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The map label for this gene is ycjX [H]

Identifier: 192290170

GI number: 192290170

Start: 1906633

End: 1908102

Strand: Reverse

Name: ycjX [H]

Synonym: Rpal_1772

Alternate gene names: 192290170

Gene position: 1908102-1906633 (Counterclockwise)

Preceding gene: 192290174

Following gene: 192290169

Centisome position: 33.22

GC content: 68.64

Gene sequence:

>1470_bases
ATGGCCTTCAATTTTTCCAATCTGCTCGAAGATGCGTGGCTGTCGGCGCGGGCGCTCAAGGACTACAGCGAGAACCTGTT
CAACCCCACCATCCGGCTCGGCGTCACCGGTCTGTCGCGCGCCGGAAAGACGGTGTTCATCACCGCCCTCGTCCACGGGT
TGTGCCGGGGCGGCCGGTTTCCGATCTTTGAATCGATGTCGACCGGGCGGATCGCGACCGCGCGGCTGGCGCCGCAGCCG
GACGATGCGGTGCCGCGCTTCGCCTATGAGAACTTCCTCGCCACGCTGATCGAGCAGCGGCAATGGCCGAGTTCGACGGT
CGACATCAGCGAGTTGCGGCTGGTGATCGACTATCAGCGCAAGAACGGCTCCGAGCAGACGCTGACGCTCGACATCGTCG
ACTACCCGGGCGAATGGCTGCTCGACCTGCCGTTGCTCGGCAAGAGCTACGAGCGCTGGGCGGCCGAGAGTCTCGCGCTG
TCGCGGCAGGACCCGCGGGCCCGGGTGGCGCGGGAGTGGCACGCCCATCTCGCCACGCTCGATCCCAACGGACGCGAGAA
CGAGCAGGAAACCCTCAAAGCGGCGCGACTGTTCACCGCTTACTTGCGCGCCTGCCGCGACGAGCAGTTCGCGATGAGCC
TGCTGCCGCCGGGCCGCTTCCTGATGCCCGGCAATCTCGCCGGCTCGCCGGCACTGACCTTCGCGCCGCTGGACGTGCCG
GACGGCGGCATCGCGCCGGATGGCTCGCTGTGGGCGATGATGCGGCGGCGGTTCGAAGCCTACAAGGACGCCGTGGTGCG
GCCGTTCTTCCGCGATCACTTCGCCCGTCTCGACCGCCAGATCGTGCTGGCAGACGCGCTGTCGGCGTTCAACGCCGGTC
CCGAGGCGCTGCAGGATCTCGAAGCTGCGCTGGCCGGGATCCTGGAGTGTTTCCGGGTCGGTCGCTCGACGCTGCTCAGT
TCGGTGTTCCGGCCGCGGATCGACCGCATCCTGTTCGCCGCCACCAAGGCCGACCATCTGCACCATTCCAGCCACGACCG
GCTCGAGGCGATCCTGCGCAAGCTGGTCGAGCAGGCGATGAAGCGCGCGGAATTCGCCGGCGCCAAGGTCGACGTGGTGG
CGATGGCCGCCGTCCGCGCCACCCGGGAGGCCCAGGTGCAACGCGGCCGCGACCGGCTGCCCTCGATCGTCGGCACGCCG
ATCGCCGGCGAAATGGCCGAAGGCGAGGTGTTTGACGGCGAAACCGAAGTCGCCACCTTCCCGGGCGACCTGCCGACCAA
TCTGCAGGGCCTGTTCCGCGGCGAGGACACCTTCCGCGGGCTCGCCGCCGGCTCGCACCAGGAGGCCGACTTCCGCTTCC
TGCGCTTCCGCCCGCCGCGGCTCGACAGCCATGACCCCGACGGTCCGGCGCTGCCTCACATCCGCCTCGACCGGGCGCTT
CAGTTCCTGATCGGAGACCGACTGCAATGA

Upstream 100 bases:

>100_bases
GCGGCAAAGCCAAGACCGGCCGCACAGGTCGGATTGTCGCACGAATCGGCGGTTTCCGGCTAGTTTCGCCGGCAACTCTG
ACGATTGAACCTTGGCGCGC

Downstream 100 bases:

>100_bases
CCGAGCGGGTTCCTCCTCGCCGGCCGGCGACCTTCAAGCTCAGCGACCCGAGCGTGGTGCTGATCGATTCCGACGACGGC
GGCGGCAGCTACACGGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 488

Protein sequence:

>489_residues
MAFNFSNLLEDAWLSARALKDYSENLFNPTIRLGVTGLSRAGKTVFITALVHGLCRGGRFPIFESMSTGRIATARLAPQP
DDAVPRFAYENFLATLIEQRQWPSSTVDISELRLVIDYQRKNGSEQTLTLDIVDYPGEWLLDLPLLGKSYERWAAESLAL
SRQDPRARVAREWHAHLATLDPNGRENEQETLKAARLFTAYLRACRDEQFAMSLLPPGRFLMPGNLAGSPALTFAPLDVP
DGGIAPDGSLWAMMRRRFEAYKDAVVRPFFRDHFARLDRQIVLADALSAFNAGPEALQDLEAALAGILECFRVGRSTLLS
SVFRPRIDRILFAATKADHLHHSSHDRLEAILRKLVEQAMKRAEFAGAKVDVVAMAAVRATREAQVQRGRDRLPSIVGTP
IAGEMAEGEVFDGETEVATFPGDLPTNLQGLFRGEDTFRGLAAGSHQEADFRFLRFRPPRLDSHDPDGPALPHIRLDRAL
QFLIGDRLQ

Sequences:

>Translated_489_residues
MAFNFSNLLEDAWLSARALKDYSENLFNPTIRLGVTGLSRAGKTVFITALVHGLCRGGRFPIFESMSTGRIATARLAPQP
DDAVPRFAYENFLATLIEQRQWPSSTVDISELRLVIDYQRKNGSEQTLTLDIVDYPGEWLLDLPLLGKSYERWAAESLAL
SRQDPRARVAREWHAHLATLDPNGRENEQETLKAARLFTAYLRACRDEQFAMSLLPPGRFLMPGNLAGSPALTFAPLDVP
DGGIAPDGSLWAMMRRRFEAYKDAVVRPFFRDHFARLDRQIVLADALSAFNAGPEALQDLEAALAGILECFRVGRSTLLS
SVFRPRIDRILFAATKADHLHHSSHDRLEAILRKLVEQAMKRAEFAGAKVDVVAMAAVRATREAQVQRGRDRLPSIVGTP
IAGEMAEGEVFDGETEVATFPGDLPTNLQGLFRGEDTFRGLAAGSHQEADFRFLRFRPPRLDSHDPDGPALPHIRLDRAL
QFLIGDRLQ
>Mature_488_residues
AFNFSNLLEDAWLSARALKDYSENLFNPTIRLGVTGLSRAGKTVFITALVHGLCRGGRFPIFESMSTGRIATARLAPQPD
DAVPRFAYENFLATLIEQRQWPSSTVDISELRLVIDYQRKNGSEQTLTLDIVDYPGEWLLDLPLLGKSYERWAAESLALS
RQDPRARVAREWHAHLATLDPNGRENEQETLKAARLFTAYLRACRDEQFAMSLLPPGRFLMPGNLAGSPALTFAPLDVPD
GGIAPDGSLWAMMRRRFEAYKDAVVRPFFRDHFARLDRQIVLADALSAFNAGPEALQDLEAALAGILECFRVGRSTLLSS
VFRPRIDRILFAATKADHLHHSSHDRLEAILRKLVEQAMKRAEFAGAKVDVVAMAAVRATREAQVQRGRDRLPSIVGTPI
AGEMAEGEVFDGETEVATFPGDLPTNLQGLFRGEDTFRGLAAGSHQEADFRFLRFRPPRLDSHDPDGPALPHIRLDRALQ
FLIGDRLQ

Specific function: Unknown

COG id: COG3106

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1637 [H]

Homologues:

Organism=Escherichia coli, GI1787581, Length=483, Percent_Identity=35.4037267080745, Blast_Score=291, Evalue=5e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007413 [H]

Pfam domain/function: PF04317 DUF463 [H]

EC number: NA

Molecular weight: Translated: 54512; Mature: 54381

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFNFSNLLEDAWLSARALKDYSENLFNPTIRLGVTGLSRAGKTVFITALVHGLCRGGRF
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCHHHHHHHHHHHHCCCCC
PIFESMSTGRIATARLAPQPDDAVPRFAYENFLATLIEQRQWPSSTVDISELRLVIDYQR
CCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEEEEECC
KNGSEQTLTLDIVDYPGEWLLDLPLLGKSYERWAAESLALSRQDPRARVAREWHAHLATL
CCCCCCEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEE
DPNGRENEQETLKAARLFTAYLRACRDEQFAMSLLPPGRFLMPGNLAGSPALTFAPLDVP
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEECCCCCCCCCCEEEEECCCC
DGGIAPDGSLWAMMRRRFEAYKDAVVRPFFRDHFARLDRQIVLADALSAFNAGPEALQDL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
EAALAGILECFRVGRSTLLSSVFRPRIDRILFAATKADHLHHSSHDRLEAILRKLVEQAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
KRAEFAGAKVDVVAMAAVRATREAQVQRGRDRLPSIVGTPIAGEMAEGEVFDGETEVATF
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEECCCCCEEEC
PGDLPTNLQGLFRGEDTFRGLAAGSHQEADFRFLRFRPPRLDSHDPDGPALPHIRLDRAL
CCCCCCCHHHHHCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHH
QFLIGDRLQ
HHHHCCCCC
>Mature Secondary Structure 
AFNFSNLLEDAWLSARALKDYSENLFNPTIRLGVTGLSRAGKTVFITALVHGLCRGGRF
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCHHHHHHHHHHHHCCCCC
PIFESMSTGRIATARLAPQPDDAVPRFAYENFLATLIEQRQWPSSTVDISELRLVIDYQR
CCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEEEEECC
KNGSEQTLTLDIVDYPGEWLLDLPLLGKSYERWAAESLALSRQDPRARVAREWHAHLATL
CCCCCCEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEE
DPNGRENEQETLKAARLFTAYLRACRDEQFAMSLLPPGRFLMPGNLAGSPALTFAPLDVP
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEECCCCCCCCCCEEEEECCCC
DGGIAPDGSLWAMMRRRFEAYKDAVVRPFFRDHFARLDRQIVLADALSAFNAGPEALQDL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
EAALAGILECFRVGRSTLLSSVFRPRIDRILFAATKADHLHHSSHDRLEAILRKLVEQAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
KRAEFAGAKVDVVAMAAVRATREAQVQRGRDRLPSIVGTPIAGEMAEGEVFDGETEVATF
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEECCCCCEEEC
PGDLPTNLQGLFRGEDTFRGLAAGSHQEADFRFLRFRPPRLDSHDPDGPALPHIRLDRAL
CCCCCCCHHHHHCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHH
QFLIGDRLQ
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]