| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289865
Identifier: 192289865
GI number: 192289865
Start: 1539615
End: 1540079
Strand: Reverse
Name: 192289865
Synonym: Rpal_1455
Alternate gene names: NA
Gene position: 1540079-1539615 (Counterclockwise)
Preceding gene: 192289872
Following gene: 192289860
Centisome position: 26.81
GC content: 70.54
Gene sequence:
>465_bases ATGAGTGACGACAGCGCGCCGGCAACGAAGCCAACCACCAACTCACCCGTGATTGCGAGCGACAGCTTGCATGCGGTCGC ACTCGACGACACCACGCTCGCAGCCGTCGATCAGTGGGCAACCAGCCGGCTGCTGTCGCGGACCGAAGCGCTCGGGCGTC TGGTGCAACTGGGGCTCAGCATCGCGCCGGGGGCACGGCCGCCGCTGGCGATCGCGCCGGACCGTGCCGTCGAACTCGCC GCGTCCCAGATTCACGCGCTGATCGATCCCGAAGCGCCGCTGGAAGAACGCGACCGACGAATCGCGCGGCTGGTCGAAGG CCCGCCGGAATTCGTCGAAGCCCGGGTCGACCTGCCGCGCCGCCGCGCCACAGATCTGCTGCCGGACGGCAACGCCATGC TGCCGCCGCCCGCGCCGGGGACGCCGCAGCGCCGCGCTACGGATCGATCAGCACTCCCGGATTGA
Upstream 100 bases:
>100_bases CGGACGCCTCAAAATGCCCGGCCTGCTGTGATTACGTGGTGGGCCGCCAAACCGAAGGTTCGGCTTTCGAAGCAGCGATC GATCGTCTAGTGCTGACAAC
Downstream 100 bases:
>100_bases GCATCGCCTGCGGATCGAGCTCGCGCTTGGCGGCGCGCAACGCGGCGGCGAACAAGTCCGGCCGCTGGCGGTCGTACCAT TTGCGATGATCGCGCCCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSDDSAPATKPTTNSPVIASDSLHAVALDDTTLAAVDQWATSRLLSRTEALGRLVQLGLSIAPGARPPLAIAPDRAVELA ASQIHALIDPEAPLEERDRRIARLVEGPPEFVEARVDLPRRRATDLLPDGNAMLPPPAPGTPQRRATDRSALPD
Sequences:
>Translated_154_residues MSDDSAPATKPTTNSPVIASDSLHAVALDDTTLAAVDQWATSRLLSRTEALGRLVQLGLSIAPGARPPLAIAPDRAVELA ASQIHALIDPEAPLEERDRRIARLVEGPPEFVEARVDLPRRRATDLLPDGNAMLPPPAPGTPQRRATDRSALPD >Mature_153_residues SDDSAPATKPTTNSPVIASDSLHAVALDDTTLAAVDQWATSRLLSRTEALGRLVQLGLSIAPGARPPLAIAPDRAVELAA SQIHALIDPEAPLEERDRRIARLVEGPPEFVEARVDLPRRRATDLLPDGNAMLPPPAPGTPQRRATDRSALPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16369; Mature: 16237
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDSAPATKPTTNSPVIASDSLHAVALDDTTLAAVDQWATSRLLSRTEALGRLVQLGLS CCCCCCCCCCCCCCCCEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IAPGARPPLAIAPDRAVELAASQIHALIDPEAPLEERDRRIARLVEGPPEFVEARVDLPR CCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCH RRATDLLPDGNAMLPPPAPGTPQRRATDRSALPD HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SDDSAPATKPTTNSPVIASDSLHAVALDDTTLAAVDQWATSRLLSRTEALGRLVQLGLS CCCCCCCCCCCCCCCEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IAPGARPPLAIAPDRAVELAASQIHALIDPEAPLEERDRRIARLVEGPPEFVEARVDLPR CCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCH RRATDLLPDGNAMLPPPAPGTPQRRATDRSALPD HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA