| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289872
Identifier: 192289872
GI number: 192289872
Start: 1546287
End: 1546442
Strand: Reverse
Name: 192289872
Synonym: Rpal_1462
Alternate gene names: NA
Gene position: 1546442-1546287 (Counterclockwise)
Preceding gene: 192289873
Following gene: 192289865
Centisome position: 26.92
GC content: 61.54
Gene sequence:
>156_bases ATGCGGCGTGTGGCGACTTGGATGCTGTACGGGATGGGCACACTCGCCTGCGCCTATCTGGCGCTGTACGCCTATGCGAT GCTGACCGCGCCGAAGCTCACCCCAGGCGATCCAATCCGCATCTTCCGCAATCCCGACGCTCCGAAATATTCGTGA
Upstream 100 bases:
>100_bases CCGGCCTCCGGGGATCATCCTGCGGCGACTGGATTTTCGTAGCTGACGATTTGACTCTGACGGCCAGATCGCCATCTTCC GCAGGCGGAGGATGAACGAG
Downstream 100 bases:
>100_bases GGCTACTTCAACCTCCTCCCGCAAGAGCGGGCGAGGGAGCCGGCCGCGGATGGAGGTGCCTTGCGTCCTCGGGCGGCGTG TCTTTCGATCTTGATATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 51; Mature: 51
Protein sequence:
>51_residues MRRVATWMLYGMGTLACAYLALYAYAMLTAPKLTPGDPIRIFRNPDAPKYS
Sequences:
>Translated_51_residues MRRVATWMLYGMGTLACAYLALYAYAMLTAPKLTPGDPIRIFRNPDAPKYS >Mature_51_residues MRRVATWMLYGMGTLACAYLALYAYAMLTAPKLTPGDPIRIFRNPDAPKYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5742; Mature: 5742
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 7.8 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 7.8 %Met (Mature Protein) 9.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVATWMLYGMGTLACAYLALYAYAMLTAPKLTPGDPIRIFRNPDAPKYS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC >Mature Secondary Structure MRRVATWMLYGMGTLACAYLALYAYAMLTAPKLTPGDPIRIFRNPDAPKYS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA