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The map label for this gene is oxdC [H]

Identifier: 192289930

GI number: 192289930

Start: 1607535

End: 1609511

Strand: Reverse

Name: oxdC [H]

Synonym: Rpal_1526

Alternate gene names: 192289930

Gene position: 1609511-1607535 (Counterclockwise)

Preceding gene: 192289931

Following gene: 192289929

Centisome position: 28.02

GC content: 64.59

Gene sequence:

>1977_bases
ATGCCGACATCAGCCAAACCTCAACCGATCCGCGGCAGCTACGGCGCCGACGATCCCGGCCCGCGCAATATCGAACTCGA
TCTGCAGAACCCCGATATTCTCATTCCGCCGCCAACCGACAACGGCTCGATCCCGAATCTGAAGTTCTCGTTCGGCATGG
CGCACAACCGGCTCGAAGCCGGCGGCTGGGCGCGCGAAGTCACGGTCCGGGAATTGCCTGCGGCCAAGGGTATGGCTGGC
GTCGACATGCGCCTCGGCCCCGGCGTGGTCCGTGAGCTGCATTGGCACAAGGAGGCCGAATGGGGCTACGTGCTCGAGGG
CCGCTGCCGCGTCACCGCCGTCGATGCCGATCGCGGCGTCTTCGTCGACGACCTGAAGGCCGGTGACATCTGGCTGTTTC
CCTCCGGCATCCCGCATTCGATCCAGGCGCACGCGGAAGGCTGCGAGTTTCTGCTGGTGTTCGACGACGGCAACTTCTCC
GAGAACGAGACGCTGCTGGTGACCGAGCTGATGGCGCACATGCCGATCGAGGTCGTCGCCAAGAACTTCGGCATCCCGGC
GACGCATTTCGCCAATCTGCCGCCGAAGGAAAAGTACATCTTCCCGCTGCCGGTGCCGCCGCCGCTCGGCGAGGTGATGG
CGAAGCTGCCGAAGAACCGCCCTGCCATGCCGTTCACGGTGCACGGCGGCGACTTCACGCCAACGCAGTGGGACGGCGGC
AAGACCACGGTGATCGACGTCCGCAACTTCCCGGTGACCAACATGGCAGCGCTGATCATCGATCTCGAGCCCGGCGCGCT
CCGCGAGATTCATTGGCACCCCGACGCCGACGAATGGCAATACTACATCCAGGGCGAGGCCCGGATGACGGTGTTCGACG
CCACTTCCAAGGCGCGGACGTTCAACTATCGCGCCGGCGATGTCGGCTATGTGCCGAAGACCCTCGCGCACTACATCGAG
AACATCGGCACCACGCCGGTGCGCGTGCTGAACGTCTTCAACAAGCCTCTGTTCAAGGACGTTCCGCTCAATCAGTGGCT
GGCGCTGACACCGCCGGATCTGGTGCGCGGCCACCTCGAGCTCGACGACATCGCGATGGCGGCGCTCAATCCAAACCCAC
GTTCCGTGACGCGCTGGCACCGGGCGAGCCCGACTGATGCCTGCGTGCGAAATAATCGCGCGCAAGCATCGTTGGTTCTC
GTCCGAGTGCGGAGCCGACATCCAGAGAGAGTGGCCACGATGCCGTCGGATGCCGACATGGCAGCAGCGCTGGAGACCGC
GAACGGTGCCGGCGCAAGGTCGATGCTCCACGGCGTGTTTGCACTGTCGCTGACGTGCATGGCGGGATACCTCGACGCCG
TGGGCTACACCCATTTGGCCGGCCTGTACGTCTCGTTCATGAGCGGCAACAGCACCCGCCTGGGCATTGCGATTGCCAAA
GGCGATCGGGAGCTCTTGGTGCCCTGCGTCGTGGTGATCATCGGATTCGTCGCAGGCGCATTCATCGGATCGTTGATAGC
TAACGCCGTTAGTCGCTTCAAGCTGACTGCGGTCCTGGCCACGGAGACCGCCCTGCTGCTGTCGACGATCGCTCTGAGCC
TCGACACCACAAGCTACGCCGCGCTGCTTCCGATCTGCGTCGCGATGGGTATTCAGAACGCCGCTCATGAGACGATCGCC
GGCGCCGAACTCGGCAAGAGCTTCATCACCGGCTTTCTGTTCAATCTCGGCAAGGCTCTGGCACATCTGGCTCAGGGCCG
AGGAGGCGCGGCTCGGGCGCTGGCCTATGGCGCCTCATGGAGCGCCTTTCTCCTCGGCGTCGTTCTGGGCACCCTGGCAC
TGGGATATTTCGGCCTGATCGACGCACTGTCGGGGGCCGCTGGGGTGCTGTTGGCTCTCGCAATCGGCGCGGCGTCCGAC
CAGTTCGACCCGCCGAACCCGATCGCCGACTCACGGCGGCGGTCGACCAGCCCGTAA

Upstream 100 bases:

>100_bases
AGCGCGGCACATCCGTCCCACTTGAGCAACGCCACTCGCTCGACCGCCCTCAACGGCGCGCCGAGACACCCGGCTCAATC
CAATGCAGTGGAGACACGCA

Downstream 100 bases:

>100_bases
CGGGCTGGCGCATCCGACAGGGCTGTCAAGCCGACAGCCATCGGGCGCGTACCATCGGATAGATGGGTCGTGAGTAGCCG
GACGCATCTTCGGCATCGGT

Product: bicupin, oxalate decarboxylase family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 658; Mature: 657

Protein sequence:

>658_residues
MPTSAKPQPIRGSYGADDPGPRNIELDLQNPDILIPPPTDNGSIPNLKFSFGMAHNRLEAGGWAREVTVRELPAAKGMAG
VDMRLGPGVVRELHWHKEAEWGYVLEGRCRVTAVDADRGVFVDDLKAGDIWLFPSGIPHSIQAHAEGCEFLLVFDDGNFS
ENETLLVTELMAHMPIEVVAKNFGIPATHFANLPPKEKYIFPLPVPPPLGEVMAKLPKNRPAMPFTVHGGDFTPTQWDGG
KTTVIDVRNFPVTNMAALIIDLEPGALREIHWHPDADEWQYYIQGEARMTVFDATSKARTFNYRAGDVGYVPKTLAHYIE
NIGTTPVRVLNVFNKPLFKDVPLNQWLALTPPDLVRGHLELDDIAMAALNPNPRSVTRWHRASPTDACVRNNRAQASLVL
VRVRSRHPERVATMPSDADMAAALETANGAGARSMLHGVFALSLTCMAGYLDAVGYTHLAGLYVSFMSGNSTRLGIAIAK
GDRELLVPCVVVIIGFVAGAFIGSLIANAVSRFKLTAVLATETALLLSTIALSLDTTSYAALLPICVAMGIQNAAHETIA
GAELGKSFITGFLFNLGKALAHLAQGRGGAARALAYGASWSAFLLGVVLGTLALGYFGLIDALSGAAGVLLALAIGAASD
QFDPPNPIADSRRRSTSP

Sequences:

>Translated_658_residues
MPTSAKPQPIRGSYGADDPGPRNIELDLQNPDILIPPPTDNGSIPNLKFSFGMAHNRLEAGGWAREVTVRELPAAKGMAG
VDMRLGPGVVRELHWHKEAEWGYVLEGRCRVTAVDADRGVFVDDLKAGDIWLFPSGIPHSIQAHAEGCEFLLVFDDGNFS
ENETLLVTELMAHMPIEVVAKNFGIPATHFANLPPKEKYIFPLPVPPPLGEVMAKLPKNRPAMPFTVHGGDFTPTQWDGG
KTTVIDVRNFPVTNMAALIIDLEPGALREIHWHPDADEWQYYIQGEARMTVFDATSKARTFNYRAGDVGYVPKTLAHYIE
NIGTTPVRVLNVFNKPLFKDVPLNQWLALTPPDLVRGHLELDDIAMAALNPNPRSVTRWHRASPTDACVRNNRAQASLVL
VRVRSRHPERVATMPSDADMAAALETANGAGARSMLHGVFALSLTCMAGYLDAVGYTHLAGLYVSFMSGNSTRLGIAIAK
GDRELLVPCVVVIIGFVAGAFIGSLIANAVSRFKLTAVLATETALLLSTIALSLDTTSYAALLPICVAMGIQNAAHETIA
GAELGKSFITGFLFNLGKALAHLAQGRGGAARALAYGASWSAFLLGVVLGTLALGYFGLIDALSGAAGVLLALAIGAASD
QFDPPNPIADSRRRSTSP
>Mature_657_residues
PTSAKPQPIRGSYGADDPGPRNIELDLQNPDILIPPPTDNGSIPNLKFSFGMAHNRLEAGGWAREVTVRELPAAKGMAGV
DMRLGPGVVRELHWHKEAEWGYVLEGRCRVTAVDADRGVFVDDLKAGDIWLFPSGIPHSIQAHAEGCEFLLVFDDGNFSE
NETLLVTELMAHMPIEVVAKNFGIPATHFANLPPKEKYIFPLPVPPPLGEVMAKLPKNRPAMPFTVHGGDFTPTQWDGGK
TTVIDVRNFPVTNMAALIIDLEPGALREIHWHPDADEWQYYIQGEARMTVFDATSKARTFNYRAGDVGYVPKTLAHYIEN
IGTTPVRVLNVFNKPLFKDVPLNQWLALTPPDLVRGHLELDDIAMAALNPNPRSVTRWHRASPTDACVRNNRAQASLVLV
RVRSRHPERVATMPSDADMAAALETANGAGARSMLHGVFALSLTCMAGYLDAVGYTHLAGLYVSFMSGNSTRLGIAIAKG
DRELLVPCVVVIIGFVAGAFIGSLIANAVSRFKLTAVLATETALLLSTIALSLDTTSYAALLPICVAMGIQNAAHETIAG
AELGKSFITGFLFNLGKALAHLAQGRGGAARALAYGASWSAFLLGVVLGTLALGYFGLIDALSGAAGVLLALAIGAASDQ
FDPPNPIADSRRRSTSP

Specific function: Converts oxalate to formate and CO(2) in an O(2)- dependent reaction. Can also catalyze minor side reactions:oxalate oxidation to produce H(2)O(2), and oxalate-dependent, H(2)O(2)-independent dye oxidations [H]

COG id: COG2140

COG function: function code GR; Thermophilic glucose-6-phosphate isomerase and related metalloenzymes

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis oxdD [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017774
- InterPro:   IPR006045
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: PF00190 Cupin_1 [H]

EC number: =4.1.1.2 [H]

Molecular weight: Translated: 70607; Mature: 70476

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTSAKPQPIRGSYGADDPGPRNIELDLQNPDILIPPPTDNGSIPNLKFSFGMAHNRLEA
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCEEEEECCCCCCCCC
GGWAREVTVRELPAAKGMAGVDMRLGPGVVRELHWHKEAEWGYVLEGRCRVTAVDADRGV
CCCEEEEHHHHCCCCCCCCCCCEECCCHHHHHHHHCCCCCCCEEEECCEEEEEEECCCCC
FVDDLKAGDIWLFPSGIPHSIQAHAEGCEFLLVFDDGNFSENETLLVTELMAHMPIEVVA
EEECCCCCCEEEECCCCCCCHHHCCCCCEEEEEEECCCCCCCCEEHHHHHHHHCCHHHHH
KNFGIPATHFANLPPKEKYIFPLPVPPPLGEVMAKLPKNRPAMPFTVHGGDFTPTQWDGG
HHCCCCHHHHCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCC
KTTVIDVRNFPVTNMAALIIDLEPGALREIHWHPDADEWQYYIQGEARMTVFDATSKART
CEEEEEECCCCCCCEEEEEEECCCCCEEEEECCCCCCCEEEEEECCEEEEEEECCCCCEE
FNYRAGDVGYVPKTLAHYIENIGTTPVRVLNVFNKPLFKDVPLNQWLALTPPDLVRGHLE
EECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHCCCC
LDDIAMAALNPNPRSVTRWHRASPTDACVRNNRAQASLVLVRVRSRHPERVATMPSDADM
HHHEEEEECCCCCCHHHHHCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCEECCCCCCHH
AAALETANGAGARSMLHGVFALSLTCMAGYLDAVGYTHLAGLYVSFMSGNSTRLGIAIAK
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEEEC
GDRELLVPCVVVIIGFVAGAFIGSLIANAVSRFKLTAVLATETALLLSTIALSLDTTSYA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHCCCCHHH
ALLPICVAMGIQNAAHETIAGAELGKSFITGFLFNLGKALAHLAQGRGGAARALAYGASW
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCH
SAFLLGVVLGTLALGYFGLIDALSGAAGVLLALAIGAASDQFDPPNPIADSRRRSTSP
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PTSAKPQPIRGSYGADDPGPRNIELDLQNPDILIPPPTDNGSIPNLKFSFGMAHNRLEA
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCEEEEECCCCCCCCC
GGWAREVTVRELPAAKGMAGVDMRLGPGVVRELHWHKEAEWGYVLEGRCRVTAVDADRGV
CCCEEEEHHHHCCCCCCCCCCCEECCCHHHHHHHHCCCCCCCEEEECCEEEEEEECCCCC
FVDDLKAGDIWLFPSGIPHSIQAHAEGCEFLLVFDDGNFSENETLLVTELMAHMPIEVVA
EEECCCCCCEEEECCCCCCCHHHCCCCCEEEEEEECCCCCCCCEEHHHHHHHHCCHHHHH
KNFGIPATHFANLPPKEKYIFPLPVPPPLGEVMAKLPKNRPAMPFTVHGGDFTPTQWDGG
HHCCCCHHHHCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCC
KTTVIDVRNFPVTNMAALIIDLEPGALREIHWHPDADEWQYYIQGEARMTVFDATSKART
CEEEEEECCCCCCCEEEEEEECCCCCEEEEECCCCCCCEEEEEECCEEEEEEECCCCCEE
FNYRAGDVGYVPKTLAHYIENIGTTPVRVLNVFNKPLFKDVPLNQWLALTPPDLVRGHLE
EECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHCCCC
LDDIAMAALNPNPRSVTRWHRASPTDACVRNNRAQASLVLVRVRSRHPERVATMPSDADM
HHHEEEEECCCCCCHHHHHCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCEECCCCCCHH
AAALETANGAGARSMLHGVFALSLTCMAGYLDAVGYTHLAGLYVSFMSGNSTRLGIAIAK
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEEEC
GDRELLVPCVVVIIGFVAGAFIGSLIANAVSRFKLTAVLATETALLLSTIALSLDTTSYA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHCCCCHHH
ALLPICVAMGIQNAAHETIAGAELGKSFITGFLFNLGKALAHLAQGRGGAARALAYGASW
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCH
SAFLLGVVLGTLALGYFGLIDALSGAAGVLLALAIGAASDQFDPPNPIADSRRRSTSP
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377; 10960116; 11546787; 12056897 [H]