Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

Click here to switch to the map view.

The map label for this gene is crcB3 [H]

Identifier: 192289931

GI number: 192289931

Start: 1609692

End: 1610135

Strand: Reverse

Name: crcB3 [H]

Synonym: Rpal_1527

Alternate gene names: 192289931

Gene position: 1610135-1609692 (Counterclockwise)

Preceding gene: 192289932

Following gene: 192289930

Centisome position: 28.03

GC content: 63.74

Gene sequence:

>444_bases
ATGCCGGCCTCGCGCATCGTTCTCTGCACCGCCGTCGCGCTCGGCAGCGCGCTCGGGGCGCTGTCGCGGTTCGCTTCGGC
TGCGATTATCATGGAAGTCGGAGGCAACGGCGATCTGATCGCGACCGCCGTCGTCAACATCGTCGGCTCGTTCATCATCG
CTCTTTACGCGACGCTGACGGATCGGCGCGGGGTTTTCCCCGCGAGCGAGGTGTCGCGTCAGTTCGTGATGGCGGGATTC
TGTGGCGGCTTCACGACGCGGTCGCTGATGGGTCTGGAGACGTTCACGCTCATTCTGGATCGTCACCCGCTCTTGGGAAT
CGCCTATGTGACCGGCGTCGTCGCACTCTCACTGCTCGCTGCCGCAGGCGGATATCGATTGGGCCGTTCGTTCGAGCCTG
TGGCTGAGGTCAAGACGATCGAAGAATGCCGGGCGCTGTCATGA

Upstream 100 bases:

>100_bases
TCGCCGTGCTGAACGTGATCGCATCGACCACGCTGTGTCTGATCGCCGTGGCACTGGGCTATTTCGGTACGATCTCGGCC
GCGGGCGGAGGAGCCTGACC

Downstream 100 bases:

>100_bases
CGTATGCCATTCACAACCCACCCTGCGCGATCGTTCGATAGCAGAACCGCTCCACAATCGGCGTGCAATTGGACAAGCGT
AGCGCGGCACATCCGTCCCA

Product: Camphor resistance CrcB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MPASRIVLCTAVALGSALGALSRFASAAIIMEVGGNGDLIATAVVNIVGSFIIALYATLTDRRGVFPASEVSRQFVMAGF
CGGFTTRSLMGLETFTLILDRHPLLGIAYVTGVVALSLLAAAGGYRLGRSFEPVAEVKTIEECRALS

Sequences:

>Translated_147_residues
MPASRIVLCTAVALGSALGALSRFASAAIIMEVGGNGDLIATAVVNIVGSFIIALYATLTDRRGVFPASEVSRQFVMAGF
CGGFTTRSLMGLETFTLILDRHPLLGIAYVTGVVALSLLAAAGGYRLGRSFEPVAEVKTIEECRALS
>Mature_146_residues
PASRIVLCTAVALGSALGALSRFASAAIIMEVGGNGDLIATAVVNIVGSFIIALYATLTDRRGVFPASEVSRQFVMAGFC
GGFTTRSLMGLETFTLILDRHPLLGIAYVTGVVALSLLAAAGGYRLGRSFEPVAEVKTIEECRALS

Specific function: Unknown

COG id: COG0239

COG function: function code D; Integral membrane protein possibly involved in chromosome condensation

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CrcB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003691 [H]

Pfam domain/function: PF02537 CRCB [H]

EC number: NA

Molecular weight: Translated: 15271; Mature: 15140

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPASRIVLCTAVALGSALGALSRFASAAIIMEVGGNGDLIATAVVNIVGSFIIALYATLT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
DRRGVFPASEVSRQFVMAGFCGGFTTRSLMGLETFTLILDRHPLLGIAYVTGVVALSLLA
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AAGGYRLGRSFEPVAEVKTIEECRALS
HHCCHHCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PASRIVLCTAVALGSALGALSRFASAAIIMEVGGNGDLIATAVVNIVGSFIIALYATLT
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
DRRGVFPASEVSRQFVMAGFCGGFTTRSLMGLETFTLILDRHPLLGIAYVTGVVALSLLA
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AAGGYRLGRSFEPVAEVKTIEECRALS
HHCCHHCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA