Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

Click here to switch to the map view.

The map label for this gene is 192289900

Identifier: 192289900

GI number: 192289900

Start: 1574848

End: 1575219

Strand: Reverse

Name: 192289900

Synonym: Rpal_1492

Alternate gene names: NA

Gene position: 1575219-1574848 (Counterclockwise)

Preceding gene: 192289902

Following gene: 192289897

Centisome position: 27.42

GC content: 69.62

Gene sequence:

>372_bases
ATGCCGCGCCGGAGTGCCTTGCTGGGCCAACCGCTGTTTCGCCTCCTGGCGATCAATCTGGCGATCGGTGTGATGATCGC
GGCCCTGCTGCTCGGCGGGCTGCTGTATATCAACCCCGGCCATTTGCGCGACCTGATCTTCGCCGACGACTCGCCGGGCA
CCGCGCTCGGCCTGTTGCTGTTCGGCTTCGTCGTCACCTTCGGATCGGCCGCGATGGGGTCGGCCATCATGGCGATGGGC
AGCGATCTGCGCGGCGGCGGCAAGGGCGGCAGGAAGCTGGCGCTGCCGATCGAGATGATCCCCGGTGCCAAGGCGATCCC
GGTGCGCGCCGAGCATGGCGCCCGCGCGGTGCGCCGGCACGGCAGCCTCTGA

Upstream 100 bases:

>100_bases
GCGGGACCAACAGCGCCATATCTGACAAGTCTGATCGGCCCCGAATCCTGGGACGCTGGCGCCAAGCTTGCGCACCATCG
TTATCGAAGGGAAGAACATC

Downstream 100 bases:

>100_bases
GCTGGCAGCTTGCGGCGTCATCCGGCGCCGTAGCGCTTCATCTCTCCCGACCCGAACGGCCCGCACCATCGCGGCTCCTC
TCGCATCAAAACCGCGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MPRRSALLGQPLFRLLAINLAIGVMIAALLLGGLLYINPGHLRDLIFADDSPGTALGLLLFGFVVTFGSAAMGSAIMAMG
SDLRGGGKGGRKLALPIEMIPGAKAIPVRAEHGARAVRRHGSL

Sequences:

>Translated_123_residues
MPRRSALLGQPLFRLLAINLAIGVMIAALLLGGLLYINPGHLRDLIFADDSPGTALGLLLFGFVVTFGSAAMGSAIMAMG
SDLRGGGKGGRKLALPIEMIPGAKAIPVRAEHGARAVRRHGSL
>Mature_122_residues
PRRSALLGQPLFRLLAINLAIGVMIAALLLGGLLYINPGHLRDLIFADDSPGTALGLLLFGFVVTFGSAAMGSAIMAMGS
DLRGGGKGGRKLALPIEMIPGAKAIPVRAEHGARAVRRHGSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12725; Mature: 12593

Theoretical pI: Translated: 11.95; Mature: 11.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRRSALLGQPLFRLLAINLAIGVMIAALLLGGLLYINPGHLRDLIFADDSPGTALGLLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHEEEEEECCCCCHHHHHHH
FGFVVTFGSAAMGSAIMAMGSDLRGGGKGGRKLALPIEMIPGAKAIPVRAEHGARAVRRH
HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCEEEEEHEECCCCCCCCEECHHHHHHHHHC
GSL
CCC
>Mature Secondary Structure 
PRRSALLGQPLFRLLAINLAIGVMIAALLLGGLLYINPGHLRDLIFADDSPGTALGLLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHEEEEEECCCCCHHHHHHH
FGFVVTFGSAAMGSAIMAMGSDLRGGGKGGRKLALPIEMIPGAKAIPVRAEHGARAVRRH
HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCEEEEEHEECCCCCCCCEECHHHHHHHHHC
GSL
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA