| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is crcB3 [H]
Identifier: 192289931
GI number: 192289931
Start: 1609692
End: 1610135
Strand: Reverse
Name: crcB3 [H]
Synonym: Rpal_1527
Alternate gene names: 192289931
Gene position: 1610135-1609692 (Counterclockwise)
Preceding gene: 192289932
Following gene: 192289930
Centisome position: 28.03
GC content: 63.74
Gene sequence:
>444_bases ATGCCGGCCTCGCGCATCGTTCTCTGCACCGCCGTCGCGCTCGGCAGCGCGCTCGGGGCGCTGTCGCGGTTCGCTTCGGC TGCGATTATCATGGAAGTCGGAGGCAACGGCGATCTGATCGCGACCGCCGTCGTCAACATCGTCGGCTCGTTCATCATCG CTCTTTACGCGACGCTGACGGATCGGCGCGGGGTTTTCCCCGCGAGCGAGGTGTCGCGTCAGTTCGTGATGGCGGGATTC TGTGGCGGCTTCACGACGCGGTCGCTGATGGGTCTGGAGACGTTCACGCTCATTCTGGATCGTCACCCGCTCTTGGGAAT CGCCTATGTGACCGGCGTCGTCGCACTCTCACTGCTCGCTGCCGCAGGCGGATATCGATTGGGCCGTTCGTTCGAGCCTG TGGCTGAGGTCAAGACGATCGAAGAATGCCGGGCGCTGTCATGA
Upstream 100 bases:
>100_bases TCGCCGTGCTGAACGTGATCGCATCGACCACGCTGTGTCTGATCGCCGTGGCACTGGGCTATTTCGGTACGATCTCGGCC GCGGGCGGAGGAGCCTGACC
Downstream 100 bases:
>100_bases CGTATGCCATTCACAACCCACCCTGCGCGATCGTTCGATAGCAGAACCGCTCCACAATCGGCGTGCAATTGGACAAGCGT AGCGCGGCACATCCGTCCCA
Product: Camphor resistance CrcB protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MPASRIVLCTAVALGSALGALSRFASAAIIMEVGGNGDLIATAVVNIVGSFIIALYATLTDRRGVFPASEVSRQFVMAGF CGGFTTRSLMGLETFTLILDRHPLLGIAYVTGVVALSLLAAAGGYRLGRSFEPVAEVKTIEECRALS
Sequences:
>Translated_147_residues MPASRIVLCTAVALGSALGALSRFASAAIIMEVGGNGDLIATAVVNIVGSFIIALYATLTDRRGVFPASEVSRQFVMAGF CGGFTTRSLMGLETFTLILDRHPLLGIAYVTGVVALSLLAAAGGYRLGRSFEPVAEVKTIEECRALS >Mature_146_residues PASRIVLCTAVALGSALGALSRFASAAIIMEVGGNGDLIATAVVNIVGSFIIALYATLTDRRGVFPASEVSRQFVMAGFC GGFTTRSLMGLETFTLILDRHPLLGIAYVTGVVALSLLAAAGGYRLGRSFEPVAEVKTIEECRALS
Specific function: Unknown
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 15271; Mature: 15140
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASRIVLCTAVALGSALGALSRFASAAIIMEVGGNGDLIATAVVNIVGSFIIALYATLT CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH DRRGVFPASEVSRQFVMAGFCGGFTTRSLMGLETFTLILDRHPLLGIAYVTGVVALSLLA CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AAGGYRLGRSFEPVAEVKTIEECRALS HHCCHHCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure PASRIVLCTAVALGSALGALSRFASAAIIMEVGGNGDLIATAVVNIVGSFIIALYATLT CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH DRRGVFPASEVSRQFVMAGFCGGFTTRSLMGLETFTLILDRHPLLGIAYVTGVVALSLLA CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AAGGYRLGRSFEPVAEVKTIEECRALS HHCCHHCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA