| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289688
Identifier: 192289688
GI number: 192289688
Start: 1350844
End: 1351125
Strand: Reverse
Name: 192289688
Synonym: Rpal_1278
Alternate gene names: NA
Gene position: 1351125-1350844 (Counterclockwise)
Preceding gene: 192289696
Following gene: 192289681
Centisome position: 23.52
GC content: 60.64
Gene sequence:
>282_bases ATGTCTTGCTTACGGAAATCGCTACTGATCGGTGTCGTCGTGCTGCTCGCTGCTCCGGTGCAGGCGCAGCTCTCGCCCAA TCCCCGCGCGGTCAATGATTGCACATTGCTGACAGATCCGACGGCGCTACGCCGATGCATCGAGAAGCAACAGGGCGTCA CGACCTATTCCGAAACGCCGCCACCGCGAAGCGACGTCTCACCACTGCTCAAGCGCGAGAGCGACTATTATCGGCGCAGC AAGGCTAAGAAGCCGAAGCGGAAACGCAACCGCCTGCCGTGA
Upstream 100 bases:
>100_bases CTTTCGACGGTGTGATGTTACTTTCCGCTGTTCGATTTGCGAGGTGCCGCAGCTGCAATCTTCAGATAAGGTGGTTGAAT TCGTCAGGGACTTCAACGCG
Downstream 100 bases:
>100_bases TCGGCCGTGCCGGTTCGTCGGCACGTCGGTTTCAATATGCCGTCTGCAGGATGCAGCCGCGGCCACCGGCGGCAACGGAA GCGCACAGCTCAGCTTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MSCLRKSLLIGVVVLLAAPVQAQLSPNPRAVNDCTLLTDPTALRRCIEKQQGVTTYSETPPPRSDVSPLLKRESDYYRRS KAKKPKRKRNRLP
Sequences:
>Translated_93_residues MSCLRKSLLIGVVVLLAAPVQAQLSPNPRAVNDCTLLTDPTALRRCIEKQQGVTTYSETPPPRSDVSPLLKRESDYYRRS KAKKPKRKRNRLP >Mature_92_residues SCLRKSLLIGVVVLLAAPVQAQLSPNPRAVNDCTLLTDPTALRRCIEKQQGVTTYSETPPPRSDVSPLLKRESDYYRRSK AKKPKRKRNRLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10487; Mature: 10356
Theoretical pI: Translated: 11.02; Mature: 11.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCLRKSLLIGVVVLLAAPVQAQLSPNPRAVNDCTLLTDPTALRRCIEKQQGVTTYSETP CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC PPRSDVSPLLKRESDYYRRSKAKKPKRKRNRLP CCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCC >Mature Secondary Structure SCLRKSLLIGVVVLLAAPVQAQLSPNPRAVNDCTLLTDPTALRRCIEKQQGVTTYSETP HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC PPRSDVSPLLKRESDYYRRSKAKKPKRKRNRLP CCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA