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The map label for this gene is ycjF [C]

Identifier: 192290169

GI number: 192290169

Start: 1905527

End: 1906636

Strand: Reverse

Name: ycjF [C]

Synonym: Rpal_1771

Alternate gene names: 192290169

Gene position: 1906636-1905527 (Counterclockwise)

Preceding gene: 192290170

Following gene: 192290168

Centisome position: 33.19

GC content: 69.64

Gene sequence:

>1110_bases
ATGACCGAGCGGGTTCCTCCTCGCCGGCCGGCGACCTTCAAGCTCAGCGACCCGAGCGTGGTGCTGATCGATTCCGACGA
CGGCGGCGGCAGCTACACGGCCAAACCGTCCGCGAAAGCGGACGCCAGGCCTGCCGCGTCTGCGGCCGGCGCCGCACCGC
CCCCCCCGCCGCCGCGCGCCCGGGTCGAACTCGCCCGCGAAGCCGAGCCGCCGATCTCGGCGCCGAAAGCGCCGAAGAGC
GTCATCAACCCGAAGAAGGGCTTCCGCTGGGGCACCGTGTTCTGGAGCGCCGCGACCGGTCTGGTGTCGCTGGCGTTCTG
GCTGTGGATCAGCAAGCTGGTCGAGGATCTGTTCGCGCAGAGTCAGACGCTCGGCACCATCGGCATGGTGCTGGCGCTGC
TCGCCGGCGGCTCGCTGGCGATCATCATCGGCCGCGAGGCGTTCGGGCTGATCCGGCTGGCACGGATCGAACAGCTCCAC
GCCCGCGCTGCGCGGGTGCTGGAAACCGACAACAGCGCCGAGGCCCGCGCCATCATCCGCGAACTGCTGAAGTTCGAACA
CCCCAACCCGCAGCTCGCGCACGGCCGCGCCACGCTGCAGAAGCACATCGACGACATCATCGACGGCGCCGACCTGATCC
GCCTCGCCGAGCGCGAACTGATGGCGCAGCTGGATCTGGAAGCGAAGGTGCTGATCTCGAAGGCCGCGCAGCGGGTGTCG
CTGGTGACCGCGATCAGCCCGAAGGCGCTGATCGACGTGCTGTTCGTCGCGATCGCCGCGACCCGGCTGATCGGCCAGCT
CGCGCGGCTGTACGGCGGCCGCCCCGGCGCGCTCGGCATGTTCAAGCTGATGCGCCAGACAGTGTCGCACCTTGCCATCA
CCGGCGGCATCGCGCTGAGCGACAGCGTGATGCAATCGGTGCTCGGCCATGGCCTCGCCTCGCGGCTGTCGGCCAAGCTC
GGCGAAGGCGTGGTCAACGGCATGCTCACCGCGCGGCTCGGCCTCGCCGCGATGGACCTCACCCGACCACTGCCGTTCGA
TGCCCTGCCCCGTCCGCAGCTCGGCGACCTCGTCAAGGACCTGATGAAGAAGCGGGAGAAGGACGAGTAA

Upstream 100 bases:

>100_bases
TCCGCCCGCCGCGGCTCGACAGCCATGACCCCGACGGTCCGGCGCTGCCTCACATCCGCCTCGACCGGGCGCTTCAGTTC
CTGATCGGAGACCGACTGCA

Downstream 100 bases:

>100_bases
GGGCCCGTTGACCCTGCGTCCAAGCTGTCCCGACGAAGTTTCTTGTGCTGACCAGCGCCTGCTGACACAACGACCGTCAT
TCCGGGGCGCGAACGACGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MTERVPPRRPATFKLSDPSVVLIDSDDGGGSYTAKPSAKADARPAASAAGAAPPPPPPRARVELAREAEPPISAPKAPKS
VINPKKGFRWGTVFWSAATGLVSLAFWLWISKLVEDLFAQSQTLGTIGMVLALLAGGSLAIIIGREAFGLIRLARIEQLH
ARAARVLETDNSAEARAIIRELLKFEHPNPQLAHGRATLQKHIDDIIDGADLIRLAERELMAQLDLEAKVLISKAAQRVS
LVTAISPKALIDVLFVAIAATRLIGQLARLYGGRPGALGMFKLMRQTVSHLAITGGIALSDSVMQSVLGHGLASRLSAKL
GEGVVNGMLTARLGLAAMDLTRPLPFDALPRPQLGDLVKDLMKKREKDE

Sequences:

>Translated_369_residues
MTERVPPRRPATFKLSDPSVVLIDSDDGGGSYTAKPSAKADARPAASAAGAAPPPPPPRARVELAREAEPPISAPKAPKS
VINPKKGFRWGTVFWSAATGLVSLAFWLWISKLVEDLFAQSQTLGTIGMVLALLAGGSLAIIIGREAFGLIRLARIEQLH
ARAARVLETDNSAEARAIIRELLKFEHPNPQLAHGRATLQKHIDDIIDGADLIRLAERELMAQLDLEAKVLISKAAQRVS
LVTAISPKALIDVLFVAIAATRLIGQLARLYGGRPGALGMFKLMRQTVSHLAITGGIALSDSVMQSVLGHGLASRLSAKL
GEGVVNGMLTARLGLAAMDLTRPLPFDALPRPQLGDLVKDLMKKREKDE
>Mature_368_residues
TERVPPRRPATFKLSDPSVVLIDSDDGGGSYTAKPSAKADARPAASAAGAAPPPPPPRARVELAREAEPPISAPKAPKSV
INPKKGFRWGTVFWSAATGLVSLAFWLWISKLVEDLFAQSQTLGTIGMVLALLAGGSLAIIIGREAFGLIRLARIEQLHA
RAARVLETDNSAEARAIIRELLKFEHPNPQLAHGRATLQKHIDDIIDGADLIRLAERELMAQLDLEAKVLISKAAQRVSL
VTAISPKALIDVLFVAIAATRLIGQLARLYGGRPGALGMFKLMRQTVSHLAITGGIALSDSVMQSVLGHGLASRLSAKLG
EGVVNGMLTARLGLAAMDLTRPLPFDALPRPQLGDLVKDLMKKREKDE

Specific function: Unknown

COG id: COG3768

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0283 family

Homologues:

Organism=Escherichia coli, GI1787582, Length=208, Percent_Identity=31.25, Blast_Score=99, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1583_RHOPA (Q6N9G6)

Other databases:

- EMBL:   BX572598
- RefSeq:   NP_946929.1
- GeneID:   2688864
- GenomeReviews:   BX571963_GR
- KEGG:   rpa:RPA1583
- NMPDR:   fig|258594.1.peg.1573
- HOGENOM:   HBG466177
- OMA:   IAHLAIT
- ProtClustDB:   PRK05415
- BioCyc:   RPAL258594:RPA1583-MONOMER
- HAMAP:   MF_01085
- InterPro:   IPR021147
- InterPro:   IPR006507
- TIGRFAMs:   TIGR01620

Pfam domain/function: PF05128 DUF697

EC number: NA

Molecular weight: Translated: 39404; Mature: 39272

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1dc99768)-; HASH(0x1e444e64)-; HASH(0x1e413ab0)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERVPPRRPATFKLSDPSVVLIDSDDGGGSYTAKPSAKADARPAASAAGAAPPPPPPRA
CCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHH
RVELAREAEPPISAPKAPKSVINPKKGFRWGTVFWSAATGLVSLAFWLWISKLVEDLFAQ
HHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQTLGTIGMVLALLAGGSLAIIIGREAFGLIRLARIEQLHARAARVLETDNSAEARAIIR
HHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ELLKFEHPNPQLAHGRATLQKHIDDIIDGADLIRLAERELMAQLDLEAKVLISKAAQRVS
HHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LVTAISPKALIDVLFVAIAATRLIGQLARLYGGRPGALGMFKLMRQTVSHLAITGGIALS
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHH
DSVMQSVLGHGLASRLSAKLGEGVVNGMLTARLGLAAMDLTRPLPFDALPRPQLGDLVKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
LMKKREKDE
HHHHHCCCH
>Mature Secondary Structure 
TERVPPRRPATFKLSDPSVVLIDSDDGGGSYTAKPSAKADARPAASAAGAAPPPPPPRA
CCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHH
RVELAREAEPPISAPKAPKSVINPKKGFRWGTVFWSAATGLVSLAFWLWISKLVEDLFAQ
HHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQTLGTIGMVLALLAGGSLAIIIGREAFGLIRLARIEQLHARAARVLETDNSAEARAIIR
HHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ELLKFEHPNPQLAHGRATLQKHIDDIIDGADLIRLAERELMAQLDLEAKVLISKAAQRVS
HHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LVTAISPKALIDVLFVAIAATRLIGQLARLYGGRPGALGMFKLMRQTVSHLAITGGIALS
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHH
DSVMQSVLGHGLASRLSAKLGEGVVNGMLTARLGLAAMDLTRPLPFDALPRPQLGDLVKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
LMKKREKDE
HHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA