGG
GACTGATCGTGCACGGCCCGATGCAGGCCGCGCTGCTGGTCGAATTCGCCGCCAAGCTCAAAGGCAGCGTGCCGAAGACC
TTCAGCTATCGCGGCGTCCAGCCGCTGTTCGACGGCGCCGACTTCAGCGTCAACGCCAACGAGACCGCAGCCGGCCTCGA
ACTGTGGACCGCGAACGTCGACGGCGTGCCGACGATGAAGGCCACGGCGAGCTGGTAA

Upstream 100 bases:

>100_bases
AGTCAGCTATCCGGCGCCGGCGGCGATCTTCGTCGGCGACGAGCGCCGCTACGGCGCGGTGCCGGGCATCGGCGACAAGC
GCAAGTAAGCGAGGACCAAC

Downstream 100 bases:

>100_bases
AGCGCCACGCGTTAACCTCTCCCCGCGCGGGGAGAGGTCGACCGGCGTAGCCGGTCGGGTGAGGGGGCGCCTCCACTCAG
CCGAGCCTCAGTGCTCTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MTDALDIDHLRQWIGRSEQATDFVTPQLVKGLRATLFLDIGKPQAGDAAPFTVHWCLGQPVYPMDQLGPDGHPTRGGFLP
PVPLPRRMWAGGELQFVDALKVGDEVTRTSTIGDVTIKQGSTGTLCFVTVNHEITTPRGVAIRDRQDIVYRDVPPPSSAT
AAPAKPAAAPPAAKHRESHLADPVLLFRYSALTFNGHRIHYDRDYVTKVEGYPGLIVHGPMQAALLVEFAAKLKGSVPKT
FSYRGVQPLFDGADFSVNANETAAGLELWTANVDGVPTMKATASW

Sequences:

>Translated_285_residues
MTDALDIDHLRQWIGRSEQATDFVTPQLVKGLRATLFLDIGKPQAGDAAPFTVHWCLGQPVYPMDQLGPDGHPTRGGFLP
PVPLPRRMWAGGELQFVDALKVGDEVTRTSTIGDVTIKQGSTGTLCFVTVNHEITTPRGVAIRDRQDIVYRDVPPPSSAT
AAPAKPAAAPPAAKHRESHLADPVLLFRYSALTFNGHRIHYDRDYVTKVEGYPGLIVHGPMQAALLVEFAAKLKGSVPKT
FSYRGVQPLFDGADFSVNANETAAGLELWTANVDGVPTMKATASW
>Mature_284_residues
TDALDIDHLRQWIGRSEQATDFVTPQLVKGLRATLFLDIGKPQAGDAAPFTVHWCLGQPVYPMDQLGPDGHPTRGGFLPP
VPLPRRMWAGGELQFVDALKVGDEVTRTSTIGDVTIKQGSTGTLCFVTVNHEITTPRGVAIRDRQDIVYRDVPPPSSATA
APAKPAAAPPAAKHRESHLADPVLLFRYSALTFNGHRIHYDRDYVTKVEGYPGLIVHGPMQAALLVEFAAKLKGSVPKTF
SYRGVQPLFDGADFSVNANETAAGLELWTANVDGVPTMKATASW

Specific function: Unknown

COG id: COG3777

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30874; Mature: 30743

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDALDIDHLRQWIGRSEQATDFVTPQLVKGLRATLFLDIGKPQAGDAAPFTVHWCLGQP
CCCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCEEEEEEECCCCCCCCCCCEEEEEECCCC
VYPMDQLGPDGHPTRGGFLPPVPLPRRMWAGGELQFVDALKVGDEVTRTSTIGDVTIKQG
CCCHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEHHHCCCHHHHCCCCCEEEEECC
STGTLCFVTVNHEITTPRGVAIRDRQDIVYRDVPPPSSATAAPAKPAAAPPAAKHRESHL
CCCEEEEEEECCEECCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHC
ADPVLLFRYSALTFNGHRIHYDRDYVTKVEGYPGLIVHGPMQAALLVEFAAKLKGSVPKT
CCCEEEEEEEEEEECCCEEEECCCCEEEECCCCCEEEECCHHHHHHHHHHHHHCCCCCCC
FSYRGVQPLFDGADFSVNANETAAGLELWTANVDGVPTMKATASW
CCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
TDALDIDHLRQWIGRSEQATDFVTPQLVKGLRATLFLDIGKPQAGDAAPFTVHWCLGQP
CCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCEEEEEEECCCCCCCCCCCEEEEEECCCC
VYPMDQLGPDGHPTRGGFLPPVPLPRRMWAGGELQFVDALKVGDEVTRTSTIGDVTIKQG
CCCHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEHHHCCCHHHHCCCCCEEEEECC
STGTLCFVTVNHEITTPRGVAIRDRQDIVYRDVPPPSSATAAPAKPAAAPPAAKHRESHL
CCCEEEEEEECCEECCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHC
ADPVLLFRYSALTFNGHRIHYDRDYVTKVEGYPGLIVHGPMQAALLVEFAAKLKGSVPKT
CCCEEEEEEEEEEECCCEEEECCCCEEEECCCCCEEEECCHHHHHHHHHHHHHCCCCCCC
FSYRGVQPLFDGADFSVNANETAAGLELWTANVDGVPTMKATASW
CCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA